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Rank	Genome ID	Species	Strain	BioSample ID	Host	Allelic distance	ARGs	VFs	PGs	PPRS
1	GCA_009160775.1	Bifidobacterium bifidum	BIOML-A18	SAMN11944608	Homo sapiens	0	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
2	GCA_009159495.1	Bifidobacterium bifidum	BIOML-A24	SAMN11944614	Homo sapiens	171	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
3	GCA_009160825.1	Bifidobacterium bifidum	BIOML-A25	SAMN11944615	Homo sapiens	172	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
4	GCA_009078055.1	Bifidobacterium bifidum	BIOML-A11	SAMN11944601	Homo sapiens	174	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
5	GCA_009160885.1	Bifidobacterium bifidum	BIOML-A14	SAMN11944604	Homo sapiens	174	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
6	GCA_009160915.1	Bifidobacterium bifidum	BIOML-A15	SAMN11944605	Homo sapiens	174	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
7	GCA_009160905.1	Bifidobacterium bifidum	BIOML-A12	SAMN11944602	Homo sapiens	175	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
8	GCA_009159555.1	Bifidobacterium bifidum	BIOML-A19	SAMN11944609	Homo sapiens	176	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
9	GCA_009078115.1	Bifidobacterium bifidum	BIOML-A10	SAMN11944600	Homo sapiens	177	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
10	GCA_009159095.1	Bifidobacterium bifidum	BIOML-A21	SAMN11944611	Homo sapiens	177	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
11	GCA_009159505.1	Bifidobacterium bifidum	BIOML-A20	SAMN11944610	Homo sapiens	177	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
12	GCA_009160945.1	Bifidobacterium bifidum	BIOML-A13	SAMN11944603	Homo sapiens	178	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
13	GCA_009160845.1	Bifidobacterium bifidum	BIOML-A17	SAMN11944607	Homo sapiens	229	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
14	GCA_009160865.1	Bifidobacterium bifidum	BIOML-A16	SAMN11944606	Homo sapiens	276	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
15	GCA_028202395.1	Bifidobacterium bifidum	J1101312st1_E10_J1101312_190322	SAMN31321382	Homo sapiens	953	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
16	GCA_028202415.1	Bifidobacterium bifidum	J1101312st1_C7_J1101312_190322	SAMN31321381	Homo sapiens	953	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
17	GCA_028203675.1	Bifidobacterium bifidum	J1101312st1_H2_J1101312_190322	SAMN31321384	Homo sapiens	953	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
18	GCA_028203695.1	Bifidobacterium bifidum	J1101312st1_E3_J1101312_190322	SAMN31321383	Homo sapiens	953	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
19	GCA_028202855.1	Bifidobacterium bifidum	1001136st1_C1_1001136B_160425	SAMN31321326	Homo sapiens	998	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
20	GCA_028202055.1	Bifidobacterium bifidum	D31st1_E7_D31t1_170403	SAMN31321363	Homo sapiens	1044	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
21	GCA_028202075.1	Bifidobacterium bifidum	D31st1_A3_D31t1_170403	SAMN31321361	Homo sapiens	1044	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
22	GCA_028202095.1	Bifidobacterium bifidum	D31st1_B4_D31t1_170403	SAMN31321362	Homo sapiens	1044	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
23	GCA_028202015.1	Bifidobacterium bifidum	D52st1_E11_D52t1_170925	SAMN31321364	Homo sapiens	1049	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
24	GCA_028203495.1	Bifidobacterium bifidum	RTP21484st2_A9_RTP21484_190118	SAMN31321414	Homo sapiens	1049	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
25	GCA_028368265.1	Bifidobacterium bifidum	RTP21484st2_G9_RTP21484_190118	SAMN31321246	Homo sapiens	1049	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
26	GCA_900112465.1	Bifidobacterium bifidum	Calf96	SAMN05216254	-	1049	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
27	GCA_028202225.1	Bifidobacterium bifidum	1025st1_F12_1025SCRN_200924	SAMN31321352	Homo sapiens	1050	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
28	GCA_028202265.1	Bifidobacterium bifidum	1025st1_D2_1025SCRN_200924	SAMN31321350	Homo sapiens	1050	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
29	GCA_000300215.1	Bifidobacterium bifidum IPLA 20015	IPLA 20015	SAMN02470078	Homo sapiens	1051	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
30	GCA_001020405.1	Bifidobacterium bifidum	IPLA 20015	SAMN03103719	Homo sapiens	1051	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
31	GCA_028201935.1	Bifidobacterium bifidum	1025st1_E4_1025SCRN_200924	SAMN31321351	Homo sapiens	1051	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
32	GCA_039913395.1	Bifidobacterium bifidum	1025st1_C5_1025SCRN_200924	SAMN31321349	Homo sapiens	1051	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
33	GCA_028202255.1	Bifidobacterium bifidum	1025st1_B5_1025SCRN_200924	SAMN31321348	Homo sapiens	1052	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
