Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 0 | 0 | 0 | 0.00 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| No hit found | |||||||
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| No hit found | ||||||
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| HMCHFCLE_1 | 0.0 | 1.0 | 0.0 |
| HMCHFCLE_2 | 0.0 | 1.0 | 0.0 |
| HMCHFCLE_3 | 0.0 | 1.0 | 0.0 |
| HMCHFCLE_4 | 0.0 | 1.0 | 0.0 |
| HMCHFCLE_5 | 0.0 | 1.0 | 0.0 |
| HMCHFCLE_6 | 0.0 | 1.0 | 0.0 |
| HMCHFCLE_7 | 0.0 | 1.0 | 0.0 |
| HMCHFCLE_8 | 0.0 | 1.0 | 0.0 |
| HMCHFCLE_9 | 0.0 | 1.0 | 0.0 |
| HMCHFCLE_10 | 0.0 | 1.0 | 0.0 |
| HMCHFCLE_11 | 0.0 | 1.0 | 0.0 |
| HMCHFCLE_12 | 0.0 | 1.0 | 0.0 |
| HMCHFCLE_13 | 0.0 | 1.0 | 0.0 |
| HMCHFCLE_14 | 0.0 | 1.0 | 0.0 |
| HMCHFCLE_15 | 0.0 | 1.0 | 0.0 |
| HMCHFCLE_16 | 0.0 | 1.0 | 0.0 |
| HMCHFCLE_17 | 0.0 | 1.0 | 0.0 |
| HMCHFCLE_18 | 0.0 | 1.0 | 0.0 |
| HMCHFCLE_19 | 0.0 | 1.0 | 0.0 |
| HMCHFCLE_20 | 0.0 | 1.0 | 0.0 |
| HMCHFCLE_21 | 0.0 | 1.0 | 0.0 |
| HMCHFCLE_22 | 0.0 | 1.0 | 0.0 |
| HMCHFCLE_23 | 0.0 | 1.0 | 0.0 |
| HMCHFCLE_24 | 0.0 | 1.0 | 0.0 |
| HMCHFCLE_25 | 0.0 | 1.0 | 0.0 |
| HMCHFCLE_26 | 0.0 | 1.0 | 0.0 |
| HMCHFCLE_27 | 0.0 | 1.0 | 0.0 |
| HMCHFCLE_28 | 0.0 | 1.0 | 0.0 |
| HMCHFCLE_29 | 0.0 | 1.0 | 0.0 |
| HMCHFCLE_30 | 0.0 | 1.0 | 0.0 |
| HMCHFCLE_31 | 0.0 | 1.0 | 0.0 |
| HMCHFCLE_32 | 0.0 | 1.0 | 0.0 |
| HMCHFCLE_33 | 0.0 | 1.0 | 0.0 |
| HMCHFCLE_34 | 0.0 | 1.0 | 0.0 |
| HMCHFCLE_35 | 0.0 | 1.0 | 0.0 |
| HMCHFCLE_36 | 0.0 | 1.0 | 0.0 |
| HMCHFCLE_37 | 0.0 | 1.0 | 0.0 |
| HMCHFCLE_38 | 0.0 | 1.0 | 0.0 |
| HMCHFCLE_39 | 0.0 | 1.0 | 0.0 |
| HMCHFCLE_40 | 0.0 | 1.0 | 0.0 |
| HMCHFCLE_41 | 0.0 | 1.0 | 0.0 |
| HMCHFCLE_42 | 1.0 | 0.0 | 1.0 |
| HMCHFCLE_43 | 0.0 | 1.0 | 0.0 |
| HMCHFCLE_44 | 0.0 | 1.0 | 0.0 |
| HMCHFCLE_45 | 0.0 | 1.0 | 0.0 |
| HMCHFCLE_46 | 0.0 | 1.0 | 0.0 |
| HMCHFCLE_47 | 1.0 | 0.0 | 1.0 |
| HMCHFCLE_48 | 0.0 | 1.0 | 0.0 |
| HMCHFCLE_49 | 0.0 | 1.0 | 0.0 |
| HMCHFCLE_50 | 0.0 | 1.0 | 0.0 |
| HMCHFCLE_51 | 0.0 | 1.0 | 0.0 |
| HMCHFCLE_52 | 0.0 | 1.0 | 0.0 |
| HMCHFCLE_53 | 0.0 | 1.0 | 0.0 |
| HMCHFCLE_54 | 0.0 | 1.0 | 0.0 |
| HMCHFCLE_55 | 1.0 | 0.0 | 1.0 |
| HMCHFCLE_56 | 0.0 | 1.0 | 0.0 |
| HMCHFCLE_57 | 0.0 | 1.0 | 0.0 |
| HMCHFCLE_58 | 0.0 | 1.0 | 0.0 |
| HMCHFCLE_59 | 0.0 | 1.0 | 0.0 |
| HMCHFCLE_60 | 1.0 | 0.0 | 1.0 |
| HMCHFCLE_61 | 1.0 | 0.0 | 1.0 |
| HMCHFCLE_62 | 0.0 | 1.0 | 0.0 |
| HMCHFCLE_63 | 0.0 | 1.0 | 0.0 |
| HMCHFCLE_64 | 0.0 | 1.0 | 0.0 |
| HMCHFCLE_65 | 1.0 | 0.0 | 1.0 |
| HMCHFCLE_66 | 0.0 | 1.0 | 0.0 |
| HMCHFCLE_67 | 0.0 | 1.0 | 0.0 |
| HMCHFCLE_68 | 0.0 | 1.0 | 0.0 |
| HMCHFCLE_69 | 0.0 | 1.0 | 0.0 |
| HMCHFCLE_70 | 0.0 | 1.0 | 0.0 |
| HMCHFCLE_71 | 0.0 | 1.0 | 0.0 |
| HMCHFCLE_72 | 0.0 | 1.0 | 0.0 |
| HMCHFCLE_73 | 0.0 | 1.0 | 0.0 |
| HMCHFCLE_74 | 1.0 | 0.0 | 1.0 |
| HMCHFCLE_75 | 1.0 | 0.0 | 1.0 |
| HMCHFCLE_76 | 1.0 | 0.0 | 1.0 |
| HMCHFCLE_77 | 0.0 | 1.0 | 0.0 |
| HMCHFCLE_78 | 1.0 | 0.0 | 1.0 |
| HMCHFCLE_79 | 0.0 | 1.0 | 0.0 |
| HMCHFCLE_80 | 1.0 | 0.0 | 1.0 |
| HMCHFCLE_81 | 0.0 | 1.0 | 0.0 |
| HMCHFCLE_82 | 1.0 | 0.0 | 1.0 |
| HMCHFCLE_83 | 1.0 | 0.0 | 1.0 |
| HMCHFCLE_84 | 0.0 | 1.0 | 0.0 |
| HMCHFCLE_85 | 0.0 | 1.0 | 0.0 |
| HMCHFCLE_86 | 1.0 | 0.0 | 1.0 |
| HMCHFCLE_87 | 0.0 | 1.0 | 0.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| HMCHFCLE_2 | 43997 | 60877 | False | Myoviridae | VOG6585, |
| HMCHFCLE_9 | 162 | 22427 | False | Siphoviridae | VOG4633, |
Phigaro v2.4.0 (Database: Jan. 2024 release)