Search results for phylogenetically related strains

 

Rank Compare Genome ID Species Strain BioSample ID Host Allelic distance ARGs VFs PGs PPRS
1GCA_007713895.1Lactobacillus crispatusNCK1350SAMN10922320Homo sapiens0
2GCA_033803625.1Lactobacillus crispatusUMB5409SAMN38148653Homo sapiens130
3GCA_032376685.1Lactobacillus crispatusUMB4356SAMN37434649Homo sapiens131
4GCA_033803605.1Lactobacillus crispatusUMB5393SAMN38148654Homo sapiens131
5GCA_033803945.1Lactobacillus crispatusUMB6035SAMN38148636Homo sapiens134
6GCA_033803985.1Lactobacillus crispatusUMB6021SAMN38148637Homo sapiens134
7GCA_033803925.1Lactobacillus crispatusUMB6018SAMN38148638Homo sapiens135
8GCA_008694745.1Lactobacillus crispatusNCK1351SAMN12667803Homo sapiens174
9GCA_008694775.1Lactobacillus crispatusNCK2487SAMN12667804turkey728
10GCA_030212645.1Lactobacillus crispatusUMB9873SAMN34996756Homo sapiens728
11GCA_030213555.1Lactobacillus crispatusUMB9226SAMN34996707Homo sapiens729
12GCA_002861805.1Lactobacillus crispatusUMB0824SAMN08193690Homo sapiens733
13GCA_025194115.1Lactobacillus crispatusCIRM-BIA 523SAMN10365338-733
14GCA_965135635.1Lactobacillus crispatusCIP103602SAMEA117660302-733
15GCA_002218765.1Lactobacillus crispatusUMNLC5SAMN04498977Meleagris gallopavo737
16GCA_009857395.1Lactobacillus crispatusIndica2SAMN13743077Homo sapiens737
17GCA_016162055.1Lactobacillus crispatusLB64SAMN15357369Gallus gallus739
18GCA_002218655.1Lactobacillus crispatusUMNLC4SAMN04498976Meleagris gallopavo740
19GCA_002218565.1Lactobacillus crispatusUMNLC2SAMN04498974Meleagris gallopavo741
20GCA_002218645.1Lactobacillus crispatusUMNLC3SAMN04498975Meleagris gallopavo741
21GCA_002218695.1Lactobacillus crispatusUMNLC6SAMN04498978Meleagris gallopavo744
22GCA_009769205.1Lactobacillus crispatusDC21.1SAMN11372136Gallus gallus746
23GCA_001704465.1Lactobacillus crispatusC25SAMN05513271Gallus gallus748
24GCA_009933525.1Lactobacillus crispatusC25SAMN13634618Gallus gallus748
25GCA_001434005.1Lactobacillus crispatus DSM 20584 = JCM 1185 = ATCC 33820DSM 20584SAMN02369387-749
26GCA_002218685.1Lactobacillus crispatusUMNLC8SAMN04498980Meleagris gallopavo749
27GCA_002218735.1Lactobacillus crispatusUMNLC9SAMN04498981Meleagris gallopavo749
28GCA_002218815.1Lactobacillus crispatusUMNLC11SAMN04498983Meleagris gallopavo749
29GCA_002218845.1Lactobacillus crispatusUMNLC13SAMN04498985Meleagris gallopavo749
30GCA_002218925.1Lactobacillus crispatusUMNLC16SAMN04498988Meleagris gallopavo749
31GCA_002811165.1Lactobacillus crispatusDISK12SAMN05770992Homo sapiens749
32GCA_008694755.1Lactobacillus crispatusNCK2488SAMN12667805Homo sapiens749
33GCA_018987235.1Lactobacillus crispatusATCC 33820SAMN18472633Homo sapiens749
34GCA_019537355.1Lactobacillus crispatusUBLCp-01SAMN20447867Homo sapiens749
35GCA_038001365.1Lactobacillus crispatusLMG 11415SAMN33861695Homo sapiens749
36GCA_002088015.1Lactobacillus crispatusATCC 33820SAMN06624125-750
37GCA_008694845.1Lactobacillus crispatusNCK974SAMN12667799chicken750
38GCA_008694935.1Lactobacillus crispatusNCK967SAMN12667794chicken750
39GCA_002218805.1Lactobacillus crispatusUMNLC10SAMN04498982Meleagris gallopavo751
40GCA_002218885.1Lactobacillus crispatusUMNLC14SAMN04498986Meleagris gallopavo751
41GCA_002218975.1Lactobacillus crispatusUMNLC20SAMN04498992Meleagris gallopavo753
42GCA_016162005.1Lactobacillus crispatusLB67SAMN15357372Gallus gallus753
43GCA_016162105.1Lactobacillus crispatusLB65SAMN15357370Gallus gallus753
44GCA_002218855.1Lactobacillus crispatusUMNLC12SAMN04498984Meleagris gallopavo754
45GCA_002219005.1Lactobacillus crispatusUMNLC21SAMN04498993Meleagris gallopavo754
46GCA_002219015.1Lactobacillus crispatusUMNLC24SAMN04498996Meleagris gallopavo754
47GCA_002219045.1Lactobacillus crispatusUMNLC22SAMN04498994Meleagris gallopavo754
48GCA_002219055.1Lactobacillus crispatusUMNLC25SAMN04498997Meleagris gallopavo754
