Search results for phylogenetically related strains

 

Rank Compare Genome ID Species Strain BioSample ID Host Allelic distance ARGs VFs PGs PPRS
1GCA_000091765.1Lactobacillus crispatus ST1ST1SAMEA2272191-0
2GCA_025194115.1Lactobacillus crispatusCIRM-BIA 523SAMN10365338-734
3GCA_965135635.1Lactobacillus crispatusCIP103602SAMEA117660302-734
4GCA_016162055.1Lactobacillus crispatusLB64SAMN15357369Gallus gallus753
5GCA_038001365.1Lactobacillus crispatusLMG 11415SAMN33861695Homo sapiens754
6GCA_002218805.1Lactobacillus crispatusUMNLC10SAMN04498982Meleagris gallopavo755
7GCA_002218895.1Lactobacillus crispatusUMNLC15SAMN04498987Meleagris gallopavo755
8GCA_008694775.1Lactobacillus crispatusNCK2487SAMN12667804turkey755
9GCA_030373605.1Lactobacillus crispatus140_Shaedl_plusKSAMN34359386Gallus gallus755
10GCA_008694765.1Lactobacillus crispatusNCK978SAMN12667801chicken756
11GCA_008694865.1Lactobacillus crispatusNCK973SAMN12667798chicken756
12GCA_008694885.1Lactobacillus crispatusNCK972SAMN12667797chicken757
13GCA_009769205.1Lactobacillus crispatusDC21.1SAMN11372136Gallus gallus757
14GCA_016162005.1Lactobacillus crispatusLB67SAMN15357372Gallus gallus757
15GCA_002218695.1Lactobacillus crispatusUMNLC6SAMN04498978Meleagris gallopavo758
16GCA_008694845.1Lactobacillus crispatusNCK974SAMN12667799chicken758
17GCA_008694935.1Lactobacillus crispatusNCK967SAMN12667794chicken758
18GCA_016161975.1Lactobacillus crispatusLB69SAMN15357374Gallus gallus759
19GCA_047782765.1Lactobacillus crispatusT31eSAMN46547635turkey759
20GCA_001704465.1Lactobacillus crispatusC25SAMN05513271Gallus gallus761
21GCA_002218775.1Lactobacillus crispatusUMNLC7SAMN04498979Meleagris gallopavo761
22GCA_008694205.1Lactobacillus crispatusNCK971SAMN12667796chicken761
23GCA_008694785.1Lactobacillus crispatusNCK988SAMN12667802chicken761
24GCA_009933525.1Lactobacillus crispatusC25SAMN13634618Gallus gallus761
25GCA_008694875.1Lactobacillus crispatusNCK977SAMN12667800chicken762
26GCA_008694925.1Lactobacillus crispatusNCK969SAMN12667795chicken762
27GCA_002218855.1Lactobacillus crispatusUMNLC12SAMN04498984Meleagris gallopavo763
28GCA_002218885.1Lactobacillus crispatusUMNLC14SAMN04498986Meleagris gallopavo764
29GCA_030212645.1Lactobacillus crispatusUMB9873SAMN34996756Homo sapiens764
30GCA_014982905.1Lactobacillus crispatusDSM 108970SAMN16401879Gallus gallus765
31GCA_007713895.1Lactobacillus crispatusNCK1350SAMN10922320Homo sapiens766
32GCA_012843585.1Lactobacillus crispatusWCA-383-APC-5ESAMN14558270Sus scrofa domesticus766
33GCA_033803605.1Lactobacillus crispatusUMB5393SAMN38148654Homo sapiens767
34GCA_033803625.1Lactobacillus crispatusUMB5409SAMN38148653Homo sapiens767
35GCA_001434005.1Lactobacillus crispatus DSM 20584 = JCM 1185 = ATCC 33820DSM 20584SAMN02369387-768
36GCA_008694755.1Lactobacillus crispatusNCK2488SAMN12667805Homo sapiens768
37GCA_018987235.1Lactobacillus crispatusATCC 33820SAMN18472633Homo sapiens768
38GCA_019537355.1Lactobacillus crispatusUBLCp-01SAMN20447867Homo sapiens768
39GCA_033803925.1Lactobacillus crispatusUMB6018SAMN38148638Homo sapiens768
40GCA_033803945.1Lactobacillus crispatusUMB6035SAMN38148636Homo sapiens768
41GCA_033803985.1Lactobacillus crispatusUMB6021SAMN38148637Homo sapiens768
42GCA_002088015.1Lactobacillus crispatusATCC 33820SAMN06624125-769
43GCA_002218685.1Lactobacillus crispatusUMNLC8SAMN04498980Meleagris gallopavo769
44GCA_002218735.1Lactobacillus crispatusUMNLC9SAMN04498981Meleagris gallopavo769
45GCA_002218815.1Lactobacillus crispatusUMNLC11SAMN04498983Meleagris gallopavo769
46GCA_002218845.1Lactobacillus crispatusUMNLC13SAMN04498985Meleagris gallopavo769
47GCA_002218925.1Lactobacillus crispatusUMNLC16SAMN04498988Meleagris gallopavo769
48GCA_013778545.1Lactobacillus crispatusDSM 29598SAMN14448840-770
49GCA_032376685.1Lactobacillus crispatusUMB4356SAMN37434649Homo sapiens770
