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Rank	Genome ID	Species	Strain	BioSample ID	Host	Allelic distance	ARGs	VFs	PGs	PPRS
1	GCA_001264155.1	Bifidobacterium breve MCC 1604	MCC 1604	SAMN03978800	Homo sapiens	0	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
2	GCA_003370155.1	Bifidobacterium breve	12-4	SAMN07189840	Homo sapiens	892	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
3	GCA_002838545.1	Bifidobacterium breve	082W48	SAMN06828932	Homo sapiens	942	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
4	GCA_002838465.1	Bifidobacterium breve	017W439	SAMN06828931	Homo sapiens	950	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
5	GCA_001264035.1	Bifidobacterium breve MCC 0305	MCC 0305	SAMN03978801	Homo sapiens	991	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
6	GCA_028203585.1	Bifidobacterium breve	2217st1_B10_2217SCRN_200827	SAMN31321423	Homo sapiens	1010	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
7	GCA_039912975.1	Bifidobacterium breve	2217st1_C9_2217SCRN_200827	SAMN31321424	Homo sapiens	1011	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
8	GCA_002838525.1	Bifidobacterium breve	180W83	SAMN06829003	Homo sapiens	1038	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
9	GCA_028203305.1	Bifidobacterium breve	J1100826st1_F9_J1100826_190719	SAMN31321430	Homo sapiens	1040	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
10	GCA_028203435.1	Bifidobacterium breve	J1100826st1_F12_J1100826_190719	SAMN31321429	Homo sapiens	1040	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
11	GCA_028201795.1	Bifidobacterium breve	J1100826st1_H11_J1100826_190719	SAMN31321431	Homo sapiens	1041	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
12	GCA_028201755.1	Bifidobacterium breve	J1100826st1_H2_J1100826_190719	SAMN31321432	Homo sapiens	1042	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
13	GCA_028203415.1	Bifidobacterium breve	J1101312st1_H6_J1101312_190322	SAMN31321434	Homo sapiens	1045	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
14	GCA_028201775.1	Bifidobacterium breve	J1101312st1_E4_J1101312_190322	SAMN31321433	Homo sapiens	1046	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
15	GCA_901980275.1	Bifidobacterium breve	INIA P734	SAMEA5675151	Homo sapiens	1056	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
16	GCA_030230575.1	Bifidobacterium breve	UMB1343A	SAMN35153882	Homo sapiens	1063	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
17	GCA_000569035.1	Bifidobacterium breve NCFB 2258	NCFB 2258	SAMN03081481	-	1065	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
18	GCA_009931415.1	Bifidobacterium breve	JR01	SAMN09977286	Homo sapiens	1066	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
19	GCA_024665435.1	Bifidobacterium breve	BIF195	SAMN29862206	Homo sapiens	1066	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
20	GCA_002838605.1	Bifidobacterium breve	NRBB18	SAMN07160576	Homo sapiens	1067	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
21	GCA_002838645.1	Bifidobacterium breve	NRBB20	SAMN07160580	Homo sapiens	1067	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
22	GCA_002838665.1	Bifidobacterium breve	NRBB27	SAMN07160976	Homo sapiens	1067	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
23	GCA_002838685.1	Bifidobacterium breve	NRBB49	SAMN07160977	Homo sapiens	1067	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
24	GCA_002838265.1	Bifidobacterium breve	NRBB02	SAMN06827019	Homo sapiens	1068	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
25	GCA_002838285.1	Bifidobacterium breve	NRBB04	SAMN06827050	Homo sapiens	1068	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
26	GCA_002838745.1	Bifidobacterium breve	NRBB08	SAMN07160574	Homo sapiens	1068	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
27	GCA_002838625.1	Bifidobacterium breve	NRBB19	SAMN07160980	Homo sapiens	1069	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
28	GCA_001264095.1	Bifidobacterium breve MCC 1094	MCC 1094	SAMN03978802	Homo sapiens	1084	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
29	GCA_029723715.1	Bifidobacterium breve	LH_989	SAMN24838599	Homo sapiens	1086	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
30	GCA_006546585.1	Bifidobacterium breve	SC95	SAMN12108292	Homo sapiens	1087	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
31	GCA_028201875.1	Bifidobacterium breve	BSD2780061687st1_C6_BSD2780061687_150420	SAMN31321425	Homo sapiens	1088	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
32	GCA_028203385.1	Bifidobacterium breve	BSD2780061687st1_H11_BSD2780061687_150420	SAMN31321428	Homo sapiens	1088	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