34	GCA_028202305.1	Bifidobacterium bifidum	1025st1_A12_1025SCRN_200924	SAMN31321347	Homo sapiens	1052	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
35	GCA_001546225.1	Bifidobacterium bifidum	MJR8628B	SAMN03842220	Homo sapiens	1056	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
36	GCA_013867495.1	Bifidobacterium bifidum	s-1	SAMN15579835	-	1056	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
37	GCA_016307165.1	Bifidobacterium bifidum	UBBB-55	SAMN16793263	Homo sapiens	1056	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
38	GCA_000466525.1	Bifidobacterium bifidum ATCC 29521 = JCM 1255 = DSM 20456	ATCC 29521	SAMN02436821	Homo sapiens	1057	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
39	GCA_001025135.1	Bifidobacterium bifidum ATCC 29521 = JCM 1255 = DSM 20456	-	SAMD00061040	-	1057	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
40	GCA_900637095.1	Bifidobacterium bifidum	NCTC13001	SAMEA4063017	-	1057	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
41	GCA_000741085.1	Bifidobacterium bifidum	LMG 11041	SAMN02673426	Homo sapiens	1058	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
42	GCA_001020325.1	Bifidobacterium bifidum	LMG 13200	SAMN03097405	Homo sapiens	1058	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
43	GCA_017814645.1	Bifidobacterium bifidum	BB-G90	SAMN18436315	Homo sapiens	1059	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
44	GCA_017894325.1	Bifidobacterium bifidum	CNCM I-4319	SAMN15324980	Homo sapiens	1060	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
45	GCA_028201895.1	Bifidobacterium bifidum	G6_h1001283B150217_200217	SAMN31321369	Homo sapiens	1061	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
46	GCA_028201955.1	Bifidobacterium bifidum	C7_h1001283B150217_200217	SAMN31321368	Homo sapiens	1061	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
47	GCA_028202035.1	Bifidobacterium bifidum	B1_h1001283B150217_200217	SAMN31321367	Homo sapiens	1061	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
48	GCA_028202125.1	Bifidobacterium bifidum	1001283st1_F2_1001283B150304_161114	SAMN31321343	Homo sapiens	1061	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
49	GCA_028202155.1	Bifidobacterium bifidum	1001283st1_G4_1001283B150217_161031	SAMN31321346	Homo sapiens	1061	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
50	GCA_028202165.1	Bifidobacterium bifidum	1001283st1_F3_1001283B150210_160208	SAMN31321344	Homo sapiens	1061	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
51	GCA_028202215.1	Bifidobacterium bifidum	1001283st1_F5_1001283B150209_150212	SAMN31321345	Homo sapiens	1061	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
52	GCA_028202335.1	Bifidobacterium bifidum	1001283st1_A1_1001285H_161024	SAMN31321336	Homo sapiens	1061	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
53	GCA_028202355.1	Bifidobacterium bifidum	1001283st1_E8_1001285I_161205	SAMN31321342	Homo sapiens	1061	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
54	GCA_028202365.1	Bifidobacterium bifidum	1001283st1_B11_1001285I_161205	SAMN31321337	Homo sapiens	1061	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
55	GCA_028202575.1	Bifidobacterium bifidum	1001283st1_E8_1001283B150210_160208	SAMN31321341	Homo sapiens	1061	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
56	GCA_028202605.1	Bifidobacterium bifidum	1001283st1_D6_1001283B150209_150212	SAMN31321340	Homo sapiens	1061	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
57	GCA_028202725.1	Bifidobacterium bifidum	1001283st1_C8_1001283B150304_161114	SAMN31321339	Homo sapiens	1061	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
58	GCA_028203615.1	Bifidobacterium bifidum	A12_h1001283B150217_200217	SAMN31321372	Homo sapiens	1061	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
59	GCA_028203705.1	Bifidobacterium bifidum	G10_h1001283B150217_200217	SAMN31321380	Homo sapiens	1061	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
60	GCA_028203735.1	Bifidobacterium bifidum	F6_h1001283B150217_200217	SAMN31321377	Homo sapiens	1061	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
61	GCA_028203775.1	Bifidobacterium bifidum	F11_h1001283B150217_200217	SAMN31321378	Homo sapiens	1061	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
62	GCA_028203795.1	Bifidobacterium bifidum	C4_h1001283B150217_200217	SAMN31321375	Homo sapiens	1061	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
63	GCA_028203815.1	Bifidobacterium bifidum	F5_h1001283B150217_200217	SAMN31321376	Homo sapiens	1061	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
64	GCA_028203895.1	Bifidobacterium bifidum	H2_h1001283B150217_200217	SAMN31321370	Homo sapiens	1061	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
65	GCA_028202295.1	Bifidobacterium bifidum	1001283st1_C1_1001283B150225_161107	SAMN31321338	Homo sapiens	1062	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
66	GCA_028202555.1	Bifidobacterium bifidum	B6_h1001283B150217_200217	SAMN31321373	Homo sapiens	1062	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
