Search results for phylogenetically related strains

 

Rank Compare Genome ID Species Strain BioSample ID Host Allelic distance ARGs VFs PGs PPRS
1GCA_002901165.3Lacticaseibacillus paracasei subsp. paracaseiNTU 101SAMN07445234Homo sapiens0
2GCA_003712645.1Lacticaseibacillus paracaseiFAM22276SAMN04088881-189
3GCA_003712935.1Lacticaseibacillus paracaseiFAM3248SAMN04088887-189
4GCA_003712225.1Lacticaseibacillus paracaseiFAM10859SAMN04088858-217
5GCA_029906315.1Lacticaseibacillus paracasei subsp. paracaseiMI29SAMN34105739Homo sapiens226
6GCA_002813615.1Lacticaseibacillus paracasei subsp. paracaseiTMW 1.1434SAMN05356834-229
7GCA_025190495.1Lacticaseibacillus paracaseiCIRM-BIA 288SAMN10365452-236
8GCA_009739485.1Lacticaseibacillus paracasei subsp. paracaseiIBB3423SAMN07167770-248
9GCA_024717335.1Lacticaseibacillus paracaseiVHProbi M56SAMN27162336Homo sapiens249
10GCA_003712795.1Lacticaseibacillus paracaseiFAM4067SAMN04088889-251
11GCA_037966745.1Lacticaseibacillus paracaseiATA-LTC-Lp040802SAMN40643417Homo sapiens251
12GCA_038025045.1Lacticaseibacillus paracaseiATA-LTC-Lp121000SAMN40643419animal251
13GCA_040430295.1Lacticaseibacillus paracaseiATA-LTC-Lp041103SAMN41784243Animal258
14GCA_000958485.1Lacticaseibacillus paracasei NRIC 1981-SAMD00000558-275
15GCA_000474615.1Lacticaseibacillus paracasei5bSAMN02470054-276
16GCA_002914885.1Lacticaseibacillus paracaseiBP07SAMN07187783-283
17GCA_000309765.1Lacticaseibacillus paracaseiLc-10SAMN02472012-284
18GCA_003712295.1Lacticaseibacillus paracaseiFAM18099SAMN04088859-460
19GCA_002406665.1Lacticaseibacillus paracaseiB3SAMN07665582-496
20GCA_035330705.1Lacticaseibacillus paracaseiS135-24WSAMN38650142Homo sapiens498
21GCA_030540905.1Lacticaseibacillus paracasei11wSAMN36403201-533
22GCA_003712245.1Lacticaseibacillus paracaseiFAM18108SAMN04088862-543
23GCA_003712835.1Lacticaseibacillus paracaseiFAM8407SAMN04088897-565
24GCA_034044075.1Lacticaseibacillus paracaseiMP11ASAMN37950489-570
25GCA_003712665.1Lacticaseibacillus paracaseiFAM22277SAMN04088882-576
26GCA_003367655.1Lacticaseibacillus paracasei subsp. paracaseiKMB_598SAMN09398938-591
27GCA_018917305.1Lacticaseibacillus paracaseiN53SAMN19374054Macaca fascicularis592
28GCA_039615415.1Lacticaseibacillus paracaseiTBM 27SAMN41068605-593
29GCA_000410075.1Lacticaseibacillus paracasei subsp. paracasei CNCM I-4648CNCM I-4648SAMN03177793-601
30GCA_031630235.1Lacticaseibacillus paracasei69BisSAMN30173654goat602
31GCA_028993835.1Lacticaseibacillus paracaseiARN1SAMN33449985bacteria611
32GCA_036762785.1Lacticaseibacillus paracasei1571-2_IL3211SAMN37904772animal616
33GCA_036762765.1Lacticaseibacillus paracasei1567_IL3212SAMN37904769animal617
34GCA_018257175.1Lacticaseibacillus paracaseiDm-2019-60SAMN17146146Drosophila melanogaster622
35GCA_028878315.1Lacticaseibacillus paracaseiDSM 4905SAMN23708196Homo sapiens624
36GCA_000410175.1Lacticaseibacillus paracasei subsp. paracasei Lpp225Lpp225SAMN02469715-625
37GCA_044740695.1Lacticaseibacillus paracaseiE11.5SAMN44487087-625
38GCA_018729425.1Lacticaseibacillus paracaseiMYD3SAMN16551136-626
39GCA_021650835.1Lacticaseibacillus paracasei subsp. paracaseiGR0562SAMN25145123Homo sapiens626
40GCA_025137495.1Lacticaseibacillus paracaseiL1SAMN20355457-626
41GCA_047785155.1Lacticaseibacillus paracaseiSRCM212209SAMN46082883-626
42GCA_033815995.1Lacticaseibacillus paracaseiYE01SAMN37887709-627
43GCA_040822445.1Lacticaseibacillus paracasei subsp. paracaseiBS2-PB5SAMN42029631Homo sapiens628
44GCA_039615445.1Lacticaseibacillus paracaseiNKM 5.4SAMN41068727-629
45GCA_012241605.1Lacticaseibacillus paracaseiDTA81SAMN14517101Homo sapiens631
46GCA_025190685.1Lacticaseibacillus paracaseiCIRM-BIA 1445SAMN10365442-631
47GCA_003712825.1Lacticaseibacillus paracaseiFAM8374SAMN04088896-633
48GCA_015476155.1Lacticaseibacillus paracasei subsp. toleransMGB0625SAMN16668564-633
49GCA_025190485.1Lacticaseibacillus paracaseiCIRM-BIA 1869SAMN10365453-633
