Search results for phylogenetically related strains

 

Rank Compare Genome ID Species Strain BioSample ID Host Allelic distance ARGs VFs PGs PPRS
1GCA_001272315.2Lactiplantibacillus plantarum subsp. plantarumCGMCC 1.557SAMN03976562-0
2GCA_022810685.1Lactiplantibacillus plantarumSCB0151SAMN22106488Kefir grain32
3GCA_009756965.1Lactiplantibacillus plantarumBK-022SAMN11655668-67
4GCA_003966855.1Lactiplantibacillus plantarum-SAMD00097254-167
5GCA_030464485.1Lactiplantibacillus plantarumFCQNA32M4SAMN12027236Homo sapiens201
6GCA_034333585.1Lactiplantibacillus plantarumcqf-43SAMN37720970sow feces213
7GCA_001540965.1Lactiplantibacillus plantarumLp1612SAMN03702585bovine216
8GCA_017576965.1Lactiplantibacillus plantarumKLDS1.0386SAMN18323758-222
9GCA_025189965.1Lactiplantibacillus plantarumCIRM-BIA 653SAMN10365483-223
10GCA_019599425.1Lactiplantibacillus plantarumJZ6SAMN20526383-226
11GCA_020844685.1Lactiplantibacillus plantarumFUA3302SAMN21227964-226
12GCA_024181685.1Lactiplantibacillus plantarumP9SAMN15795378-226
13GCA_026127685.1Lactiplantibacillus plantarumFUA3302SAMN21845655-226
14GCA_020844665.1Lactiplantibacillus plantarumFUA3428SAMN21235229-227
15GCA_026127775.1Lactiplantibacillus plantarumFUA3428SAMN21845660-227
16GCA_008868495.1Lactiplantibacillus plantarumBIO1096SAMN12856541-228
17GCA_041344945.1Lactiplantibacillus plantarumMD159SAMN43087929-236
18GCA_017580935.1Lactiplantibacillus plantarumEL11SAMN13735608-237
19GCA_031085385.1Lactiplantibacillus plantarumBRD3ASAMN33981270-241
20GCA_036321505.1Lactiplantibacillus plantarumCGMCC 14177SAMN39555870-242
21GCA_043951895.1Lactiplantibacillus plantarumLP3-9SAMN44321994-247
22GCA_043951965.1Lactiplantibacillus plantarumLP3-5SAMN44321959-247
23GCA_001715615.1Lactiplantibacillus plantarumLY-78SAMN04437173-248
24GCA_004101605.1Lactiplantibacillus plantarumSRCM103362SAMN10743347-251
25GCA_001633565.1Lactiplantibacillus plantarumNizo2801SAMN04528826-254
26GCA_031461055.1Lactiplantibacillus plantarumKCKM 0106SAMN37221010-258
27GCA_030061985.1Lactiplantibacillus plantarumSS6SAMN25008671-276
28GCA_030061935.1Lactiplantibacillus plantarumB3SAMN25008669-279
29GCA_002914965.1Lactiplantibacillus plantarumBP06SAMN07187784-312
30GCA_003053035.1Lactiplantibacillus plantarumDS18_9SAMN06464105Homo sapiens312
31GCA_003061725.1Lactiplantibacillus plantarumDS6_9SAMN05726897Homo sapiens312
32GCA_003061765.1Lactiplantibacillus plantarumDS14_9SAMN05726895Homo sapiens312
33GCA_003061785.1Lactiplantibacillus plantarumDS9_9SAMN05726899Homo sapiens312
34GCA_003061805.1Lactiplantibacillus plantarumDS11_9SAMN05726893Homo sapiens312
35GCA_003143915.1Lactiplantibacillus plantarumHAC01SAMN09087848-312
36GCA_003597595.1Lactiplantibacillus plantarumATG-K6SAMN10094369-312
37GCA_003597615.1Lactiplantibacillus plantarumATG-K8SAMN10094466-312
38GCA_006364975.1Lactiplantibacillus plantarumNTTN08SAMN11952115Homo sapiens312
39GCA_021279005.2Lactiplantibacillus plantarum022AESAMN09662691-312
40GCA_026183415.1Lactiplantibacillus plantarumBRD_L15SAMN31580342Canis lupus familiaris dachshund312
41GCA_026275505.1Lactiplantibacillus plantarumV1SAMN31726903cow312
42GCA_028323145.1Lactiplantibacillus plantarum1001274st1_G7_1001274B_151102SAMN31322645Homo sapiens312
43GCA_040785175.1Lactiplantibacillus plantarumgbc_dSAMN41082099-312
44GCA_040790905.1Lactiplantibacillus plantarumAUSA004SAMN41916868-312
45GCA_040822595.1Lactiplantibacillus plantarumATA-LPC98052SAMN41784237-312
46GCA_040883545.1Lactiplantibacillus plantarumAM-LP-81SAMN42007028-312
47GCA_042691645.1Lactiplantibacillus plantarumLP01SAMN43919990-312
48GCA_045348195.1Lactiplantibacillus plantarumTCI999SAMN40716503-312
49GCA_045528025.1Lactiplantibacillus plantarumFAM 25263SAMN43257761-312
50GCA_046109905.1Lactiplantibacillus plantarumTCI227SAMN40890045-312