33	GCA_028201785.1	Bifidobacterium breve	BSD2780061687st1_F3_BSD3448080968_160620	SAMN31321427	Homo sapiens	1091	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
34	GCA_028201855.1	Bifidobacterium breve	BSD2780061687st1_C6_BSD3448080968_160620	SAMN31321426	Homo sapiens	1091	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
35	GCA_049191365.1	Bifidobacterium breve	IATA136	SAMN45053982	Homo sapiens	1092	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
36	GCA_000569055.1	Bifidobacterium breve 689b	689b	SAMN03081482	-	1094	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
37	GCA_030216945.1	Bifidobacterium breve	UMB5641	SAMN34996542	Homo sapiens	1094	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
38	GCA_039912955.1	Bifidobacterium breve	1001285st1_E7_1001285H_161024	SAMN31321421	Homo sapiens	1095	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
39	GCA_002838485.1	Bifidobacterium breve	215W447a	SAMN06829004	Homo sapiens	1096	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
40	GCA_001546235.1	Bifidobacterium breve	GED8481	SAMN03842221	Homo sapiens	1098	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
41	GCA_002838565.1	Bifidobacterium breve	139W423	SAMN06829002	Homo sapiens	1098	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
42	GCA_027212705.1	Bifidobacterium breve	SDS-736-OW	SAMN32244232	Homo sapiens	1098	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
43	GCA_027214545.1	Bifidobacterium breve	SDS-734-OW	SAMN32244261	Homo sapiens	1098	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
44	GCA_027214935.1	Bifidobacterium breve	SDS-1059-dR	SAMN32244248	Homo sapiens	1098	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
45	GCA_027215655.1	Bifidobacterium breve	SDS-1060-OWr	SAMN32244239	Homo sapiens	1098	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
46	GCA_000569075.1	Bifidobacterium breve S27	S27	SAMN03081483	-	1099	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
47	GCA_002271275.1	Bifidobacterium breve	7E	SAMN05933031	Homo sapiens	1099	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
48	GCA_027212715.1	Bifidobacterium breve	SDS-967-OWr	SAMN32244254	Homo sapiens	1099	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
49	GCA_027212825.1	Bifidobacterium breve	SDS-968-OWr	SAMN32244256	Homo sapiens	1099	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
50	GCA_027214765.1	Bifidobacterium breve	SDS-512-W	SAMN32244243	Homo sapiens	1099	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
51	GCA_027214905.1	Bifidobacterium breve	SDS-1057-dR	SAMN32244233	Homo sapiens	1099	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
52	GCA_027215105.1	Bifidobacterium breve	SDS-965-OWr	SAMN32244241	Homo sapiens	1099	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
53	GCA_030216845.1	Bifidobacterium breve	UMB6370	SAMN34996547	Homo sapiens	1099	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
54	GCA_000466545.1	Bifidobacterium breve JCP7499	JCP7499	SAMN02436887	Homo sapiens	1100	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
55	GCA_009498435.1	Bifidobacterium breve	JSRL01	SAMN13135167	-	1100	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
56	GCA_027214925.1	Bifidobacterium breve	SDS-1919-OWr1	SAMN32244250	Homo sapiens	1100	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
57	GCA_027215465.1	Bifidobacterium breve	SDS-1920-OWr1	SAMN32244266	Homo sapiens	1100	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
58	GCA_027215475.1	Bifidobacterium breve	SDS-1921-OWr1	SAMN32244247	Homo sapiens	1100	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
59	GCA_029723405.1	Bifidobacterium breve	LH_1052	SAMN24838611	Homo sapiens	1100	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
60	GCA_902505445.1	Bifidobacterium breve	-	SAMEA4838173	-	1100	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
61	GCA_902505485.1	Bifidobacterium breve	-	SAMEA4838172	-	1100	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
62	GCA_027212575.1	Bifidobacterium breve	SDS-512-OW	SAMN32244242	Homo sapiens	1101	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
63	GCA_027214635.1	Bifidobacterium breve	SDS-511-OW	SAMN32244260	Homo sapiens	1101	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
64	GCA_027214985.1	Bifidobacterium breve	SDS-509-OW	SAMN32244249	Homo sapiens	1101	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
65	GCA_029340075.1	Bifidobacterium breve	RC158_19046_CD	SAMN32756521	Homo sapiens	1102	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
66	GCA_003370125.1	Bifidobacterium breve	W20-13	SAMN07189841	Homo sapiens	1104	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
