Search results for phylogenetically related strains

 

Rank Compare Genome ID Species Strain BioSample ID Host Allelic distance ARGs VFs PGs PPRS
1GCA_000410015.1Lacticaseibacillus paracasei subsp. paracasei Lpp221Lpp221SAMN02469717Homo sapiens0
2GCA_026797475.1Lacticaseibacillus paracaseiCBP-1042SAMN27675067-258
3GCA_028878305.1Lacticaseibacillus paracaseiNRRL B-456SAMN23708197-258
4GCA_037283385.1Lacticaseibacillus paracaseiNRC_P4SAMN32629231cow260
5GCA_025190725.1Lacticaseibacillus paracaseiCIRM-BIA 699SAMN10365439-261
6GCA_016887785.1Lacticaseibacillus paracasei2306SAMN17562096-262
7GCA_003712565.1Lacticaseibacillus paracaseiFAM19317SAMN04088878-263
8GCA_003712985.1Lacticaseibacillus paracaseiFAM8140SAMN04088895-265
9GCA_030710015.1Lacticaseibacillus paracaseiULE721SAMN33593465-271
10GCA_025190525.1Lacticaseibacillus paracaseiCIRM-BIA 1517SAMN10365450-272
11GCA_000410195.1Lacticaseibacillus paracasei subsp. paracasei Lpp219Lpp219SAMN02469710Homo sapiens284
12GCA_000309665.1Lacticaseibacillus paracaseiM36SAMN02472000-287
13GCA_049201625.1Lacticaseibacillus paracaseiUBLPc-87SAMN47217620-299
14GCA_003712245.1Lacticaseibacillus paracaseiFAM18108SAMN04088862-305
15GCA_000410055.1Lacticaseibacillus paracasei subsp. paracasei Lpp227Lpp227SAMN02641494Homo sapiens316
16GCA_002148805.1Lacticaseibacillus paracaseiDPC4206SAMN06220137-318
17GCA_002148885.1Lacticaseibacillus paracaseiDPC4536SAMN06463780-318
18GCA_003434205.1Lacticaseibacillus paracaseiAM33-2ACSAMN09736452Homo sapiens318
19GCA_016757675.1Lacticaseibacillus paracasei subsp. toleransS-NA5SAMN17359331-318
20GCA_024498315.1Lacticaseibacillus paracaseiSMN-LBKSAMN29933592-318
21GCA_024622515.1Lacticaseibacillus paracaseiDSM 28675SAMN29593134Mus musculus318
22GCA_028320385.1Lacticaseibacillus paracasei1001270st1_F8_1001270H_150608SAMN31322638Homo sapiens318
23GCA_035586595.1Lacticaseibacillus paracaseiHP-B1337SAMN38922877-318
24GCA_036281375.1Lacticaseibacillus paracaseiCUL07ASAMN09708453-318
25GCA_040785095.1Lacticaseibacillus paracaseigbc_fSAMN41082101-318
26GCA_041283745.2Lacticaseibacillus paracaseiORD 0998SAMN43000418Homo sapiens318
27GCA_045808845.1Lacticaseibacillus paracaseiMSR2SAMN45146297-318
28GCA_049191845.1Lacticaseibacillus paracaseiIATA110SAMN45053973Homo sapiens318
29GCA_049205075.1Lacticaseibacillus paracaseiIATA109SAMN45053972Homo sapiens318
30GCA_016757695.1Lacticaseibacillus paracasei subsp. toleransS-NBSAMN17359333-319
31GCA_000309785.1Lacticaseibacillus paracaseiLpc-37SAMN02472013-320
32GCA_048282615.1Lacticaseibacillus paracasei439SAMN46889214-320
33GCA_000410235.1Lacticaseibacillus paracasei subsp. paracasei Lpp74Lpp74SAMN02469728-331
34GCA_015693945.1Lacticaseibacillus paracasei subsp. toleransZY-1SAMN16861159-367
35GCA_034044075.1Lacticaseibacillus paracaseiMP11ASAMN37950489-394
36GCA_003712965.1Lacticaseibacillus paracaseiFAM6410SAMN04088893-395
37GCA_025190565.1Lacticaseibacillus paracaseiCIRM-BIA 2128SAMN10365446-395
38GCA_037414215.1Lacticaseibacillus paracaseiLPC100SAMN39212581Homo sapiens395
39GCA_008369945.1Lacticaseibacillus paracaseiDTA93SAMN12661681Homo sapiens412
40GCA_026967245.1Lacticaseibacillus paracaseiLpc_yogurt_B6SAMN32062179-418
41GCA_041117985.1Lacticaseibacillus paracaseiMYA5SAMN42930119-418
42GCA_026967195.1Lacticaseibacillus paracaseiLpc_yogurt_B5SAMN32062178-419
43GCA_026967205.1Lacticaseibacillus paracaseiLpc_yogurt_B4SAMN32062177-419
44GCA_026967275.1Lacticaseibacillus paracaseiLpc_yogurt_B3SAMN32062176-419
45GCA_026967295.1Lacticaseibacillus paracaseiLpc_yogurt_B2SAMN32062175-419
46GCA_041679805.1Lacticaseibacillus paracaseiAPYSAMN41163063Homo sapiens419
47GCA_009996805.1Lacticaseibacillus paracaseiD3-5SAMN13905290Homo sapiens420
48GCA_004141835.1Lacticaseibacillus paracaseiSRCM103299SAMN10849469-423
49GCA_000410075.1Lacticaseibacillus paracasei subsp. paracasei CNCM I-4648CNCM I-4648SAMN03177793-451
