Search results for phylogenetically related strains

 

Rank Compare Genome ID Species Strain BioSample ID Host Allelic distance ARGs VFs PGs PPRS
1GCA_000958485.1Lacticaseibacillus paracasei NRIC 1981-SAMD00000558-0
2GCA_024717335.1Lacticaseibacillus paracaseiVHProbi M56SAMN27162336Homo sapiens128
3GCA_037966745.1Lacticaseibacillus paracaseiATA-LTC-Lp040802SAMN40643417Homo sapiens128
4GCA_038025045.1Lacticaseibacillus paracaseiATA-LTC-Lp121000SAMN40643419animal129
5GCA_040430295.1Lacticaseibacillus paracaseiATA-LTC-Lp041103SAMN41784243Animal134
6GCA_009739485.1Lacticaseibacillus paracasei subsp. paracaseiIBB3423SAMN07167770-142
7GCA_000474615.1Lacticaseibacillus paracasei5bSAMN02470054-148
8GCA_003712795.1Lacticaseibacillus paracaseiFAM4067SAMN04088889-148
9GCA_002914885.1Lacticaseibacillus paracaseiBP07SAMN07187783-157
10GCA_000309765.1Lacticaseibacillus paracaseiLc-10SAMN02472012-158
11GCA_003712225.1Lacticaseibacillus paracaseiFAM10859SAMN04088858-165
12GCA_029906315.1Lacticaseibacillus paracasei subsp. paracaseiMI29SAMN34105739Homo sapiens190
13GCA_002813615.1Lacticaseibacillus paracasei subsp. paracaseiTMW 1.1434SAMN05356834-194
14GCA_025190495.1Lacticaseibacillus paracaseiCIRM-BIA 288SAMN10365452-196
15GCA_002901165.3Lacticaseibacillus paracasei subsp. paracaseiNTU 101SAMN07445234Homo sapiens275
16GCA_003712645.1Lacticaseibacillus paracaseiFAM22276SAMN04088881-275
17GCA_003712935.1Lacticaseibacillus paracaseiFAM3248SAMN04088887-275
18GCA_003712295.1Lacticaseibacillus paracaseiFAM18099SAMN04088859-480
19GCA_002406665.1Lacticaseibacillus paracaseiB3SAMN07665582-481
20GCA_035330705.1Lacticaseibacillus paracaseiS135-24WSAMN38650142Homo sapiens483
21GCA_030540905.1Lacticaseibacillus paracasei11wSAMN36403201-509
22GCA_003712835.1Lacticaseibacillus paracaseiFAM8407SAMN04088897-535
23GCA_003712245.1Lacticaseibacillus paracaseiFAM18108SAMN04088862-539
24GCA_034044075.1Lacticaseibacillus paracaseiMP11ASAMN37950489-570
25GCA_003712665.1Lacticaseibacillus paracaseiFAM22277SAMN04088882-579
26GCA_018917305.1Lacticaseibacillus paracaseiN53SAMN19374054Macaca fascicularis594
27GCA_000410075.1Lacticaseibacillus paracasei subsp. paracasei CNCM I-4648CNCM I-4648SAMN03177793-596
28GCA_003367655.1Lacticaseibacillus paracasei subsp. paracaseiKMB_598SAMN09398938-600
29GCA_039615415.1Lacticaseibacillus paracaseiTBM 27SAMN41068605-603
30GCA_031630235.1Lacticaseibacillus paracasei69BisSAMN30173654goat610
31GCA_028993835.1Lacticaseibacillus paracaseiARN1SAMN33449985bacteria619
32GCA_036762785.1Lacticaseibacillus paracasei1571-2_IL3211SAMN37904772animal622
33GCA_036762765.1Lacticaseibacillus paracasei1567_IL3212SAMN37904769animal623
34GCA_005049135.1Lacticaseibacillus paracaseiS49SAMN11456259Bos taurus631
35GCA_018257175.1Lacticaseibacillus paracaseiDm-2019-60SAMN17146146Drosophila melanogaster631
36GCA_044740695.1Lacticaseibacillus paracaseiE11.5SAMN44487087-631
37GCA_047785155.1Lacticaseibacillus paracaseiSRCM212209SAMN46082883-631
38GCA_000410175.1Lacticaseibacillus paracasei subsp. paracasei Lpp225Lpp225SAMN02469715-632
39GCA_018729425.1Lacticaseibacillus paracaseiMYD3SAMN16551136-632
40GCA_025137495.1Lacticaseibacillus paracaseiL1SAMN20355457-632
41GCA_028878355.1Lacticaseibacillus paracaseiLMG 25883SAMN23708195-632
42GCA_000019245.3Lacticaseibacillus paracaseiZhangSAMN02603933-633
43GCA_022819265.1Lacticaseibacillus paracaseiSCB0563SAMN26885627-633
44GCA_025190685.1Lacticaseibacillus paracaseiCIRM-BIA 1445SAMN10365442-633
45GCA_021650835.1Lacticaseibacillus paracasei subsp. paracaseiGR0562SAMN25145123Homo sapiens634
46GCA_028878315.1Lacticaseibacillus paracaseiDSM 4905SAMN23708196Homo sapiens634
47GCA_033815995.1Lacticaseibacillus paracaseiYE01SAMN37887709-634
48GCA_015476155.1Lacticaseibacillus paracasei subsp. toleransMGB0625SAMN16668564-636
49GCA_039615445.1Lacticaseibacillus paracaseiNKM 5.4SAMN41068727-637