67	GCA_000247755.2	Bifidobacterium breve CECT 7263	CECT 7263	SAMN02471362	Homo sapiens	1105	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
68	GCA_002027265.1	Bifidobacterium breve	CECT7263	SAMN06473336	Homo sapiens	1106	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
69	GCA_002075865.1	Bifidobacterium breve	1900B	SAMN06621718	Homo sapiens	1106	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
70	GCA_003370265.1	Bifidobacterium breve	W56	SAMN07189842	Homo sapiens	1108	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
71	GCA_002914865.1	Bifidobacterium breve	BB02	SAMN07187787	-	1110	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
72	GCA_028201915.1	Bifidobacterium breve	1001274st1_H8_1001274B_151102	SAMN31321420	Homo sapiens	1110	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
73	GCA_030219005.1	Bifidobacterium breve	UMB0002	SAMN34996433	Homo sapiens	1110	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
74	GCA_049191505.1	Bifidobacterium breve	IATA027	SAMN45053948	Homo sapiens	1110	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
75	GCA_002838405.1	Bifidobacterium breve	NRBB51	SAMN06827096	Homo sapiens	1111	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
76	GCA_000568875.1	Bifidobacterium breve 31L	31L	SAMN02951889	Homo sapiens	1112	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
77	GCA_000213865.1	Bifidobacterium breve ACS-071-V-Sch8b	ACS-071-V-Sch8b	SAMN00100758	Homo sapiens	1113	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
78	GCA_028201765.1	Bifidobacterium breve	1001274st1_G4_1001274B_151102	SAMN31321419	Homo sapiens	1113	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
79	GCA_000220135.1	Bifidobacterium breve UCC2003	UCC2003	SAMN02604112	-	1114	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
80	GCA_009429085.1	Bifidobacterium breve	IDCC4401	SAMN13091495	Homo sapiens	1114	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
81	GCA_029723755.1	Bifidobacterium breve	LH_1004	SAMN24838601	Homo sapiens	1114	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
82	GCA_029723395.1	Bifidobacterium breve	LH_1047	SAMN24838609	Homo sapiens	1115	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
83	GCA_049191355.1	Bifidobacterium breve	IATA131	SAMN45053980	Homo sapiens	1116	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
84	GCA_049191465.1	Bifidobacterium breve	IATA048	SAMN45053954	Homo sapiens	1117	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
85	GCA_049205315.1	Bifidobacterium breve	IATA077	SAMN45053959	Homo sapiens	1117	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
86	GCA_002838345.1	Bifidobacterium breve	NRBB57	SAMN06827912	Homo sapiens	1118	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
87	GCA_002838585.1	Bifidobacterium breve	CNCM I-4321	SAMN06827913	Homo sapiens	1118	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
88	GCA_002838725.1	Bifidobacterium breve	DRBB30	SAMN07160979	Homo sapiens	1118	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
89	GCA_001263845.1	Bifidobacterium breve MCC 0476	MCC 0476	SAMN03978797	Homo sapiens	1119	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
90	GCA_002076075.1	Bifidobacterium breve	1889B	SAMN06621709	Homo sapiens	1119	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
91	GCA_003370175.1	Bifidobacterium breve	322-1	SAMN07189839	Homo sapiens	1119	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
92	GCA_900102865.1	Bifidobacterium breve	RP2	SAMN05216468	-	1125	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
93	GCA_000411435.1	Bifidobacterium breve HPH0326	HPH0326	SAMN02596976	-	1126	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
94	GCA_047301025.1	Bifidobacterium breve	JKL2022	SAMN30403323	-	1126	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
95	GCA_000568975.1	Bifidobacterium breve JCM 7017	JCM 7017	SAMN03081479	-	1127	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
96	GCA_001264135.1	Bifidobacterium breve MCC 1454	MCC 1454	SAMN03978804	Homo sapiens	1128	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
97	GCA_002838385.1	Bifidobacterium breve	NRBB52	SAMN06827097	Homo sapiens	1128	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
98	GCA_049204755.1	Bifidobacterium breve	IATA153	SAMN45053990	Homo sapiens	1128	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
99	GCA_040367695.1	Bifidobacterium breve	-	SAMD00644048	-	1131	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
100	GCA_000158015.1	Bifidobacterium breve DSM 20213 = JCM 1192	DSM 20213	SAMN00008778	Homo sapiens	1134	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score

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