Search results for phylogenetically related strains

 

Rank Compare Genome ID Species Strain BioSample ID Host Allelic distance ARGs VFs PGs PPRS
1GCA_008694935.1Lactobacillus crispatusNCK967SAMN12667794chicken0
2GCA_008694845.1Lactobacillus crispatusNCK974SAMN12667799chicken4
3GCA_008694885.1Lactobacillus crispatusNCK972SAMN12667797chicken115
4GCA_008694765.1Lactobacillus crispatusNCK978SAMN12667801chicken118
5GCA_008694865.1Lactobacillus crispatusNCK973SAMN12667798chicken118
6GCA_008694875.1Lactobacillus crispatusNCK977SAMN12667800chicken154
7GCA_008694925.1Lactobacillus crispatusNCK969SAMN12667795chicken562
8GCA_008694205.1Lactobacillus crispatusNCK971SAMN12667796chicken566
9GCA_008694785.1Lactobacillus crispatusNCK988SAMN12667802chicken566
10GCA_002218695.1Lactobacillus crispatusUMNLC6SAMN04498978Meleagris gallopavo705
11GCA_025194115.1Lactobacillus crispatusCIRM-BIA 523SAMN10365338-705
12GCA_965135635.1Lactobacillus crispatusCIP103602SAMEA117660302-705
13GCA_002218805.1Lactobacillus crispatusUMNLC10SAMN04498982Meleagris gallopavo706
14GCA_002218765.1Lactobacillus crispatusUMNLC5SAMN04498977Meleagris gallopavo709
15GCA_016162055.1Lactobacillus crispatusLB64SAMN15357369Gallus gallus709
16GCA_002218855.1Lactobacillus crispatusUMNLC12SAMN04498984Meleagris gallopavo710
17GCA_002218775.1Lactobacillus crispatusUMNLC7SAMN04498979Meleagris gallopavo713
18GCA_002218885.1Lactobacillus crispatusUMNLC14SAMN04498986Meleagris gallopavo713
19GCA_001704465.1Lactobacillus crispatusC25SAMN05513271Gallus gallus715
20GCA_002218685.1Lactobacillus crispatusUMNLC8SAMN04498980Meleagris gallopavo715
21GCA_002218815.1Lactobacillus crispatusUMNLC11SAMN04498983Meleagris gallopavo715
22GCA_002218845.1Lactobacillus crispatusUMNLC13SAMN04498985Meleagris gallopavo715
23GCA_002218925.1Lactobacillus crispatusUMNLC16SAMN04498988Meleagris gallopavo715
24GCA_009769205.1Lactobacillus crispatusDC21.1SAMN11372136Gallus gallus715
25GCA_009933525.1Lactobacillus crispatusC25SAMN13634618Gallus gallus715
26GCA_016162005.1Lactobacillus crispatusLB67SAMN15357372Gallus gallus716
27GCA_002218895.1Lactobacillus crispatusUMNLC15SAMN04498987Meleagris gallopavo717
28GCA_002218615.1Lactobacillus crispatusUMNLC1SAMN04498973Meleagris gallopavo726
29GCA_002218975.1Lactobacillus crispatusUMNLC20SAMN04498992Meleagris gallopavo728
30GCA_002219005.1Lactobacillus crispatusUMNLC21SAMN04498993Meleagris gallopavo728
31GCA_002219015.1Lactobacillus crispatusUMNLC24SAMN04498996Meleagris gallopavo729
32GCA_002219045.1Lactobacillus crispatusUMNLC22SAMN04498994Meleagris gallopavo729
33GCA_002219055.1Lactobacillus crispatusUMNLC25SAMN04498997Meleagris gallopavo729
34GCA_002219085.1Lactobacillus crispatusUMNLC23SAMN04498995Meleagris gallopavo729
35GCA_047782765.1Lactobacillus crispatusT31eSAMN46547635turkey730
36GCA_014982905.1Lactobacillus crispatusDSM 108970SAMN16401879Gallus gallus731
37GCA_002218565.1Lactobacillus crispatusUMNLC2SAMN04498974Meleagris gallopavo732
38GCA_002218645.1Lactobacillus crispatusUMNLC3SAMN04498975Meleagris gallopavo732
39GCA_002218655.1Lactobacillus crispatusUMNLC4SAMN04498976Meleagris gallopavo732
40GCA_002218735.1Lactobacillus crispatusUMNLC9SAMN04498981Meleagris gallopavo732
41GCA_012843585.1Lactobacillus crispatusWCA-383-APC-5ESAMN14558270Sus scrofa domesticus732
42GCA_030373605.1Lactobacillus crispatus140_Shaedl_plusKSAMN34359386Gallus gallus734
43GCA_038001365.1Lactobacillus crispatusLMG 11415SAMN33861695Homo sapiens738
44GCA_008694775.1Lactobacillus crispatusNCK2487SAMN12667804turkey741
45GCA_030212645.1Lactobacillus crispatusUMB9873SAMN34996756Homo sapiens741
46GCA_016901535.1Lactobacillus crispatusAn726SAMN14913593Gallus gallus742
47GCA_030213555.1Lactobacillus crispatusUMB9226SAMN34996707Homo sapiens742
48GCA_013456995.1Lactobacillus crispatusB4SAMN15516019Homo sapiens744
