Search results for phylogenetically related strains

 

Rank Compare Genome ID Species Strain BioSample ID Host Allelic distance ARGs VFs PGs PPRS
1GCA_008694785.1Lactobacillus crispatusNCK988SAMN12667802chicken0
2GCA_008694205.1Lactobacillus crispatusNCK971SAMN12667796chicken32
3GCA_008694925.1Lactobacillus crispatusNCK969SAMN12667795chicken95
4GCA_008694885.1Lactobacillus crispatusNCK972SAMN12667797chicken528
5GCA_008694865.1Lactobacillus crispatusNCK973SAMN12667798chicken530
6GCA_008694765.1Lactobacillus crispatusNCK978SAMN12667801chicken531
7GCA_008694875.1Lactobacillus crispatusNCK977SAMN12667800chicken544
8GCA_008694935.1Lactobacillus crispatusNCK967SAMN12667794chicken566
9GCA_008694845.1Lactobacillus crispatusNCK974SAMN12667799chicken567
10GCA_002218685.1Lactobacillus crispatusUMNLC8SAMN04498980Meleagris gallopavo705
11GCA_002218815.1Lactobacillus crispatusUMNLC11SAMN04498983Meleagris gallopavo705
12GCA_002218845.1Lactobacillus crispatusUMNLC13SAMN04498985Meleagris gallopavo705
13GCA_002218895.1Lactobacillus crispatusUMNLC15SAMN04498987Meleagris gallopavo709
14GCA_002218805.1Lactobacillus crispatusUMNLC10SAMN04498982Meleagris gallopavo710
15GCA_002218775.1Lactobacillus crispatusUMNLC7SAMN04498979Meleagris gallopavo711
16GCA_025194115.1Lactobacillus crispatusCIRM-BIA 523SAMN10365338-711
17GCA_965135635.1Lactobacillus crispatusCIP103602SAMEA117660302-711
18GCA_002218695.1Lactobacillus crispatusUMNLC6SAMN04498978Meleagris gallopavo712
19GCA_002218855.1Lactobacillus crispatusUMNLC12SAMN04498984Meleagris gallopavo712
20GCA_002218925.1Lactobacillus crispatusUMNLC16SAMN04498988Meleagris gallopavo713
21GCA_016162055.1Lactobacillus crispatusLB64SAMN15357369Gallus gallus714
22GCA_001704465.1Lactobacillus crispatusC25SAMN05513271Gallus gallus715
23GCA_009933525.1Lactobacillus crispatusC25SAMN13634618Gallus gallus715
24GCA_002218735.1Lactobacillus crispatusUMNLC9SAMN04498981Meleagris gallopavo716
25GCA_002218765.1Lactobacillus crispatusUMNLC5SAMN04498977Meleagris gallopavo721
26GCA_002218885.1Lactobacillus crispatusUMNLC14SAMN04498986Meleagris gallopavo721
27GCA_009769205.1Lactobacillus crispatusDC21.1SAMN11372136Gallus gallus722
28GCA_016162005.1Lactobacillus crispatusLB67SAMN15357372Gallus gallus722
29GCA_008694775.1Lactobacillus crispatusNCK2487SAMN12667804turkey727
30GCA_047782765.1Lactobacillus crispatusT31eSAMN46547635turkey727
31GCA_002218565.1Lactobacillus crispatusUMNLC2SAMN04498974Meleagris gallopavo729
32GCA_002218645.1Lactobacillus crispatusUMNLC3SAMN04498975Meleagris gallopavo729
33GCA_002218655.1Lactobacillus crispatusUMNLC4SAMN04498976Meleagris gallopavo729
34GCA_002218975.1Lactobacillus crispatusUMNLC20SAMN04498992Meleagris gallopavo731
35GCA_002219005.1Lactobacillus crispatusUMNLC21SAMN04498993Meleagris gallopavo731
36GCA_002218615.1Lactobacillus crispatusUMNLC1SAMN04498973Meleagris gallopavo732
37GCA_002219015.1Lactobacillus crispatusUMNLC24SAMN04498996Meleagris gallopavo732
38GCA_002219045.1Lactobacillus crispatusUMNLC22SAMN04498994Meleagris gallopavo732
39GCA_002219055.1Lactobacillus crispatusUMNLC25SAMN04498997Meleagris gallopavo732
40GCA_002219085.1Lactobacillus crispatusUMNLC23SAMN04498995Meleagris gallopavo732
41GCA_014982905.1Lactobacillus crispatusDSM 108970SAMN16401879Gallus gallus734
42GCA_012843585.1Lactobacillus crispatusWCA-383-APC-5ESAMN14558270Sus scrofa domesticus735
43GCA_013456995.1Lactobacillus crispatusB4SAMN15516019Homo sapiens742
44GCA_016161975.1Lactobacillus crispatusLB69SAMN15357374Gallus gallus751
45GCA_038001365.1Lactobacillus crispatusLMG 11415SAMN33861695Homo sapiens751
46GCA_016901535.1Lactobacillus crispatusAn726SAMN14913593Gallus gallus752
47GCA_030373605.1Lactobacillus crispatus140_Shaedl_plusKSAMN34359386Gallus gallus753
48GCA_030213555.1Lactobacillus crispatusUMB9226SAMN34996707Homo sapiens754