50GCA_019990865.1Lacticaseibacillus paracaseicek-R2SAMN21367938beet634
51GCA_025190665.1Lacticaseibacillus paracaseiCIRM-BIA 655SAMN10365443-635
52GCA_003712785.1Lacticaseibacillus paracaseiFAM6161SAMN04088891-636
53GCA_025215665.1Lacticaseibacillus paracaseiALAC-4SAMN10688387-636
54GCA_028206475.1Lacticaseibacillus paracaseiSRCM217440SAMN32670666-636
55GCA_015319235.1Lacticaseibacillus paracasei subsp. toleransMGB0543SAMN16657553-637
56GCA_015476075.1Lacticaseibacillus paracasei subsp. toleransMGB0245SAMN16657550-637
57GCA_025252385.1Lacticaseibacillus paracaseiVHProbi O44SAMN30550144Homo sapiens637
58GCA_028609725.1Lacticaseibacillus paracaseiCLP-C10SAMN14677579-637
59GCA_030361365.1Lacticaseibacillus paracaseiTOM.9SAMN35776875-637
60GCA_031348425.1Lacticaseibacillus paracaseiKCKM 0245SAMN37235621-637
61GCA_046939035.1Lacticaseibacillus paracasei subsp. paracaseiM587ASAMN35847929wild boar637
62GCA_031461095.1Lacticaseibacillus paracaseiKCKM 0992SAMN37256209-638
63GCA_000410135.1Lacticaseibacillus paracasei subsp. paracasei Lpp17Lpp17SAMN02469707-639
64GCA_001895185.1Lacticaseibacillus paracasei-SAMD00029052-639
65GCA_003712755.1Lacticaseibacillus paracaseiFAM3257SAMN04088888-639
66GCA_005864195.1Lacticaseibacillus paracaseiFAM 3257SAMN11653942-639
67GCA_003713005.1Lacticaseibacillus paracaseiFAM7821SAMN04088894-640
68GCA_044990665.1Lacticaseibacillus paracaseiFNCPS K7SAMN44657157-640
69GCA_000309665.1Lacticaseibacillus paracaseiM36SAMN02472000-641
70GCA_025544855.1Lacticaseibacillus paracaseiM38SAMN29905902Homo sapiens641
71GCA_000309785.1Lacticaseibacillus paracaseiLpc-37SAMN02472013-642
72GCA_002148805.1Lacticaseibacillus paracaseiDPC4206SAMN06220137-642
73GCA_002148885.1Lacticaseibacillus paracaseiDPC4536SAMN06463780-642
74GCA_003434205.1Lacticaseibacillus paracaseiAM33-2ACSAMN09736452Homo sapiens642
75GCA_016757675.1Lacticaseibacillus paracasei subsp. toleransS-NA5SAMN17359331-642
76GCA_016757695.1Lacticaseibacillus paracasei subsp. toleransS-NBSAMN17359333-642
77GCA_023656965.1Lacticaseibacillus paracaseiATCC 27092SAMN11309554Homo sapiens642
78GCA_024498315.1Lacticaseibacillus paracaseiSMN-LBKSAMN29933592-642
79GCA_024622515.1Lacticaseibacillus paracaseiDSM 28675SAMN29593134Mus musculus642
80GCA_028320385.1Lacticaseibacillus paracasei1001270st1_F8_1001270H_150608SAMN31322638Homo sapiens642
81GCA_030061895.1Lacticaseibacillus paracaseiGM-080SAMN27485237Homo sapiens642
82GCA_034555155.1Lacticaseibacillus paracaseiRT4SAMN38857191Brachionus plicatilis642
83GCA_035586595.1Lacticaseibacillus paracaseiHP-B1337SAMN38922877-642
84GCA_036281375.1Lacticaseibacillus paracaseiCUL07ASAMN09708453-642
85GCA_040785095.1Lacticaseibacillus paracaseigbc_fSAMN41082101-642
86GCA_041283745.2Lacticaseibacillus paracaseiORD 0998SAMN43000418Homo sapiens642
87GCA_045808845.1Lacticaseibacillus paracaseiMSR2SAMN45146297-642
88GCA_048282615.1Lacticaseibacillus paracasei439SAMN46889214-642
89GCA_049191845.1Lacticaseibacillus paracaseiIATA110SAMN45053973Homo sapiens642
90GCA_049205075.1Lacticaseibacillus paracaseiIATA109SAMN45053972Homo sapiens642
91GCA_965138865.1Lacticaseibacillus paracaseiCIP109805SAMEA117660480-642
92GCA_000026485.1Lacticaseibacillus paracaseiBL23SAMEA2272724-643
93GCA_000409895.1Lacticaseibacillus paracasei subsp. paracasei Lpp226Lpp226SAMN02469716-643
94GCA_000409995.1Lacticaseibacillus paracasei subsp. paracasei Lpp228Lpp228SAMN02469720Homo sapiens643
95GCA_000410295.1Lacticaseibacillus paracasei subsp. paracasei Lpp189Lpp189SAMN02469702-643
96GCA_002849575.1Lacticaseibacillus paracaseiDUP 13076SAMN08239980-643
97GCA_012932835.1Lacticaseibacillus paracaseiCRF28SAMN05660651-643
98GCA_023674545.1Lacticaseibacillus paracasei401SAMN28818858-643
99GCA_000194785.1Lacticaseibacillus paracaseiLC2WSAMN02603877-644
100GCA_000410235.1Lacticaseibacillus paracasei subsp. paracasei Lpp74Lpp74SAMN02469728-644