Search results for phylogenetically related strains

 

Rank Compare Genome ID Species Strain BioSample ID Host Allelic distance ARGs VFs PGs PPRS
1GCA_001540925.1Lactiplantibacillus plantarumLp1610SAMN03702584bovine0
2GCA_024969905.1Lactiplantibacillus plantarumSRCM210465SAMN30551690Sus scrofa domesticus72
3GCA_024800605.1Lactiplantibacillus plantarumSRCM210459SAMN30472540Sus scrofa domesticus74
4GCA_001633675.1Lactiplantibacillus plantarumNizo2889SAMN04528877-187
5GCA_009720585.1Lactiplantibacillus plantarumKCCP11226SAMN13255693-198
6GCA_014131735.1Lactiplantibacillus plantarumDSM 20174SAMN11357169pickled cabbage199
7GCA_000143745.1Lactiplantibacillus plantarum subsp. plantarum ATCC 14917 = JCM 1149 = CGMCC 1.2437ATCC 14917SAMN00001478Homo sapiens200
8GCA_001308305.1Lactiplantibacillus plantarumNizo2877SAMN04123802-200
9GCA_001434175.1Lactiplantibacillus plantarum subsp. plantarum ATCC 14917 = JCM 1149 = CGMCC 1.2437CGMCC 1.2437SAMN02369435-200
10GCA_001633645.1Lactiplantibacillus plantarumNizo2855SAMN04528876-200
11GCA_002750675.1Lactiplantibacillus plantarumRI-203SAMN05717751-200
12GCA_007989145.1Lactiplantibacillus plantarum subsp. plantarum-SAMD00166242-200
13GCA_003428355.1Lactiplantibacillus plantarumIDCC3501SAMN09858434-201
14GCA_019655875.1Lactiplantibacillus plantarum subsp. plantarum-SAMD00324205-201
15GCA_025190105.1Lactiplantibacillus plantarumCIRM-BIA 2109SAMN10365473-201
16GCA_002117305.1Lactiplantibacillus plantarumTMW 1.1623SAMN05805047-202
17GCA_025189985.1Lactiplantibacillus plantarumCIRM-BIA 466SAMN10365482-202
18GCA_029854315.1Lactiplantibacillus plantarumWLPL01SAMN34160146-203
19GCA_001331925.2Lactiplantibacillus plantarumWLPL04SAMN04092618Homo sapiens204
20GCA_030263185.2Lactiplantibacillus plantarumILSF15SAMN18440976Homo sapiens206
21GCA_023370155.1Lactiplantibacillus plantarumJB-1SAMN28097544-208
22GCA_002737935.1Lactiplantibacillus plantarumDietG20.1.2SAMN07834139-210
23GCA_029849115.1Lactiplantibacillus plantarum33CSAMN33849716-211
24GCA_029906245.1Lactiplantibacillus plantarumELAB66SAMN34167589-211
25GCA_030403475.1Lactiplantibacillus plantarumELAB 48CSAMN35983174-211
26GCA_030504705.1Lactiplantibacillus plantarum40CSAMN36405041-211
27GCA_030403425.1Lactiplantibacillus plantarumELAB 66WSAMN35984459-212
28GCA_002737995.1Lactiplantibacillus plantarumDietG20.2.2_EESAMN07834417-213
29GCA_029764995.1Lactiplantibacillus plantarumELAB25SAMN33850044-213
30GCA_048541615.1Lactiplantibacillus plantarumZG308SAMN47195325-213
31GCA_002737825.1Lactiplantibacillus plantarumFlyG9.1.4SAMN07834051Drosophila melanogaster214
32GCA_002737885.1Lactiplantibacillus plantarumFlyG20.2.6SAMN07834128Drosophila melanogaster215
33GCA_002738055.1Lactiplantibacillus plantarumFlyG3.1.8SAMN07834046Drosophila melanogaster215
34GCA_002737845.1Lactiplantibacillus plantarumFlyG20.1.4SAMN07834056Drosophila melanogaster219
35GCA_025133155.1Lactiplantibacillus plantarum1527SAMN10365122-219
36GCA_049525375.1Lactiplantibacillus plantarumHS1-L1SAMN43140290-219
37GCA_002735815.1Lactiplantibacillus plantarumFlyG2.1.8SAMN07829376-221
38GCA_003346175.1Lactiplantibacillus plantarumKMB_597SAMN09398937-221
39GCA_038024955.1Lactiplantibacillus plantarumLP140SAMN39639084-222
40GCA_001643065.1Lactiplantibacillus plantarumUC8491SAMN04485286-223
41GCA_037094665.1Lactiplantibacillus plantarumLrld-22SAMN40188378-223
42GCA_002737745.1Lactiplantibacillus plantarumFlyG8.1.1SAMN07834049Drosophila melanogaster224
43GCA_002737905.1Lactiplantibacillus plantarumFlyG11.2.6SAMN07834125Drosophila melanogaster224
44GCA_011009755.1Lactiplantibacillus plantarumP5SAMN10822528Meles meles225
45GCA_025189925.1Lactiplantibacillus plantarumCIRM-BIA 2114SAMN10365486-225
46GCA_025189945.1Lactiplantibacillus plantarumCIRM-BIA 465SAMN10365484-226
47GCA_031596315.1Lactiplantibacillus plantarumVHProbi SYSAMN37345008-226
48GCA_001633605.1Lactiplantibacillus plantarumNizo2806SAMN04528828-227
49GCA_025122595.1Lactiplantibacillus plantarum1525SAMN10365120-227