49GCA_002218945.1Lactobacillus crispatusUMNLC18SAMN04498990Meleagris gallopavo755
50GCA_002218965.1Lactobacillus crispatusUMNLC19SAMN04498991Meleagris gallopavo755
51GCA_009857395.1Lactobacillus crispatusIndica2SAMN13743077Homo sapiens756
52GCA_038001385.1Lactobacillus crispatusLMG 18189SAMN33861692Homo sapiens756
53GCA_002861805.1Lactobacillus crispatusUMB0824SAMN08193690Homo sapiens757
54GCA_030212645.1Lactobacillus crispatusUMB9873SAMN34996756Homo sapiens759
55GCA_000091765.1Lactobacillus crispatus ST1ST1SAMEA2272191-761
56GCA_013778545.1Lactobacillus crispatusDSM 29598SAMN14448840-761
57GCA_007713895.1Lactobacillus crispatusNCK1350SAMN10922320Homo sapiens763
58GCA_002811165.1Lactobacillus crispatusDISK12SAMN05770992Homo sapiens764
59GCA_001434005.1Lactobacillus crispatus DSM 20584 = JCM 1185 = ATCC 33820DSM 20584SAMN02369387-765
60GCA_008694755.1Lactobacillus crispatusNCK2488SAMN12667805Homo sapiens765
61GCA_018987235.1Lactobacillus crispatusATCC 33820SAMN18472633Homo sapiens765
62GCA_019537355.1Lactobacillus crispatusUBLCp-01SAMN20447867Homo sapiens765
63GCA_002088015.1Lactobacillus crispatusATCC 33820SAMN06624125-766
64GCA_033803605.1Lactobacillus crispatusUMB5393SAMN38148654Homo sapiens766
65GCA_033803625.1Lactobacillus crispatusUMB5409SAMN38148653Homo sapiens766
66GCA_033803925.1Lactobacillus crispatusUMB6018SAMN38148638Homo sapiens766
67GCA_033803945.1Lactobacillus crispatusUMB6035SAMN38148636Homo sapiens766
68GCA_033803985.1Lactobacillus crispatusUMB6021SAMN38148637Homo sapiens766
69GCA_032376685.1Lactobacillus crispatusUMB4356SAMN37434649Homo sapiens767
70GCA_019278055.1Lactobacillus crispatus8.2SAMN18809434Homo sapiens769
71GCA_019278105.1Lactobacillus crispatus5.1SAMN18809432Homo sapiens769
72GCA_019278135.1Lactobacillus crispatus7.2SAMN18809433Homo sapiens769
73GCA_014654865.1Lactobacillus crispatusBC5SAMN13648610Homo sapiens772
74GCA_000497065.1Lactobacillus crispatus EM-LC1EM-LC1SAMN02471465Homo sapiens773
75GCA_008694745.1Lactobacillus crispatusNCK1351SAMN12667803Homo sapiens776
76GCA_016161995.1Lactobacillus crispatusLB68SAMN15357373Gallus gallus780
77GCA_040109495.1Lactobacillus crispatusBC1SAMN41005275-783
78GCA_002861815.1Lactobacillus crispatusUMB0085SAMN08193689Homo sapiens785
79GCA_002863245.1Lactobacillus crispatusUMB0040SAMN08193691Homo sapiens785
80GCA_030230975.1Lactobacillus crispatusUMB1096ASAMN35153857Homo sapiens786
81GCA_008694975.1Lactobacillus crispatusNCK953SAMN12667793chicken787
82GCA_008694985.1Lactobacillus crispatusNCK96SAMN12667791Homo sapiens787
83GCA_016161925.1Lactobacillus crispatusLB70SAMN15357375Gallus gallus790
84GCA_025194085.1Lactobacillus crispatusCIRM-BIA 2111SAMN10365340-794
85GCA_038001405.1Lactobacillus crispatusLMG 12003SAMN33861689Homo sapiens794
86GCA_016162045.1Lactobacillus crispatusLB66SAMN15357371Gallus gallus795
87GCA_008694965.1Lactobacillus crispatusNCK777SAMN12667792-796
88GCA_016162105.1Lactobacillus crispatusLB65SAMN15357370Gallus gallus796
89GCA_030214445.1Lactobacillus crispatusUMB8789SAMN34996665Homo sapiens796
90GCA_038001425.1Lactobacillus crispatusLMG 12005SAMN33861690Homo sapiens796
91GCA_032376945.1Lactobacillus crispatusUMB5661SAMN37434658Homo sapiens798
92GCA_032376885.1Lactobacillus crispatusUMB6244SAMN37434651Homo sapiens799
93GCA_025194105.1Lactobacillus crispatusCIRM-BIA 2112SAMN10365339-805
94GCA_008868575.1Lactobacillus crispatusBIO6272SAMN12856537Homo sapiens806
95GCA_038001465.1Lactobacillus crispatusLMG11440SAMN33861691Homo sapiens807
96GCA_038001325.1Lactobacillus crispatusLMG 18200SAMN33861694Homo sapiens808
97GCA_038001345.1Lactobacillus crispatusLMG 18199SAMN33861693Homo sapiens813
98GCA_001541385.1Lactobacillus crispatusVMC3SAMN03893601Homo sapiens814
99GCA_013487905.1Lactobacillus crispatus1DSAMN13624824Equus caballus823
100GCA_016093195.1Lactobacillus crispatusC0176A1SAMN17001304Homo sapiens827