Search results for phylogenetically related strains

 

Rank Compare Genome ID Species Strain BioSample ID Host Allelic distance ARGs VFs PGs PPRS
1GCA_001831215.1Lacticaseibacillus rhamnosusASCC 3018SAMN05915697-0
2GCA_040235135.2Lacticaseibacillus rhamnosusBIM B-189SAMN41706631-12
3GCA_030876785.1Lacticaseibacillus rhamnosusL4SAMN34082183Homo sapiens15
4GCA_009720565.1Lacticaseibacillus rhamnosusBIO5326SAMN13344000Homo sapiens16
5GCA_025189315.1Lacticaseibacillus rhamnosusCIRM-BIA 607SAMN10365517-16
6GCA_025189605.1Lacticaseibacillus rhamnosusCIRM-BIA 1952SAMN10365502-16
7GCA_031594435.1Lacticaseibacillus rhamnosusVHProbi V6156SAMN37345368-16
8GCA_036583945.1Lacticaseibacillus rhamnosusCP-1SAMN39624591-16
9GCA_001656995.1Lacticaseibacillus rhamnosusLrh21SAMN03196623Homo sapiens17
10GCA_003061705.1Lacticaseibacillus rhamnosusDS14_11SAMN05864077Homo sapiens17
11GCA_004167055.1Lacticaseibacillus rhamnosusco_0103SAMN10239552Homo sapiens17
12GCA_009679265.1Lacticaseibacillus rhamnosusBIOML-A9SAMN11946126Homo sapiens17
13GCA_009679295.1Lacticaseibacillus rhamnosusBIOML-A8SAMN11946125Homo sapiens17
14GCA_009679405.1Lacticaseibacillus rhamnosusBIOML-A2SAMN11946119Homo sapiens17
15GCA_018228745.1Lacticaseibacillus rhamnosusX253SAMN18868053-17
16GCA_019967935.1Lacticaseibacillus rhamnosusCAU 1365SAMN20968817-17
17GCA_022220485.1Lacticaseibacillus rhamnosusVHProbi Y39SAMN23764977-17
18GCA_025189565.1Lacticaseibacillus rhamnosusCIRM-BIA 2134SAMN10365504-17
19GCA_025631035.1Lacticaseibacillus rhamnosusPB7SAMN31096050-17
20GCA_026967105.1Lacticaseibacillus rhamnosusLrh_yogurt_C2SAMN32062181-17
21GCA_026967125.1Lacticaseibacillus rhamnosusLrh_yogurt_C4SAMN32062183-17
22GCA_026967135.1Lacticaseibacillus rhamnosusLrh_yogurt_C6SAMN32062185-17
23GCA_028320325.1Lacticaseibacillus rhamnosus1001216st2_F12_1001283B150209_150212SAMN31322658Homo sapiens17
24GCA_028321125.1Lacticaseibacillus rhamnosus1001216st2_F11_1001283B150209_150212SAMN31322657Homo sapiens17
25GCA_001435405.1Lacticaseibacillus rhamnosus DSM 20021 = JCM 1136 = NBRC 3425DSM 20021SAMN02369512-18
26GCA_004798455.1Lacticaseibacillus rhamnosusUBLR-58SAMN11370921-18
27GCA_009679255.1Lacticaseibacillus rhamnosusBIOML-A10SAMN11946127Homo sapiens18
28GCA_009679355.1Lacticaseibacillus rhamnosusBIOML-A6SAMN11946123Homo sapiens18
29GCA_026967405.1Lacticaseibacillus rhamnosusLrh_blood001SAMN32062169Homo sapiens18
30GCA_028321165.1Lacticaseibacillus rhamnosus1001216st2_D6_1001217B_150727SAMN31322656Homo sapiens18
31GCA_028322895.1Lacticaseibacillus rhamnosus1001216st2_D3_1001216I_160404SAMN31322655Homo sapiens18