50GCA_003712785.1Lacticaseibacillus paracaseiFAM6161SAMN04088891-638
51GCA_015476075.1Lacticaseibacillus paracasei subsp. toleransMGB0245SAMN16657550-638
52GCA_025252385.1Lacticaseibacillus paracaseiVHProbi O44SAMN30550144Homo sapiens638
53GCA_028609725.1Lacticaseibacillus paracaseiCLP-C10SAMN14677579-638
54GCA_030361365.1Lacticaseibacillus paracaseiTOM.9SAMN35776875-638
55GCA_031348425.1Lacticaseibacillus paracaseiKCKM 0245SAMN37235621-638
56GCA_040822445.1Lacticaseibacillus paracasei subsp. paracaseiBS2-PB5SAMN42029631Homo sapiens638
57GCA_003713005.1Lacticaseibacillus paracaseiFAM7821SAMN04088894-639
58GCA_031461095.1Lacticaseibacillus paracaseiKCKM 0992SAMN37256209-639
59GCA_046939035.1Lacticaseibacillus paracasei subsp. paracaseiM587ASAMN35847929wild boar639
60GCA_000026485.1Lacticaseibacillus paracaseiBL23SAMEA2272724-641
61GCA_001895185.1Lacticaseibacillus paracasei-SAMD00029052-641
62GCA_023656965.1Lacticaseibacillus paracaseiATCC 27092SAMN11309554Homo sapiens641
63GCA_030061895.1Lacticaseibacillus paracaseiGM-080SAMN27485237Homo sapiens641
64GCA_044990665.1Lacticaseibacillus paracaseiFNCPS K7SAMN44657157-641
65GCA_965138865.1Lacticaseibacillus paracaseiCIP109805SAMEA117660480-641
66GCA_000194785.1Lacticaseibacillus paracaseiLC2WSAMN02603877-642
67GCA_000309665.1Lacticaseibacillus paracaseiM36SAMN02472000-642
68GCA_000410135.1Lacticaseibacillus paracasei subsp. paracasei Lpp17Lpp17SAMN02469707-642
69GCA_000410415.1Lacticaseibacillus paracasei subsp. paracasei Lpp37Lpp37SAMN02469718Homo sapiens642
70GCA_007292115.1Lacticaseibacillus paracaseiCBA3611SAMN11890849Homo sapiens642
71GCA_011031945.1Lacticaseibacillus paracaseiVA02-1ANSAMN14087235Homo sapiens642
72GCA_025660485.1Lacticaseibacillus paracaseiPB5SAMN31096048-642
73GCA_028206475.1Lacticaseibacillus paracaseiSRCM217440SAMN32670666-642
74GCA_028320445.1Lacticaseibacillus paracasei1001095st2_H2_1025SCRN_200924SAMN31322629Homo sapiens642
75GCA_028321445.1Lacticaseibacillus paracasei1001095st2_D7_1025SCRN_200924SAMN31322627Homo sapiens642
76GCA_039650495.1Lacticaseibacillus paracaseiDDS12SAMN41053268-642
77GCA_041734755.1Lacticaseibacillus paracaseiYGRT25SAMN43028910-642
78GCA_042657205.1Lacticaseibacillus paracaseiL45SAMN43851867Human (Breastfed infant)642
79GCA_000194765.1Lacticaseibacillus paracaseiBD-IISAMN02603876-643
80GCA_002849575.1Lacticaseibacillus paracaseiDUP 13076SAMN08239980-643
81GCA_003957435.1Lacticaseibacillus paracasei subsp. toleransAO356SAMN08200884-643
82GCA_024665815.1Lacticaseibacillus paracasei subsp. paracasei01SAMN29862210Homo sapiens643
83GCA_024999945.1Lacticaseibacillus paracasei88SAMN10365669-643
84GCA_025190575.1Lacticaseibacillus paracaseiCIRM-BIA 770SAMN10365448-643
85GCA_025190635.1Lacticaseibacillus paracaseiCIRM-BIA 1444SAMN10365444-643
86GCA_025190665.1Lacticaseibacillus paracaseiCIRM-BIA 655SAMN10365443-643
87GCA_025190705.1Lacticaseibacillus paracaseiCIRM-BIA 2130SAMN10365441-643
88GCA_025631055.1Lacticaseibacillus paracaseiPB6SAMN31096049-643
89GCA_028878155.1Lacticaseibacillus paracaseiDIALYacSAMN23708207-643
90GCA_032290425.1Lacticaseibacillus paracaseiASM82903v1SAMN37553482Homo sapiens643
91GCA_000318035.1Lacticaseibacillus paracaseiW56SAMEA2271945-644
92GCA_015319235.1Lacticaseibacillus paracasei subsp. toleransMGB0543SAMN16657553-644
93GCA_022478075.1Lacticaseibacillus paracaseiVHProbi F22SAMN23765140-644
94GCA_022614635.1Lacticaseibacillus paracaseiGMNL-855SAMN22548462Homo sapiens644
95GCA_025215665.1Lacticaseibacillus paracaseiALAC-4SAMN10688387-644
96GCA_000409955.1Lacticaseibacillus paracasei subsp. paracasei Lpp223Lpp223SAMN02469706Homo sapiens645
97GCA_004078565.1Lacticaseibacillus paracaseiSRCM103424SAMN10743383-645
98GCA_012932835.1Lacticaseibacillus paracaseiCRF28SAMN05660651-645
99GCA_033447265.1Lacticaseibacillus paracaseiMCC 0258SAMN38085101-645
100GCA_039838605.1Lacticaseibacillus paracasei1001095st2_F6_1025SCRN_200924SAMN31322628Homo sapiens645