50GCA_016890245.1Lacticaseibacillus paracaseiYT170SAMN17818118Rex rabbit455
51GCA_025757505.1Lacticaseibacillus paracaseiNG-LCU-ST2SAMN31037893Maize455
52GCA_042015765.1Lacticaseibacillus paracaseiZJUZ2-3SAMN43503360Homo sapiens460
53GCA_013307125.1Lacticaseibacillus paracaseiLp02SAMN11489091Homo sapiens463
54GCA_015476175.1Lacticaseibacillus paracasei subsp. toleransMGB0747SAMN16668663-467
55GCA_015476195.1Lacticaseibacillus paracasei subsp. toleransMGB0761SAMN16668817-468
56GCA_019990865.1Lacticaseibacillus paracaseicek-R2SAMN21367938beet468
57GCA_017638905.1Lacticaseibacillus paracaseiHL182SAMN18236778Homo sapiens469
58GCA_028878105.1Lacticaseibacillus paracaseiTMW 1.300SAMN23708206-470
59GCA_002904305.1Lacticaseibacillus paracaseiCCC B1205SAMN03813856-471
60GCA_001244395.1Lacticaseibacillus paracaseiL9SAMN03853751Homo sapiens475
61GCA_008329845.1Lacticaseibacillus paracasei10266SAMN09874024Homo sapiens475
62GCA_009931715.1Lacticaseibacillus paracaseiCACC 566SAMN13871807Canine475
63GCA_012955485.1Lacticaseibacillus paracasei347-16SAMN13259076Homo sapiens475
64GCA_028322945.1Lacticaseibacillus paracasei1001295st1_G5_1001295H_181012SAMN31322639Homo sapiens475
65GCA_029906365.1Lacticaseibacillus paracasei subsp. paracaseiMI3SAMN34106059Homo sapiens475
66GCA_024637915.1Lacticaseibacillus paracaseiVHProbi F11SAMN27160580Homo sapiens476
67GCA_037283365.1Lacticaseibacillus paracaseiNRC_P5SAMN32629232buffalo476
68GCA_037283435.1Lacticaseibacillus paracaseiNRC_P6SAMN32629233buffalo476
69GCA_037283545.1Lacticaseibacillus paracaseiNRC_P3SAMN32629230cow476
70GCA_029625355.1Lacticaseibacillus paracaseiVHProbi OF10SAMN26144441-478
71GCA_000309685.1Lacticaseibacillus paracaseiT71499SAMN02472001Homo sapiens479
72GCA_026013725.1Lacticaseibacillus paracaseiATG-E1SAMN31433209Hono sapiens479
73GCA_000410455.1Lacticaseibacillus paracasei subsp. paracasei Lpp43Lpp43SAMN02469725-480
74GCA_007637635.1Lacticaseibacillus paracaseiNJSAMN12319598-480
75GCA_030360845.1Lacticaseibacillus paracaseiTOM.1339SAMN35776905-480
76GCA_036762895.1Lacticaseibacillus paracasei1311_IL3157SAMN37904766animal480
77GCA_030480425.1Lacticaseibacillus paracaseiL14SAMN33263285-483
78GCA_003966835.1Lacticaseibacillus paracasei-SAMD00094822-484
79GCA_002079285.1Lacticaseibacillus paracaseiIIASAMN04571918-488
80GCA_003640765.1Lacticaseibacillus paracaseiUBLPC-35SAMN10147909-494
81GCA_036430865.1Lacticaseibacillus paracaseiFI11579SAMN33193087-503
82GCA_002257625.1Lacticaseibacillus paracaseiTK1501SAMN05921089-509
83GCA_046939035.1Lacticaseibacillus paracasei subsp. paracaseiM587ASAMN35847929wild boar516
84GCA_025252385.1Lacticaseibacillus paracaseiVHProbi O44SAMN30550144Homo sapiens517
85GCA_032229185.1Lacticaseibacillus paracaseiNC4SAMN37472141-522
86GCA_036431975.1Lacticaseibacillus paracaseiCMAN-SucSAMN35624267-526
87GCA_008868525.1Lacticaseibacillus paracaseiBIO5452SAMN12856540-530
88GCA_025190765.1Lacticaseibacillus paracaseiCIRM-BIA 1511SAMN10365436-530
89GCA_036432035.1Lacticaseibacillus paracaseiLMAN-KhSAMN35624263-537
90GCA_025215665.1Lacticaseibacillus paracaseiALAC-4SAMN10688387-549
91GCA_025190665.1Lacticaseibacillus paracaseiCIRM-BIA 655SAMN10365443-553
92GCA_000410435.1Lacticaseibacillus paracasei subsp. paracasei CNCM I-4649CNCM I-4649SAMN02469704-564
93GCA_000409835.1Lacticaseibacillus paracasei subsp. tolerans Lpl7Lpl7SAMN02469714-570
94GCA_039615445.1Lacticaseibacillus paracaseiNKM 5.4SAMN41068727-571
95GCA_000410335.1Lacticaseibacillus paracasei subsp. tolerans Lpl14Lpl14SAMN02469703-572
96GCA_001540885.1Lacticaseibacillus paracaseiLc1542SAMN03702539bovine575
97GCA_028609725.1Lacticaseibacillus paracaseiCLP-C10SAMN14677579-575
98GCA_015476135.1Lacticaseibacillus paracasei subsp. toleransMGB0734SAMN16667758-576
99GCA_000410095.1Lacticaseibacillus paracasei subsp. paracasei CNCM I-2877CNCM I-2877SAMN02641492-577
100GCA_000736295.5Lacticaseibacillus paracaseiLbs2SAMN02910029Homo sapiens578