67	GCA_028203875.1	Bifidobacterium bifidum	H3_h1001283B150217_200217	SAMN31321371	Homo sapiens	1062	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
68	GCA_039913365.1	Bifidobacterium bifidum	C1_h1001283B150217_200217	SAMN31321374	Homo sapiens	1062	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
69	GCA_040094955.1	Bifidobacterium bifidum	CLA-AA-H198	SAMN40631356	Homo sapiens	1062	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
70	GCA_003466365.1	Bifidobacterium bifidum	TM06-5	SAMN09736996	Homo sapiens	1063	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
71	GCA_003466395.1	Bifidobacterium bifidum	TM06-10	SAMN09736987	Homo sapiens	1063	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
72	GCA_028203745.1	Bifidobacterium bifidum	G8_h1001283B150217_200217	SAMN31321379	Homo sapiens	1063	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
73	GCA_045635495.1	Bifidobacterium bifidum	CGMCC No.29545	SAMN44616490	Homo sapiens	1063	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
74	GCA_003437945.1	Bifidobacterium bifidum	TF05-1	SAMN09736871	Homo sapiens	1065	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
75	GCA_028201965.1	Bifidobacterium bifidum	2226st1_E4_2226SCRN_200925	SAMN31321353	Homo sapiens	1065	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
76	GCA_046763285.1	Bifidobacterium bifidum	LHP007	SAMN46218889	Homo sapiens	1065	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
77	GCA_049204775.1	Bifidobacterium bifidum	IATA148	SAMN45053989	Homo sapiens	1065	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
78	GCA_039913355.1	Bifidobacterium bifidum	2226st1_G9_2226SCRN_200925	SAMN31321354	Homo sapiens	1066	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
79	GCA_011029205.1	Bifidobacterium bifidum	VA07-1AN	SAMN14087237	Homo sapiens	1067	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
80	GCA_003437175.1	Bifidobacterium bifidum	TF07-22	SAMN09736904	Homo sapiens	1068	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
81	GCA_002469385.1	Bifidobacterium bifidum	1 G1971	SAMN06759457	Homo sapiens	1069	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
82	GCA_003468415.1	Bifidobacterium bifidum	AM36-1AC	SAMN09736479	Homo sapiens	1069	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
83	GCA_003436635.1	Bifidobacterium bifidum	TM02-17	SAMN09736965	Homo sapiens	1070	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
84	GCA_003436655.1	Bifidobacterium bifidum	TM02-15	SAMN09736964	Homo sapiens	1070	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
85	GCA_003465425.1	Bifidobacterium bifidum	AF11-25B	SAMN09734209	Homo sapiens	1070	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
86	GCA_039913015.1	Bifidobacterium bifidum	RTP31036st1_A12_RTP31036_200814	SAMN31321415	Homo sapiens	1070	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
87	GCA_039913035.1	Bifidobacterium bifidum	RTP31036st1_G6_RTP31036_200814	SAMN31321416	Homo sapiens	1070	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
88	GCA_039913175.1	Bifidobacterium bifidum	RTP21221st1_A9_RTP21221_200709	SAMN31321405	Homo sapiens	1070	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
89	GCA_028203545.1	Bifidobacterium bifidum	B3_hBSD2780061687b_210117	SAMN31321397	Homo sapiens	1072	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
90	GCA_039913075.1	Bifidobacterium bifidum	RTP21222st1_F4_RTP21222_200807	SAMN31321410	Homo sapiens	1072	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
91	GCA_039913115.1	Bifidobacterium bifidum	RTP21221st1_H7_RTP21221_200709	SAMN31321408	Homo sapiens	1072	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
92	GCA_049192095.1	Bifidobacterium bifidum	IATA005	SAMN45053941	Homo sapiens	1072	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
93	GCA_000164965.1	Bifidobacterium bifidum S17	S17	SAMN02603395	-	1073	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
94	GCA_004167365.1	Bifidobacterium bifidum	ca_0067	SAMN10239585	Homo sapiens	1073	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
95	GCA_009077915.1	Bifidobacterium bifidum	BIOML-A8	SAMN11944598	Homo sapiens	1073	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
96	GCA_028202115.1	Bifidobacterium bifidum	BSD2780061688st1_G1_BSD2780061688b_171218	SAMN31321360	Homo sapiens	1073	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
97	GCA_028202185.1	Bifidobacterium bifidum	BSD2780061688st1_D1_BSD2780061688b_171218	SAMN31321359	Homo sapiens	1073	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
98	GCA_028202425.1	Bifidobacterium bifidum	A4_hBSD2780061687b_210117	SAMN31321396	Homo sapiens	1073	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
99	GCA_028202435.1	Bifidobacterium bifidum	F3_hBSD2780061687b_210117	SAMN31321402	Homo sapiens	1073	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
100	GCA_028202535.1	Bifidobacterium bifidum	E4_hBSD2780061687b_210117	SAMN31321400	Homo sapiens	1073	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score

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