51GCA_047495545.1Lactiplantibacillus plantarumOBM7SAMN46400537-312
52GCA_048657025.1Lactiplantibacillus plantarumRAL-4SAMN46169820-312
53GCA_002024845.1Lactiplantibacillus plantarumCLP0611SAMN06240352-313
54GCA_003023825.1Lactiplantibacillus plantarumJDARSHSAMN08741665-313
55GCA_003586485.1Lactiplantibacillus plantarumDR7SAMN09721150Bos taurus313
56GCA_013256965.1Lactiplantibacillus plantarum subsp. plantarumG1SAMN14979736-313
57GCA_040785225.1Lactiplantibacillus plantarumgbc_CSAMN41082098-313
58GCA_003053045.1Lactiplantibacillus plantarumDS23_9SAMN06464107Homo sapiens314
59GCA_028323205.1Lactiplantibacillus plantarum1001274st1_B5_1001274B_151102SAMN31322644Homo sapiens314
60GCA_047649195.1Lactiplantibacillus plantarumV2SAMN46400503-314
61GCA_025212155.1Lactiplantibacillus plantarumCIRM-BIA 2224SAMN10365325-316
62GCA_031597175.1Lactiplantibacillus plantarumVHProbi QSH01SAMN37344986-500
63GCA_044731905.1Lactiplantibacillus plantarumDSM 12028SAMN41278858-589
64GCA_022558425.1Lactiplantibacillus plantarumSTSAMN24424940-598
65GCA_023108905.1Lactiplantibacillus plantarumM4L1SAMN26138624-611
66GCA_034478365.1Lactiplantibacillus plantarumS034-52w-2SAMN38650131Homo sapiens626
67GCA_034422915.1Lactiplantibacillus plantarumYW2189SAMN38636266Homo sapiens627
68GCA_001639595.1Lactiplantibacillus plantarumNizo2263SAMN04525976-630
69GCA_031877725.1Lactiplantibacillus plantarumSYBC-SM3SAMN35789079-630
70GCA_001672035.1Lactiplantibacillus plantarumNCU116SAMN05162259-636
71GCA_002173655.1Lactiplantibacillus plantarumSRCM102022SAMN07125944-638
72GCA_044129425.1Lactiplantibacillus plantarumLVS14SAMN37186726-639
73GCA_020881935.1Lactiplantibacillus plantarumZW5SAMN22871635-641
74GCA_029854235.1Lactiplantibacillus plantarumMA2SAMN34153834-641
75GCA_036330065.1Lactiplantibacillus plantarum subsp. plantarumGBCC-GR003SAMN39614441Homo sapiens641
76GCA_039838505.1Lactiplantibacillus plantarum1001287st2_C3_1001287B_170213SAMN31322647Homo sapiens641
77GCA_000148815.2Lactiplantibacillus plantarum ST-IIIST-IIISAMN02603896-642
78GCA_001639565.1Lactiplantibacillus plantarumNizo2260SAMN04525974Homo sapiens642
79GCA_001651845.1Lactiplantibacillus plantarumNizo1837SAMN04510483Homo sapiens642
80GCA_003344845.1Lactiplantibacillus plantarumCGMCC12436SAMN09699166-642
81GCA_007833595.1Lactiplantibacillus plantarumY44SAMN09487401-642
82GCA_009889775.1Lactiplantibacillus plantarumLpRasSAMN05645852-642
83GCA_017301935.1Lactiplantibacillus plantarum12SAMN13495976Scophthalmus maximus642
84GCA_018588615.2Lactiplantibacillus plantarum subsp. plantarumM17SAMN17313503-642
85GCA_018588665.2Lactiplantibacillus plantarum subsp. plantarumM8SAMN17313476-642
86GCA_023207995.1Lactiplantibacillus plantarumLP-F1SAMN14572866-642
87GCA_025723165.1Lactiplantibacillus plantarumBF_15SAMN23674217-642
88GCA_027854125.1Lactiplantibacillus plantarumHH-LP56SAMN32599285-642
89GCA_031461015.1Lactiplantibacillus plantarumKCKM 0594SAMN37256206-642
90GCA_038039495.1Lactiplantibacillus plantarumplantIISAMN40560998activated sludge642
91GCA_038743365.1Lactiplantibacillus plantarumHOM2217SAMN41038019-642
92GCA_039938975.1Lactiplantibacillus plantarumLS 4-4SAMN41451970Homo sapiens642
93GCA_039954855.1Lactiplantibacillus plantarumAHQ-14SAMN41274413-642
94GCA_040084715.1Lactiplantibacillus plantarumBGI-N6SAMN41398132Homo sapiens642
95GCA_040745055.1Lactiplantibacillus plantarumCMTB-TF1SAMN42358598Tremella fuciformis642
96GCA_041679785.1Lactiplantibacillus plantarumDo4_IMSAMN41163062Homo sapiens642
97GCA_001617525.2Lactiplantibacillus plantarumCAUH2SAMN04549363-643
98GCA_044590115.1Lactiplantibacillus plantarumNMGL2SAMN44480978Food sample644
99GCA_001436855.1Lactiplantibacillus plantarumDSM 13273SAMN02797770-645
100GCA_003345375.1Lactiplantibacillus plantarumTMW 1.1478SAMN07236647-645