49GCA_002861805.1Lactobacillus crispatusUMB0824SAMN08193690Homo sapiens745
50GCA_002218945.1Lactobacillus crispatusUMNLC18SAMN04498990Meleagris gallopavo749
51GCA_002218965.1Lactobacillus crispatusUMNLC19SAMN04498991Meleagris gallopavo749
52GCA_007713895.1Lactobacillus crispatusNCK1350SAMN10922320Homo sapiens750
53GCA_016161975.1Lactobacillus crispatusLB69SAMN15357374Gallus gallus750
54GCA_032376685.1Lactobacillus crispatusUMB4356SAMN37434649Homo sapiens751
55GCA_033803605.1Lactobacillus crispatusUMB5393SAMN38148654Homo sapiens753
56GCA_033803625.1Lactobacillus crispatusUMB5409SAMN38148653Homo sapiens753
57GCA_033803945.1Lactobacillus crispatusUMB6035SAMN38148636Homo sapiens753
58GCA_033803985.1Lactobacillus crispatusUMB6021SAMN38148637Homo sapiens753
59GCA_033803925.1Lactobacillus crispatusUMB6018SAMN38148638Homo sapiens754
60GCA_000091765.1Lactobacillus crispatus ST1ST1SAMEA2272191-758
61GCA_013778545.1Lactobacillus crispatusDSM 29598SAMN14448840-758
62GCA_038001385.1Lactobacillus crispatusLMG 18189SAMN33861692Homo sapiens759
63GCA_009857395.1Lactobacillus crispatusIndica2SAMN13743077Homo sapiens763
64GCA_008694975.1Lactobacillus crispatusNCK953SAMN12667793chicken764
65GCA_008694985.1Lactobacillus crispatusNCK96SAMN12667791Homo sapiens764
66GCA_001434005.1Lactobacillus crispatus DSM 20584 = JCM 1185 = ATCC 33820DSM 20584SAMN02369387-767
67GCA_008694755.1Lactobacillus crispatusNCK2488SAMN12667805Homo sapiens767
68GCA_018987235.1Lactobacillus crispatusATCC 33820SAMN18472633Homo sapiens767
69GCA_019537355.1Lactobacillus crispatusUBLCp-01SAMN20447867Homo sapiens767
70GCA_002088015.1Lactobacillus crispatusATCC 33820SAMN06624125-768
71GCA_002811165.1Lactobacillus crispatusDISK12SAMN05770992Homo sapiens769
72GCA_016162105.1Lactobacillus crispatusLB65SAMN15357370Gallus gallus769
73GCA_000497065.1Lactobacillus crispatus EM-LC1EM-LC1SAMN02471465Homo sapiens770
74GCA_008694745.1Lactobacillus crispatusNCK1351SAMN12667803Homo sapiens771
75GCA_002863245.1Lactobacillus crispatusUMB0040SAMN08193691Homo sapiens773
76GCA_030230975.1Lactobacillus crispatusUMB1096ASAMN35153857Homo sapiens773
77GCA_016161925.1Lactobacillus crispatusLB70SAMN15357375Gallus gallus775
78GCA_019278055.1Lactobacillus crispatus8.2SAMN18809434Homo sapiens777
79GCA_019278105.1Lactobacillus crispatus5.1SAMN18809432Homo sapiens777
80GCA_019278135.1Lactobacillus crispatus7.2SAMN18809433Homo sapiens777
81GCA_030214445.1Lactobacillus crispatusUMB8789SAMN34996665Homo sapiens779
82GCA_002861815.1Lactobacillus crispatusUMB0085SAMN08193689Homo sapiens780
83GCA_014654865.1Lactobacillus crispatusBC5SAMN13648610Homo sapiens782
84GCA_032376945.1Lactobacillus crispatusUMB5661SAMN37434658Homo sapiens783
85GCA_032376885.1Lactobacillus crispatusUMB6244SAMN37434651Homo sapiens784
86GCA_040109495.1Lactobacillus crispatusBC1SAMN41005275-792
87GCA_016162045.1Lactobacillus crispatusLB66SAMN15357371Gallus gallus793
88GCA_025194085.1Lactobacillus crispatusCIRM-BIA 2111SAMN10365340-795
89GCA_038001425.1Lactobacillus crispatusLMG 12005SAMN33861690Homo sapiens795
90GCA_038001405.1Lactobacillus crispatusLMG 12003SAMN33861689Homo sapiens796
91GCA_008694965.1Lactobacillus crispatusNCK777SAMN12667792-797
92GCA_016161995.1Lactobacillus crispatusLB68SAMN15357373Gallus gallus797
93GCA_038001325.1Lactobacillus crispatusLMG 18200SAMN33861694Homo sapiens804
94GCA_025194105.1Lactobacillus crispatusCIRM-BIA 2112SAMN10365339-807
95GCA_008868575.1Lactobacillus crispatusBIO6272SAMN12856537Homo sapiens809
96GCA_038001465.1Lactobacillus crispatusLMG11440SAMN33861691Homo sapiens810
97GCA_038001345.1Lactobacillus crispatusLMG 18199SAMN33861693Homo sapiens811
98GCA_001541385.1Lactobacillus crispatusVMC3SAMN03893601Homo sapiens813
99GCA_002863485.1Lactobacillus crispatusUMB0054SAMN08193693Homo sapiens821
100GCA_027584215.1Lactobacillus crispatusC0086F8SAMN25046006Homo sapiens822