Search results for phylogenetically related strains

 

Rank Compare Genome ID Species Strain BioSample ID Host Allelic distance ARGs VFs PGs PPRS
1GCA_002218775.1Lactobacillus crispatusUMNLC7SAMN04498979Meleagris gallopavo0
2GCA_002218895.1Lactobacillus crispatusUMNLC15SAMN04498987Meleagris gallopavo154
3GCA_002218885.1Lactobacillus crispatusUMNLC14SAMN04498986Meleagris gallopavo206
4GCA_002218925.1Lactobacillus crispatusUMNLC16SAMN04498988Meleagris gallopavo250
5GCA_002218695.1Lactobacillus crispatusUMNLC6SAMN04498978Meleagris gallopavo254
6GCA_002218805.1Lactobacillus crispatusUMNLC10SAMN04498982Meleagris gallopavo256
7GCA_002218765.1Lactobacillus crispatusUMNLC5SAMN04498977Meleagris gallopavo283
8GCA_002218815.1Lactobacillus crispatusUMNLC11SAMN04498983Meleagris gallopavo295
9GCA_002218685.1Lactobacillus crispatusUMNLC8SAMN04498980Meleagris gallopavo296
10GCA_002218845.1Lactobacillus crispatusUMNLC13SAMN04498985Meleagris gallopavo296
11GCA_002218855.1Lactobacillus crispatusUMNLC12SAMN04498984Meleagris gallopavo296
12GCA_002218615.1Lactobacillus crispatusUMNLC1SAMN04498973Meleagris gallopavo313
13GCA_002218735.1Lactobacillus crispatusUMNLC9SAMN04498981Meleagris gallopavo649
14GCA_002218565.1Lactobacillus crispatusUMNLC2SAMN04498974Meleagris gallopavo651
15GCA_002218645.1Lactobacillus crispatusUMNLC3SAMN04498975Meleagris gallopavo651
16GCA_002218655.1Lactobacillus crispatusUMNLC4SAMN04498976Meleagris gallopavo651
17GCA_002218945.1Lactobacillus crispatusUMNLC18SAMN04498990Meleagris gallopavo692
18GCA_002218965.1Lactobacillus crispatusUMNLC19SAMN04498991Meleagris gallopavo692
19GCA_002218975.1Lactobacillus crispatusUMNLC20SAMN04498992Meleagris gallopavo700
20GCA_002219005.1Lactobacillus crispatusUMNLC21SAMN04498993Meleagris gallopavo700
21GCA_002219015.1Lactobacillus crispatusUMNLC24SAMN04498996Meleagris gallopavo701
22GCA_002219045.1Lactobacillus crispatusUMNLC22SAMN04498994Meleagris gallopavo701
23GCA_002219055.1Lactobacillus crispatusUMNLC25SAMN04498997Meleagris gallopavo701
24GCA_002219085.1Lactobacillus crispatusUMNLC23SAMN04498995Meleagris gallopavo701
25GCA_008694205.1Lactobacillus crispatusNCK971SAMN12667796chicken708
26GCA_008694925.1Lactobacillus crispatusNCK969SAMN12667795chicken710
27GCA_008694785.1Lactobacillus crispatusNCK988SAMN12667802chicken711
28GCA_001704465.1Lactobacillus crispatusC25SAMN05513271Gallus gallus712
29GCA_009933525.1Lactobacillus crispatusC25SAMN13634618Gallus gallus712
30GCA_008694845.1Lactobacillus crispatusNCK974SAMN12667799chicken713
31GCA_008694935.1Lactobacillus crispatusNCK967SAMN12667794chicken713
32GCA_008694765.1Lactobacillus crispatusNCK978SAMN12667801chicken715
33GCA_008694865.1Lactobacillus crispatusNCK973SAMN12667798chicken715
34GCA_008694885.1Lactobacillus crispatusNCK972SAMN12667797chicken715
35GCA_008694775.1Lactobacillus crispatusNCK2487SAMN12667804turkey719
36GCA_008694875.1Lactobacillus crispatusNCK977SAMN12667800chicken719
37GCA_016162055.1Lactobacillus crispatusLB64SAMN15357369Gallus gallus719
38GCA_025194115.1Lactobacillus crispatusCIRM-BIA 523SAMN10365338-721
39GCA_965135635.1Lactobacillus crispatusCIP103602SAMEA117660302-721
40GCA_038001365.1Lactobacillus crispatusLMG 11415SAMN33861695Homo sapiens724
41GCA_009769205.1Lactobacillus crispatusDC21.1SAMN11372136Gallus gallus731
42GCA_047782765.1Lactobacillus crispatusT31eSAMN46547635turkey734
43GCA_016162005.1Lactobacillus crispatusLB67SAMN15357372Gallus gallus735
44GCA_014982905.1Lactobacillus crispatusDSM 108970SAMN16401879Gallus gallus741
45GCA_009857395.1Lactobacillus crispatusIndica2SAMN13743077Homo sapiens742
46GCA_012843585.1Lactobacillus crispatusWCA-383-APC-5ESAMN14558270Sus scrofa domesticus742
47GCA_016901535.1Lactobacillus crispatusAn726SAMN14913593Gallus gallus742
48GCA_001434005.1Lactobacillus crispatus DSM 20584 = JCM 1185 = ATCC 33820DSM 20584SAMN02369387-743