32GCA_028323345.1Lacticaseibacillus rhamnosus1001216st2_G3_1001216I_160404SAMN31322659Homo sapiens18
33GCA_900636875.1Lacticaseibacillus rhamnosusNCTC13710SAMEA3881060-18
34GCA_900636965.1Lacticaseibacillus rhamnosusNCTC13764SAMEA3905380-18
35GCA_003061645.1Lacticaseibacillus rhamnosusDS15_11SAMN05864078Homo sapiens19
36GCA_040883415.1Lacticaseibacillus rhamnosusAM-LR-51SAMN42007034-19
37GCA_048629105.1Lacticaseibacillus rhamnosusBBAH2SAMN47310684Heterotrigona itama19
38GCA_048629835.1Lacticaseibacillus rhamnosusBBAH7SAMN47317328Heterotrigona itama19
39GCA_048629435.1Lacticaseibacillus rhamnosusTB3SAMN47318346Tetragonula biroi20
40GCA_048629445.1Lacticaseibacillus rhamnosusTS4SAMN47318638Tetragonula sarawakensis20
41GCA_048629795.1Lacticaseibacillus rhamnosusHI1SAMN47318387Heterotrigona itama20
42GCA_003052945.1Lacticaseibacillus rhamnosusDS13_11SAMN05864079Homo sapiens21
43GCA_020844065.2Lacticaseibacillus rhamnosusIMI 507023SAMN22314508-21
44GCA_000418495.1Lacticaseibacillus rhamnosus LOCK908LOCK908SAMN02603329-22
45GCA_001590655.1Lacticaseibacillus rhamnosusASCC 290SAMN04530063-23
46GCA_002027355.1Lacticaseibacillus rhamnosusR709SAMN06480070-23
47GCA_002849515.1Lacticaseibacillus rhamnosusNRRL B-442SAMN08239957-23
48GCA_025189285.1Lacticaseibacillus rhamnosusCIRM-BIA 909SAMN10365519-23
49GCA_025189425.1Lacticaseibacillus rhamnosusCIRM-BIA 2116SAMN10365512-23
50GCA_030929905.1Lacticaseibacillus rhamnosusCRL 2244SAMN37116175-23
51GCA_029010255.1Lacticaseibacillus rhamnosusVSI33SAMN33275463Homo sapiens25
52GCA_035928125.1Lacticaseibacillus rhamnosusVHProbi V77SAMN39436992-25
53GCA_001657205.1Lacticaseibacillus rhamnosusLrh42SAMN03196661-26
54GCA_001656715.1Lacticaseibacillus rhamnosusLrh15SAMN03196633Homo sapiens28
55GCA_001831275.1Lacticaseibacillus rhamnosusASCC 1521SAMN05915696-38
56GCA_007990855.1Lacticaseibacillus rhamnosus DSM 20021 = JCM 1136 = NBRC 3425-SAMD00169722-57
57GCA_025189345.1Lacticaseibacillus rhamnosusCIRM-BIA 2120SAMN10365518-73
58GCA_039838405.1Lacticaseibacillus rhamnosus1001216st2_B5_1001217B_191108SAMN31322653Homo sapiens79
59GCA_001657155.1Lacticaseibacillus rhamnosusLrh12SAMN03196628Homo sapiens81
60GCA_030286545.1Lacticaseibacillus rhamnosusISO20SAMN35721675Saanen goat83
61GCA_041228125.1Lacticaseibacillus rhamnosusNS2301G1SAMN43023992-85
62GCA_009679335.1Lacticaseibacillus rhamnosusBIOML-A4SAMN11946121Homo sapiens89
63GCA_009679395.1Lacticaseibacillus rhamnosusBIOML-A3SAMN11946120Homo sapiens89
64GCA_031626835.1Lacticaseibacillus rhamnosusFUA3185SAMN29421123-90
65GCA_032465975.1Lacticaseibacillus rhamnosusLMG 23550SAMN37405142-102
66GCA_001656605.1Lacticaseibacillus rhamnosusLrh26SAMN03196629Homo sapiens103