49GCA_002219085.1Lactobacillus crispatusUMNLC23SAMN04498995Meleagris gallopavo754
50GCA_008694765.1Lactobacillus crispatusNCK978SAMN12667801chicken754
51GCA_008694865.1Lactobacillus crispatusNCK973SAMN12667798chicken754
52GCA_008694885.1Lactobacillus crispatusNCK972SAMN12667797chicken755
53GCA_002218775.1Lactobacillus crispatusUMNLC7SAMN04498979Meleagris gallopavo756
54GCA_019278055.1Lactobacillus crispatus8.2SAMN18809434Homo sapiens756
55GCA_019278105.1Lactobacillus crispatus5.1SAMN18809432Homo sapiens756
56GCA_019278135.1Lactobacillus crispatus7.2SAMN18809433Homo sapiens756
57GCA_016161975.1Lactobacillus crispatusLB69SAMN15357374Gallus gallus757
58GCA_002218895.1Lactobacillus crispatusUMNLC15SAMN04498987Meleagris gallopavo758
59GCA_008694205.1Lactobacillus crispatusNCK971SAMN12667796chicken758
60GCA_008694975.1Lactobacillus crispatusNCK953SAMN12667793chicken759
61GCA_008694985.1Lactobacillus crispatusNCK96SAMN12667791Homo sapiens759
62GCA_013778545.1Lactobacillus crispatusDSM 29598SAMN14448840-759
63GCA_008694875.1Lactobacillus crispatusNCK977SAMN12667800chicken760
64GCA_002218945.1Lactobacillus crispatusUMNLC18SAMN04498990Meleagris gallopavo761
65GCA_002218965.1Lactobacillus crispatusUMNLC19SAMN04498991Meleagris gallopavo761
66GCA_008694925.1Lactobacillus crispatusNCK969SAMN12667795chicken761
67GCA_047782765.1Lactobacillus crispatusT31eSAMN46547635turkey761
68GCA_008694785.1Lactobacillus crispatusNCK988SAMN12667802chicken763
69GCA_000091765.1Lactobacillus crispatus ST1ST1SAMEA2272191-766
70GCA_002863245.1Lactobacillus crispatusUMB0040SAMN08193691Homo sapiens767
71GCA_038001385.1Lactobacillus crispatusLMG 18189SAMN33861692Homo sapiens767
72GCA_002218615.1Lactobacillus crispatusUMNLC1SAMN04498973Meleagris gallopavo768
73GCA_030230975.1Lactobacillus crispatusUMB1096ASAMN35153857Homo sapiens768
74GCA_014654865.1Lactobacillus crispatusBC5SAMN13648610Homo sapiens769
75GCA_016161925.1Lactobacillus crispatusLB70SAMN15357375Gallus gallus769
76GCA_000497065.1Lactobacillus crispatus EM-LC1EM-LC1SAMN02471465Homo sapiens770
77GCA_013456995.1Lactobacillus crispatusB4SAMN15516019Homo sapiens770
78GCA_030214445.1Lactobacillus crispatusUMB8789SAMN34996665Homo sapiens770
79GCA_002861815.1Lactobacillus crispatusUMB0085SAMN08193689Homo sapiens772
80GCA_032376885.1Lactobacillus crispatusUMB6244SAMN37434651Homo sapiens772
81GCA_032376945.1Lactobacillus crispatusUMB5661SAMN37434658Homo sapiens772
82GCA_014982905.1Lactobacillus crispatusDSM 108970SAMN16401879Gallus gallus773
83GCA_012843585.1Lactobacillus crispatusWCA-383-APC-5ESAMN14558270Sus scrofa domesticus774
84GCA_016901535.1Lactobacillus crispatusAn726SAMN14913593Gallus gallus774
85GCA_030373605.1Lactobacillus crispatus140_Shaedl_plusKSAMN34359386Gallus gallus774
86GCA_016162045.1Lactobacillus crispatusLB66SAMN15357371Gallus gallus780
87GCA_040109495.1Lactobacillus crispatusBC1SAMN41005275-780
88GCA_025194085.1Lactobacillus crispatusCIRM-BIA 2111SAMN10365340-787
89GCA_038001405.1Lactobacillus crispatusLMG 12003SAMN33861689Homo sapiens787
90GCA_016161995.1Lactobacillus crispatusLB68SAMN15357373Gallus gallus789
91GCA_038001425.1Lactobacillus crispatusLMG 12005SAMN33861690Homo sapiens790
92GCA_008694965.1Lactobacillus crispatusNCK777SAMN12667792-791
93GCA_025194105.1Lactobacillus crispatusCIRM-BIA 2112SAMN10365339-797
94GCA_008868575.1Lactobacillus crispatusBIO6272SAMN12856537Homo sapiens800
95GCA_038001465.1Lactobacillus crispatusLMG11440SAMN33861691Homo sapiens802
96GCA_013487905.1Lactobacillus crispatus1DSAMN13624824Equus caballus809
97GCA_038001325.1Lactobacillus crispatusLMG 18200SAMN33861694Homo sapiens812
98GCA_001541385.1Lactobacillus crispatusVMC3SAMN03893601Homo sapiens815
99GCA_038001345.1Lactobacillus crispatusLMG 18199SAMN33861693Homo sapiens816
100GCA_000161915.2Lactobacillus crispatus MV-1A-USMV-1A-USSAMN02463726Homo sapiens821