Search results for phylogenetically related strains

 

Rank Compare Genome ID Species Strain BioSample ID Host Allelic distance ARGs VFs PGs PPRS
1GCA_008694205.1Lactobacillus crispatusNCK971SAMN12667796chicken0
2GCA_008694785.1Lactobacillus crispatusNCK988SAMN12667802chicken32
3GCA_008694925.1Lactobacillus crispatusNCK969SAMN12667795chicken112
4GCA_008694765.1Lactobacillus crispatusNCK978SAMN12667801chicken526
5GCA_008694865.1Lactobacillus crispatusNCK973SAMN12667798chicken526
6GCA_008694885.1Lactobacillus crispatusNCK972SAMN12667797chicken526
7GCA_008694875.1Lactobacillus crispatusNCK977SAMN12667800chicken540
8GCA_008694845.1Lactobacillus crispatusNCK974SAMN12667799chicken565
9GCA_008694935.1Lactobacillus crispatusNCK967SAMN12667794chicken566
10GCA_002218685.1Lactobacillus crispatusUMNLC8SAMN04498980Meleagris gallopavo702
11GCA_002218815.1Lactobacillus crispatusUMNLC11SAMN04498983Meleagris gallopavo702
12GCA_002218845.1Lactobacillus crispatusUMNLC13SAMN04498985Meleagris gallopavo702
13GCA_002218895.1Lactobacillus crispatusUMNLC15SAMN04498987Meleagris gallopavo706
14GCA_002218805.1Lactobacillus crispatusUMNLC10SAMN04498982Meleagris gallopavo707
15GCA_025194115.1Lactobacillus crispatusCIRM-BIA 523SAMN10365338-707
16GCA_965135635.1Lactobacillus crispatusCIP103602SAMEA117660302-707
17GCA_002218775.1Lactobacillus crispatusUMNLC7SAMN04498979Meleagris gallopavo708
18GCA_002218695.1Lactobacillus crispatusUMNLC6SAMN04498978Meleagris gallopavo709
19GCA_002218925.1Lactobacillus crispatusUMNLC16SAMN04498988Meleagris gallopavo710
20GCA_001704465.1Lactobacillus crispatusC25SAMN05513271Gallus gallus711
21GCA_002218855.1Lactobacillus crispatusUMNLC12SAMN04498984Meleagris gallopavo711
22GCA_009933525.1Lactobacillus crispatusC25SAMN13634618Gallus gallus711
23GCA_016162055.1Lactobacillus crispatusLB64SAMN15357369Gallus gallus712
24GCA_002218735.1Lactobacillus crispatusUMNLC9SAMN04498981Meleagris gallopavo717
25GCA_002218765.1Lactobacillus crispatusUMNLC5SAMN04498977Meleagris gallopavo717
26GCA_002218885.1Lactobacillus crispatusUMNLC14SAMN04498986Meleagris gallopavo718
27GCA_009769205.1Lactobacillus crispatusDC21.1SAMN11372136Gallus gallus718
28GCA_016162005.1Lactobacillus crispatusLB67SAMN15357372Gallus gallus718
29GCA_008694775.1Lactobacillus crispatusNCK2487SAMN12667804turkey724
30GCA_047782765.1Lactobacillus crispatusT31eSAMN46547635turkey724
31GCA_002218565.1Lactobacillus crispatusUMNLC2SAMN04498974Meleagris gallopavo726
32GCA_002218645.1Lactobacillus crispatusUMNLC3SAMN04498975Meleagris gallopavo726
33GCA_002218655.1Lactobacillus crispatusUMNLC4SAMN04498976Meleagris gallopavo726
34GCA_002218975.1Lactobacillus crispatusUMNLC20SAMN04498992Meleagris gallopavo729
35GCA_002219005.1Lactobacillus crispatusUMNLC21SAMN04498993Meleagris gallopavo729
36GCA_002218615.1Lactobacillus crispatusUMNLC1SAMN04498973Meleagris gallopavo730
37GCA_002219015.1Lactobacillus crispatusUMNLC24SAMN04498996Meleagris gallopavo730
38GCA_002219045.1Lactobacillus crispatusUMNLC22SAMN04498994Meleagris gallopavo730
39GCA_002219055.1Lactobacillus crispatusUMNLC25SAMN04498997Meleagris gallopavo730
40GCA_002219085.1Lactobacillus crispatusUMNLC23SAMN04498995Meleagris gallopavo730
41GCA_014982905.1Lactobacillus crispatusDSM 108970SAMN16401879Gallus gallus731
42GCA_012843585.1Lactobacillus crispatusWCA-383-APC-5ESAMN14558270Sus scrofa domesticus732
43GCA_013456995.1Lactobacillus crispatusB4SAMN15516019Homo sapiens740
44GCA_038001365.1Lactobacillus crispatusLMG 11415SAMN33861695Homo sapiens746
45GCA_016161975.1Lactobacillus crispatusLB69SAMN15357374Gallus gallus749
46GCA_016901535.1Lactobacillus crispatusAn726SAMN14913593Gallus gallus751
47GCA_030213555.1Lactobacillus crispatusUMB9226SAMN34996707Homo sapiens751
48GCA_002218945.1Lactobacillus crispatusUMNLC18SAMN04498990Meleagris gallopavo753