49GCA_008694755.1Lactobacillus crispatusNCK2488SAMN12667805Homo sapiens743
50GCA_018987235.1Lactobacillus crispatusATCC 33820SAMN18472633Homo sapiens743
51GCA_019537355.1Lactobacillus crispatusUBLCp-01SAMN20447867Homo sapiens743
52GCA_002088015.1Lactobacillus crispatusATCC 33820SAMN06624125-744
53GCA_030212645.1Lactobacillus crispatusUMB9873SAMN34996756Homo sapiens746
54GCA_030213555.1Lactobacillus crispatusUMB9226SAMN34996707Homo sapiens746
55GCA_016161975.1Lactobacillus crispatusLB69SAMN15357374Gallus gallus748
56GCA_002861805.1Lactobacillus crispatusUMB0824SAMN08193690Homo sapiens752
57GCA_013456995.1Lactobacillus crispatusB4SAMN15516019Homo sapiens752
58GCA_030373605.1Lactobacillus crispatus140_Shaedl_plusKSAMN34359386Gallus gallus753
59GCA_007713895.1Lactobacillus crispatusNCK1350SAMN10922320Homo sapiens756
60GCA_033803605.1Lactobacillus crispatusUMB5393SAMN38148654Homo sapiens757
61GCA_033803625.1Lactobacillus crispatusUMB5409SAMN38148653Homo sapiens757
62GCA_033803925.1Lactobacillus crispatusUMB6018SAMN38148638Homo sapiens757
63GCA_033803945.1Lactobacillus crispatusUMB6035SAMN38148636Homo sapiens757
64GCA_033803985.1Lactobacillus crispatusUMB6021SAMN38148637Homo sapiens757
65GCA_038001385.1Lactobacillus crispatusLMG 18189SAMN33861692Homo sapiens757
66GCA_032376685.1Lactobacillus crispatusUMB4356SAMN37434649Homo sapiens759
67GCA_002811165.1Lactobacillus crispatusDISK12SAMN05770992Homo sapiens760
68GCA_000091765.1Lactobacillus crispatus ST1ST1SAMEA2272191-761
69GCA_019278055.1Lactobacillus crispatus8.2SAMN18809434Homo sapiens762
70GCA_019278105.1Lactobacillus crispatus5.1SAMN18809432Homo sapiens762
71GCA_019278135.1Lactobacillus crispatus7.2SAMN18809433Homo sapiens762
72GCA_013778545.1Lactobacillus crispatusDSM 29598SAMN14448840-768
73GCA_008694745.1Lactobacillus crispatusNCK1351SAMN12667803Homo sapiens769
74GCA_000497065.1Lactobacillus crispatus EM-LC1EM-LC1SAMN02471465Homo sapiens770
75GCA_008694965.1Lactobacillus crispatusNCK777SAMN12667792-770
76GCA_016161925.1Lactobacillus crispatusLB70SAMN15357375Gallus gallus771
77GCA_016162105.1Lactobacillus crispatusLB65SAMN15357370Gallus gallus771
78GCA_008694975.1Lactobacillus crispatusNCK953SAMN12667793chicken775
79GCA_008694985.1Lactobacillus crispatusNCK96SAMN12667791Homo sapiens775
80GCA_030214445.1Lactobacillus crispatusUMB8789SAMN34996665Homo sapiens775
81GCA_014654865.1Lactobacillus crispatusBC5SAMN13648610Homo sapiens776
82GCA_016161995.1Lactobacillus crispatusLB68SAMN15357373Gallus gallus782
83GCA_025194085.1Lactobacillus crispatusCIRM-BIA 2111SAMN10365340-782
84GCA_038001405.1Lactobacillus crispatusLMG 12003SAMN33861689Homo sapiens782
85GCA_032376885.1Lactobacillus crispatusUMB6244SAMN37434651Homo sapiens783
86GCA_032376945.1Lactobacillus crispatusUMB5661SAMN37434658Homo sapiens783
87GCA_002863245.1Lactobacillus crispatusUMB0040SAMN08193691Homo sapiens784
88GCA_030230975.1Lactobacillus crispatusUMB1096ASAMN35153857Homo sapiens785
89GCA_038001425.1Lactobacillus crispatusLMG 12005SAMN33861690Homo sapiens785
90GCA_040109495.1Lactobacillus crispatusBC1SAMN41005275-788
91GCA_016162045.1Lactobacillus crispatusLB66SAMN15357371Gallus gallus792
92GCA_002861815.1Lactobacillus crispatusUMB0085SAMN08193689Homo sapiens793
93GCA_025194105.1Lactobacillus crispatusCIRM-BIA 2112SAMN10365339-794
94GCA_008868575.1Lactobacillus crispatusBIO6272SAMN12856537Homo sapiens795
95GCA_038001465.1Lactobacillus crispatusLMG11440SAMN33861691Homo sapiens796
96GCA_038001325.1Lactobacillus crispatusLMG 18200SAMN33861694Homo sapiens799
97GCA_038001345.1Lactobacillus crispatusLMG 18199SAMN33861693Homo sapiens804
98GCA_001541385.1Lactobacillus crispatusVMC3SAMN03893601Homo sapiens806
99GCA_013487905.1Lactobacillus crispatus1DSAMN13624824Equus caballus811
100GCA_027158945.1Lactobacillus crispatusC0022A5SAMN25045735Homo sapiens818