67GCA_040705095.1Lacticaseibacillus rhamnosusPM4SAMN42384222Homo sapiens103
68GCA_901971785.1Lacticaseibacillus rhamnosusINIA P344SAMEA5671947Homo sapiens105
69GCA_001656975.1Lacticaseibacillus rhamnosusLrh25SAMN03196619-107
70GCA_009742715.1Lacticaseibacillus rhamnosusLR_AVKSAMN13198146-107
71GCA_000160175.1Lacticaseibacillus rhamnosus LMS2-1LMS2-1SAMN00001479Homo sapiens109
72GCA_000026525.1Lacticaseibacillus rhamnosus Lc 705Lc 705SAMEA2272728-110
73GCA_000233755.1Lacticaseibacillus rhamnosus ATCC 8530ATCC 8530SAMN02604241-113
74GCA_003129615.1Lacticaseibacillus rhamnosusTMC3115SAMN09099013-113
75GCA_003129645.1Lacticaseibacillus rhamnosusLR863SAMN09099009-113
76GCA_003061565.1Lacticaseibacillus rhamnosusDS17_11SAMN06464110Homo sapiens114
77GCA_003061605.1Lacticaseibacillus rhamnosusDS22_11SAMN06464112Homo sapiens114
78GCA_024665595.1Lacticaseibacillus rhamnosusGR-1SAMN29862203Homo sapiens114
79GCA_028322035.1Lacticaseibacillus rhamnosus1001216st2_D1_1001216B_150713SAMN31322654Homo sapiens114
80GCA_901971795.1Lacticaseibacillus rhamnosusINIA P540SAMEA5673845Homo sapiens114
81GCA_044990685.1Lacticaseibacillus rhamnosusFNCPS 477SAMN44657155-115
82GCA_024053515.2Lacticaseibacillus rhamnosusDM065SAMN29255128Homo sapiens116
83GCA_030490305.1Lacticaseibacillus rhamnosusDM163SAMN36399042Homo sapiens116
84GCA_013425645.1Lacticaseibacillus rhamnosusAMC0716SAMN15514052Homo sapiens117
85GCA_024442295.1Lacticaseibacillus rhamnosusCLK 101SAMN29784175-117
86GCA_032465955.1Lacticaseibacillus rhamnosusLMG 19716SAMN37405143-117
87GCA_041167785.1Lacticaseibacillus rhamnosusYGRT01SAMN43028782-117
88GCA_013425605.1Lacticaseibacillus rhamnosusAMC0720SAMN15514053Homo sapiens118
89GCA_020826335.1Lacticaseibacillus rhamnosusPMC203SAMN22826457Homo sapiens118
90GCA_013425665.1Lacticaseibacillus rhamnosusAMC0722SAMN15514050Homo sapiens119
91GCA_013425655.1Lacticaseibacillus rhamnosusAMC0714SAMN15514051Homo sapiens120
92GCA_032465915.1Lacticaseibacillus rhamnosusLMG 23277SAMN37405145-120
93GCA_002762445.1Lacticaseibacillus rhamnosusGR-1SAMN07981099-121
94GCA_029011275.1Lacticaseibacillus rhamnosusVSI43SAMN33275455Homo sapiens121
95GCA_000699985.1Lacticaseibacillus rhamnosus 51B51BSAMN02776192Homo sapiens122
96GCA_013425555.1Lacticaseibacillus rhamnosusAMC0713SAMN15514055Homo sapiens122
97GCA_013425565.1Lacticaseibacillus rhamnosusAMC0707SAMN15514056Homo sapiens122
98GCA_013425735.1Lacticaseibacillus rhamnosusAMC0721SAMN15514049Homo sapiens122
99GCA_013425545.1Lacticaseibacillus rhamnosusAMC0709SAMN15514057Homo sapiens123
100GCA_019990845.1Lacticaseibacillus rhamnosuscek-R1SAMN21367937beet124