49GCA_002218965.1Lactobacillus crispatusUMNLC19SAMN04498991Meleagris gallopavo753
50GCA_009857395.1Lactobacillus crispatusIndica2SAMN13743077Homo sapiens753
51GCA_030373605.1Lactobacillus crispatus140_Shaedl_plusKSAMN34359386Gallus gallus753
52GCA_038001385.1Lactobacillus crispatusLMG 18189SAMN33861692Homo sapiens753
53GCA_002861805.1Lactobacillus crispatusUMB0824SAMN08193690Homo sapiens754
54GCA_030212645.1Lactobacillus crispatusUMB9873SAMN34996756Homo sapiens757
55GCA_007713895.1Lactobacillus crispatusNCK1350SAMN10922320Homo sapiens758
56GCA_013778545.1Lactobacillus crispatusDSM 29598SAMN14448840-759
57GCA_000091765.1Lactobacillus crispatus ST1ST1SAMEA2272191-761
58GCA_001434005.1Lactobacillus crispatus DSM 20584 = JCM 1185 = ATCC 33820DSM 20584SAMN02369387-761
59GCA_002811165.1Lactobacillus crispatusDISK12SAMN05770992Homo sapiens761
60GCA_008694755.1Lactobacillus crispatusNCK2488SAMN12667805Homo sapiens761
61GCA_018987235.1Lactobacillus crispatusATCC 33820SAMN18472633Homo sapiens761
62GCA_019537355.1Lactobacillus crispatusUBLCp-01SAMN20447867Homo sapiens761
63GCA_033803605.1Lactobacillus crispatusUMB5393SAMN38148654Homo sapiens761
64GCA_033803625.1Lactobacillus crispatusUMB5409SAMN38148653Homo sapiens761
65GCA_033803925.1Lactobacillus crispatusUMB6018SAMN38148638Homo sapiens761
66GCA_033803945.1Lactobacillus crispatusUMB6035SAMN38148636Homo sapiens761
67GCA_033803985.1Lactobacillus crispatusUMB6021SAMN38148637Homo sapiens761
68GCA_002088015.1Lactobacillus crispatusATCC 33820SAMN06624125-762
69GCA_032376685.1Lactobacillus crispatusUMB4356SAMN37434649Homo sapiens762
70GCA_019278055.1Lactobacillus crispatus8.2SAMN18809434Homo sapiens766
71GCA_019278105.1Lactobacillus crispatus5.1SAMN18809432Homo sapiens766
72GCA_019278135.1Lactobacillus crispatus7.2SAMN18809433Homo sapiens766
73GCA_000497065.1Lactobacillus crispatus EM-LC1EM-LC1SAMN02471465Homo sapiens767
74GCA_008694745.1Lactobacillus crispatusNCK1351SAMN12667803Homo sapiens771
75GCA_014654865.1Lactobacillus crispatusBC5SAMN13648610Homo sapiens771
76GCA_016161995.1Lactobacillus crispatusLB68SAMN15357373Gallus gallus779
77GCA_002863245.1Lactobacillus crispatusUMB0040SAMN08193691Homo sapiens782
78GCA_040109495.1Lactobacillus crispatusBC1SAMN41005275-782
79GCA_030230975.1Lactobacillus crispatusUMB1096ASAMN35153857Homo sapiens783
80GCA_002861815.1Lactobacillus crispatusUMB0085SAMN08193689Homo sapiens784
81GCA_008694975.1Lactobacillus crispatusNCK953SAMN12667793chicken785
82GCA_008694985.1Lactobacillus crispatusNCK96SAMN12667791Homo sapiens785
83GCA_016161925.1Lactobacillus crispatusLB70SAMN15357375Gallus gallus786
84GCA_025194085.1Lactobacillus crispatusCIRM-BIA 2111SAMN10365340-792
85GCA_038001405.1Lactobacillus crispatusLMG 12003SAMN33861689Homo sapiens792
86GCA_008694965.1Lactobacillus crispatusNCK777SAMN12667792-793
87GCA_030214445.1Lactobacillus crispatusUMB8789SAMN34996665Homo sapiens793
88GCA_016162105.1Lactobacillus crispatusLB65SAMN15357370Gallus gallus794
89GCA_038001425.1Lactobacillus crispatusLMG 12005SAMN33861690Homo sapiens794
90GCA_032376945.1Lactobacillus crispatusUMB5661SAMN37434658Homo sapiens795
91GCA_032376885.1Lactobacillus crispatusUMB6244SAMN37434651Homo sapiens796
92GCA_016162045.1Lactobacillus crispatusLB66SAMN15357371Gallus gallus798
93GCA_025194105.1Lactobacillus crispatusCIRM-BIA 2112SAMN10365339-803
94GCA_008868575.1Lactobacillus crispatusBIO6272SAMN12856537Homo sapiens804
95GCA_038001465.1Lactobacillus crispatusLMG11440SAMN33861691Homo sapiens805
96GCA_038001325.1Lactobacillus crispatusLMG 18200SAMN33861694Homo sapiens808
97GCA_038001345.1Lactobacillus crispatusLMG 18199SAMN33861693Homo sapiens813
98GCA_001541385.1Lactobacillus crispatusVMC3SAMN03893601Homo sapiens814
99GCA_013487905.1Lactobacillus crispatus1DSAMN13624824Equus caballus821
100GCA_016093195.1Lactobacillus crispatusC0176A1SAMN17001304Homo sapiens827