50GCA_035966695.1Lactiplantibacillus plantarumSCO1SAMN39452779cow229
51GCA_009937825.1Lactiplantibacillus plantarumSRCM101511SAMN08707604-230
52GCA_002737835.1Lactiplantibacillus plantarumFlyG10.1.5SAMN07834052Drosophila melanogaster235
53GCA_002737925.1Lactiplantibacillus plantarumFlyG9.2.5SAMN07834089Drosophila melanogaster235
54GCA_002737775.1Lactiplantibacillus plantarumFlyG8.1.2SAMN07834050Drosophila melanogaster238
55GCA_002738045.1Lactiplantibacillus plantarumFlyG10.1.9SAMN07834053Drosophila melanogaster238
56GCA_049190885.1Lactiplantibacillus plantarumLPJBC5SAMN47384276-238
57GCA_002737965.1Lactiplantibacillus plantarumFlyG11.1.6SAMN07834055Drosophila melanogaster239
58GCA_029910155.1Lactiplantibacillus plantarumGK502SAMN30034962-242
59GCA_003952885.1Lactiplantibacillus plantarum subsp. plantarumnF1-FDSAMN08158233-243
60GCA_002738065.1Lactiplantibacillus plantarumFlyG7.1.6SAMN07834047Drosophila melanogaster245
61GCA_004337615.1Lactiplantibacillus plantarumEMSAMN11053536-251
62GCA_002737975.1Lactiplantibacillus plantarumFlyG11.1.2SAMN07834054Drosophila melanogaster255
63GCA_000830535.1Lactiplantibacillus plantarum90skSAMN03272560Homo sapiens263
64GCA_030061915.1Lactiplantibacillus plantarumLPgojiSAMN25008727-265
65GCA_028322885.1Lactiplantibacillus plantarum1001287st1_A4_1001287B_170213SAMN31322646Homo sapiens270
66GCA_026013765.1Lactiplantibacillus plantarumE2SAMN31455228Larimichthys crocea271
67GCA_900452585.1Lactiplantibacillus plantarum subsp. plantarumNCTC13644SAMEA104016171environmental272
68GCA_014840995.1Lactiplantibacillus plantarumPMO08SAMN16261143-274
69GCA_013377705.1Lactiplantibacillus plantarumZN-3SAMN15338494chicken277
70GCA_046244405.1Lactiplantibacillus plantarumLP8SAMN45628971-280
71GCA_019641415.1Lactiplantibacillus plantarumLB244RSAMN20676127-281
72GCA_027558615.1Lactiplantibacillus plantarumVHProbi E15SAMN27162619Homo sapiens281
73GCA_024758745.1Lactiplantibacillus plantarumVHProbi O10SAMN28104611Homo sapiens282
74GCA_030297735.1Lactiplantibacillus plantarumAWA2045SAMD00599671-339
75GCA_001633415.1Lactiplantibacillus plantarumNizo2741SAMN04528807-343
76GCA_017742875.1Lactiplantibacillus plantarumLRCC5314SAMN18452343-346
77GCA_029542245.1Lactiplantibacillus plantarumEN6SAMN32424931alfalfa348
78GCA_002234395.1Lactiplantibacillus plantarum8 PA 3SAMN07312274Homo sapiens349
79GCA_036353265.1Lactiplantibacillus plantarumF53SAMN38726256-349
80GCA_001010175.1Lactiplantibacillus plantarum8 RA-3SAMN03452286-350
81GCA_001596095.1Lactiplantibacillus plantarumJBE245SAMN04517536-350
82GCA_004403045.2Lactiplantibacillus plantarum8p-a3SAMN11180819-350
83GCA_009762745.1Lactiplantibacillus plantarum8P-A3SAMN13520994-351
84GCA_023168025.1Lactiplantibacillus plantarum-SAMD00290014-351
85GCA_023973045.1Lactiplantibacillus plantarumZ.6-1SAMN29205640-351
86GCA_004404125.1Lactiplantibacillus plantarum8p-a3-ClrSAMN11180791-352
87GCA_044990725.1Lactiplantibacillus plantarumFNCPS 37SAMN44657154-353
88GCA_049525355.1Lactiplantibacillus plantarumHS1-L2SAMN43140291-353
89GCA_019311725.2Lactiplantibacillus plantarum8p-a3-Clr-AmxSAMN20132781-355
90GCA_030464525.1Lactiplantibacillus plantarumFCQNA27M4SAMN12027233Homo sapiens358
91GCA_004354995.1Lactiplantibacillus plantarumATCC 202195SAMN11106966Homo sapiens359
92GCA_010586945.1Lactiplantibacillus plantarum202195SAMN11618740-359
93GCA_018351295.1Lactiplantibacillus plantarumATCC 202195SAMN14169821Homo sapiens359
94GCA_023145715.1Lactiplantibacillus plantarumFCa3LSAMN23714032-359
95GCA_013155145.1Lactiplantibacillus plantarumCNEI-KCA4SAMN14941080Plant361
96GCA_025189845.1Lactiplantibacillus plantarumCIRM-BIA 2115SAMN10365490-364
97GCA_025190165.1Lactiplantibacillus plantarumCIRM-BIA 2180SAMN10365470-364
98GCA_013694305.1Lactiplantibacillus plantarumCNEI-KCA5SAMN15511455-375
99GCA_028768485.1Lactiplantibacillus plantarumSMB758SAMN33235474-377
100GCA_033546835.1Lactiplantibacillus plantarumbeLP1SAMN37988430-378