50GCA_002218765.1Lactobacillus crispatusUMNLC5SAMN04498977Meleagris gallopavo771
51GCA_016901535.1Lactobacillus crispatusAn726SAMN14913593Gallus gallus773
52GCA_002218615.1Lactobacillus crispatusUMNLC1SAMN04498973Meleagris gallopavo775
53GCA_002811165.1Lactobacillus crispatusDISK12SAMN05770992Homo sapiens775
54GCA_002218565.1Lactobacillus crispatusUMNLC2SAMN04498974Meleagris gallopavo777
55GCA_002218645.1Lactobacillus crispatusUMNLC3SAMN04498975Meleagris gallopavo777
56GCA_002218655.1Lactobacillus crispatusUMNLC4SAMN04498976Meleagris gallopavo777
57GCA_008694975.1Lactobacillus crispatusNCK953SAMN12667793chicken777
58GCA_008694985.1Lactobacillus crispatusNCK96SAMN12667791Homo sapiens777
59GCA_019278055.1Lactobacillus crispatus8.2SAMN18809434Homo sapiens777
60GCA_019278105.1Lactobacillus crispatus5.1SAMN18809432Homo sapiens777
61GCA_019278135.1Lactobacillus crispatus7.2SAMN18809433Homo sapiens777
62GCA_009857395.1Lactobacillus crispatusIndica2SAMN13743077Homo sapiens778
63GCA_008694745.1Lactobacillus crispatusNCK1351SAMN12667803Homo sapiens779
64GCA_030213555.1Lactobacillus crispatusUMB9226SAMN34996707Homo sapiens780
65GCA_038001385.1Lactobacillus crispatusLMG 18189SAMN33861692Homo sapiens780
66GCA_013456995.1Lactobacillus crispatusB4SAMN15516019Homo sapiens781
67GCA_002861805.1Lactobacillus crispatusUMB0824SAMN08193690Homo sapiens782
68GCA_002218975.1Lactobacillus crispatusUMNLC20SAMN04498992Meleagris gallopavo783
69GCA_002219005.1Lactobacillus crispatusUMNLC21SAMN04498993Meleagris gallopavo783
70GCA_002219015.1Lactobacillus crispatusUMNLC24SAMN04498996Meleagris gallopavo784
71GCA_002219045.1Lactobacillus crispatusUMNLC22SAMN04498994Meleagris gallopavo784
72GCA_002219055.1Lactobacillus crispatusUMNLC25SAMN04498997Meleagris gallopavo784
73GCA_002219085.1Lactobacillus crispatusUMNLC23SAMN04498995Meleagris gallopavo784
74GCA_016162105.1Lactobacillus crispatusLB65SAMN15357370Gallus gallus785
75GCA_002863245.1Lactobacillus crispatusUMB0040SAMN08193691Homo sapiens786
76GCA_016162045.1Lactobacillus crispatusLB66SAMN15357371Gallus gallus787
77GCA_030230975.1Lactobacillus crispatusUMB1096ASAMN35153857Homo sapiens787
78GCA_000497065.1Lactobacillus crispatus EM-LC1EM-LC1SAMN02471465Homo sapiens788
79GCA_014654865.1Lactobacillus crispatusBC5SAMN13648610Homo sapiens788
80GCA_002861815.1Lactobacillus crispatusUMB0085SAMN08193689Homo sapiens790
81GCA_002218945.1Lactobacillus crispatusUMNLC18SAMN04498990Meleagris gallopavo791
82GCA_002218965.1Lactobacillus crispatusUMNLC19SAMN04498991Meleagris gallopavo791
83GCA_025194085.1Lactobacillus crispatusCIRM-BIA 2111SAMN10365340-792
84GCA_038001405.1Lactobacillus crispatusLMG 12003SAMN33861689Homo sapiens792
85GCA_016161925.1Lactobacillus crispatusLB70SAMN15357375Gallus gallus795
86GCA_016161995.1Lactobacillus crispatusLB68SAMN15357373Gallus gallus795
87GCA_025194105.1Lactobacillus crispatusCIRM-BIA 2112SAMN10365339-796
88GCA_040109495.1Lactobacillus crispatusBC1SAMN41005275-796
89GCA_008868575.1Lactobacillus crispatusBIO6272SAMN12856537Homo sapiens798
90GCA_038001425.1Lactobacillus crispatusLMG 12005SAMN33861690Homo sapiens799
91GCA_038001465.1Lactobacillus crispatusLMG11440SAMN33861691Homo sapiens799
92GCA_008694965.1Lactobacillus crispatusNCK777SAMN12667792-803
93GCA_032376945.1Lactobacillus crispatusUMB5661SAMN37434658Homo sapiens803
94GCA_030214445.1Lactobacillus crispatusUMB8789SAMN34996665Homo sapiens804
95GCA_032376885.1Lactobacillus crispatusUMB6244SAMN37434651Homo sapiens804
96GCA_038001325.1Lactobacillus crispatusLMG 18200SAMN33861694Homo sapiens817
97GCA_001541385.1Lactobacillus crispatusVMC3SAMN03893601Homo sapiens821
98GCA_038001345.1Lactobacillus crispatusLMG 18199SAMN33861693Homo sapiens822
99GCA_013487905.1Lactobacillus crispatus1DSAMN13624824Equus caballus826
100GCA_001541405.1Lactobacillus crispatusVMC4SAMN03893602Homo sapiens827