Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 0 | 0 | 2 | 2.00 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| No hit found | |||||||
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| CADKIBCJ_3 | 159482 | 160186 | WalR | 1.63e-112 | transcriptional regulatory protein | 83.40 | 100.00 | EPH95667 |
| CADKIBCJ_13 | 58735 | 58538 | CspR | 1.08e-33 | cold shock protein | 89.39 | 100.00 | AAO82613 |
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| No hit found | ||||||
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| CADKIBCJ_1 | 0.0 | 1.0 | 0.0 |
| CADKIBCJ_2 | 0.0 | 1.0 | 0.0 |
| CADKIBCJ_3 | 0.0 | 1.0 | 0.0 |
| CADKIBCJ_4 | 0.0 | 1.0 | 0.0 |
| CADKIBCJ_5 | 0.0 | 1.0 | 0.0 |
| CADKIBCJ_6 | 0.0 | 1.0 | 0.0 |
| CADKIBCJ_7 | 0.0 | 1.0 | 0.0 |
| CADKIBCJ_8 | 0.0 | 1.0 | 0.0 |
| CADKIBCJ_9 | 0.0 | 1.0 | 0.0 |
| CADKIBCJ_10 | 0.0 | 1.0 | 0.0 |
| CADKIBCJ_11 | 0.0 | 1.0 | 0.0 |
| CADKIBCJ_12 | 0.0 | 1.0 | 0.0 |
| CADKIBCJ_13 | 0.0 | 1.0 | 0.0 |
| CADKIBCJ_14 | 0.0 | 1.0 | 0.0 |
| CADKIBCJ_15 | 0.0 | 1.0 | 0.0 |
| CADKIBCJ_16 | 0.0 | 1.0 | 0.0 |
| CADKIBCJ_17 | 0.0 | 1.0 | 0.0 |
| CADKIBCJ_18 | 0.0 | 1.0 | 0.0 |
| CADKIBCJ_19 | 0.0 | 1.0 | 0.0 |
| CADKIBCJ_20 | 0.0 | 1.0 | 0.0 |
| CADKIBCJ_21 | 0.0 | 1.0 | 0.0 |
| CADKIBCJ_22 | 0.0 | 1.0 | 0.0 |
| CADKIBCJ_23 | 0.0 | 1.0 | 0.0 |
| CADKIBCJ_24 | 0.0 | 1.0 | 0.0 |
| CADKIBCJ_25 | 1.0 | 0.0 | 1.0 |
| CADKIBCJ_26 | 0.0 | 1.0 | 0.0 |
| CADKIBCJ_27 | 0.0 | 1.0 | 0.0 |
| CADKIBCJ_28 | 0.0 | 1.0 | 0.0 |
| CADKIBCJ_29 | 0.0 | 1.0 | 0.0 |
| CADKIBCJ_30 | 0.0 | 1.0 | 0.0 |
| CADKIBCJ_31 | 0.0 | 1.0 | 0.0 |
| CADKIBCJ_32 | 0.0 | 1.0 | 0.0 |
| CADKIBCJ_33 | 0.0 | 1.0 | 0.0 |
| CADKIBCJ_34 | 1.0 | 0.0 | 1.0 |
| CADKIBCJ_35 | 0.0 | 1.0 | 0.0 |
| CADKIBCJ_36 | 1.0 | 0.0 | 1.0 |
| CADKIBCJ_37 | 1.0 | 0.0 | 1.0 |
| CADKIBCJ_38 | 0.0 | 1.0 | 0.0 |
| CADKIBCJ_39 | 0.0 | 1.0 | 0.0 |
| CADKIBCJ_40 | 1.0 | 0.0 | 1.0 |
| CADKIBCJ_41 | 0.0 | 1.0 | 0.0 |
| CADKIBCJ_42 | 1.0 | 0.0 | 1.0 |
| CADKIBCJ_43 | 0.0 | 1.0 | 0.0 |
| CADKIBCJ_44 | 1.0 | 0.0 | 1.0 |
| CADKIBCJ_45 | 1.0 | 0.0 | 1.0 |
| CADKIBCJ_46 | 0.0 | 1.0 | 0.0 |
| CADKIBCJ_47 | 1.0 | 0.0 | 1.0 |
| CADKIBCJ_48 | 1.0 | 0.0 | 1.0 |
| CADKIBCJ_50 | 1.0 | 0.0 | 1.0 |
| CADKIBCJ_51 | 1.0 | 0.0 | 1.0 |
| CADKIBCJ_52 | 1.0 | 0.0 | 1.0 |
| CADKIBCJ_53 | 1.0 | 0.0 | 1.0 |
| CADKIBCJ_54 | 1.0 | 0.0 | 1.0 |
| CADKIBCJ_55 | 0.0 | 1.0 | 0.0 |
| CADKIBCJ_56 | 1.0 | 0.0 | 1.0 |
| CADKIBCJ_58 | 1.0 | 0.0 | 1.0 |
| CADKIBCJ_59 | 1.0 | 0.0 | 1.0 |
| CADKIBCJ_60 | 0.0 | 1.0 | 0.0 |
| CADKIBCJ_61 | 1.0 | 0.0 | 1.0 |
| CADKIBCJ_62 | 1.0 | 0.0 | 1.0 |
| CADKIBCJ_63 | 0.0 | 1.0 | 0.0 |
| CADKIBCJ_64 | 1.0 | 0.0 | 1.0 |
| CADKIBCJ_65 | 1.0 | 0.0 | 1.0 |
| CADKIBCJ_66 | 1.0 | 0.0 | 1.0 |
| CADKIBCJ_67 | 1.0 | 0.0 | 1.0 |
| CADKIBCJ_68 | 1.0 | 0.0 | 1.0 |
| CADKIBCJ_69 | 1.0 | 0.0 | 1.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| CADKIBCJ_3 | 82798 | 93547 | False | Siphoviridae | VOG0204, VOG4568, VOG4556, VOG5051, VOG4544, VOG4581, VOG4841, VOG0205, VOG4606, VOG4632, VOG1581 |
| CADKIBCJ_11 | 76573 | 88719 | False | Siphoviridae | VOG3304, VOG0862, VOG8520, VOG10059, VOG0181, VOG10867, VOG6450, VOG4967, VOG0321, VOG4548, VOG0322, VOG6545, VOG4632, VOG4609, VOG0327, VOG5998, VOG6795, VOG5562 |
| CADKIBCJ_13 | 4676 | 38253 | False | Siphoviridae | VOG4918, VOG0054, VOG7888, VOG7896, VOG6455, VOG4599, VOG4605, VOG0800, VOG0725, VOG0799, VOG0724, VOG5660, VOG0723, VOG4713, VOG1322, VOG1887, VOG3434, VOG4555, VOG4564, VOG0720, VOG4544, VOG0796, VOG4549, VOG4570, VOG4892, VOG0198, VOG10869, VOG4693, VOG6623, VOG9860, VOG11003, VOG8987, VOG1638, VOG6238, VOG4566, VOG0186, VOG1309, VOG8241, VOG1305, VOG6495 |
| CADKIBCJ_24 | 1320 | 11446 | False | Siphoviridae | VOG0744, VOG4693, VOG5562, VOG5998, VOG7363, VOG0189, VOG4566, VOG11003, VOG1309, VOG4600, VOG10867, VOG0181, VOG4552, VOG5353, VOG6495, VOG4602 |
Phigaro v2.4.0 (Database: Jan. 2024 release)