Search results for phylogenetically related strains

 

Rank Compare Genome ID Species Strain BioSample ID Host Allelic distance ARGs VFs PGs PPRS
1GCA_012932815.1Lacticaseibacillus paracaseiUW1SAMN05660434-0
2GCA_012932835.1Lacticaseibacillus paracaseiCRF28SAMN05660651-45
3GCA_000309645.1Lacticaseibacillus paracaseiCRF28SAMN02472005Homo sapiens75
4GCA_003712785.1Lacticaseibacillus paracaseiFAM6161SAMN04088891-94
5GCA_003713005.1Lacticaseibacillus paracaseiFAM7821SAMN04088894-103
6GCA_030361365.1Lacticaseibacillus paracaseiTOM.9SAMN35776875-111
7GCA_028609725.1Lacticaseibacillus paracaseiCLP-C10SAMN14677579-132
8GCA_001895185.1Lacticaseibacillus paracasei-SAMD00029052-150
9GCA_044990665.1Lacticaseibacillus paracaseiFNCPS K7SAMN44657157-201
10GCA_046939035.1Lacticaseibacillus paracasei subsp. paracaseiM587ASAMN35847929wild boar258
11GCA_029625355.1Lacticaseibacillus paracaseiVHProbi OF10SAMN26144441-281
12GCA_007637635.1Lacticaseibacillus paracaseiNJSAMN12319598-282
13GCA_008329845.1Lacticaseibacillus paracasei10266SAMN09874024Homo sapiens292
14GCA_015319235.1Lacticaseibacillus paracasei subsp. toleransMGB0543SAMN16657553-292
15GCA_009931715.1Lacticaseibacillus paracaseiCACC 566SAMN13871807Canine317
16GCA_024637915.1Lacticaseibacillus paracaseiVHProbi F11SAMN27160580Homo sapiens317
17GCA_028322945.1Lacticaseibacillus paracasei1001295st1_G5_1001295H_181012SAMN31322639Homo sapiens317
18GCA_037283365.1Lacticaseibacillus paracaseiNRC_P5SAMN32629232buffalo317
19GCA_037283435.1Lacticaseibacillus paracaseiNRC_P6SAMN32629233buffalo317
20GCA_037283545.1Lacticaseibacillus paracaseiNRC_P3SAMN32629230cow317
21GCA_012955485.1Lacticaseibacillus paracasei347-16SAMN13259076Homo sapiens318
22GCA_029906365.1Lacticaseibacillus paracasei subsp. paracaseiMI3SAMN34106059Homo sapiens318
23GCA_002904305.1Lacticaseibacillus paracaseiCCC B1205SAMN03813856-325
24GCA_025757505.1Lacticaseibacillus paracaseiNG-LCU-ST2SAMN31037893Maize325
25GCA_001244395.1Lacticaseibacillus paracaseiL9SAMN03853751Homo sapiens326
26GCA_026013725.1Lacticaseibacillus paracaseiATG-E1SAMN31433209Hono sapiens328
27GCA_000410455.1Lacticaseibacillus paracasei subsp. paracasei Lpp43Lpp43SAMN02469725-334
28GCA_019990865.1Lacticaseibacillus paracaseicek-R2SAMN21367938beet336
29GCA_016890245.1Lacticaseibacillus paracaseiYT170SAMN17818118Rex rabbit337
30GCA_017638905.1Lacticaseibacillus paracaseiHL182SAMN18236778Homo sapiens337
31GCA_030480425.1Lacticaseibacillus paracaseiL14SAMN33263285-343
32GCA_015476175.1Lacticaseibacillus paracasei subsp. toleransMGB0747SAMN16668663-345
33GCA_015476195.1Lacticaseibacillus paracasei subsp. toleransMGB0761SAMN16668817-345
34GCA_028878105.1Lacticaseibacillus paracaseiTMW 1.300SAMN23708206-346
35GCA_036430865.1Lacticaseibacillus paracaseiFI11579SAMN33193087-353
36GCA_004078565.1Lacticaseibacillus paracaseiSRCM103424SAMN10743383-359
37GCA_013307125.1Lacticaseibacillus paracaseiLp02SAMN11489091Homo sapiens378
38GCA_042015765.1Lacticaseibacillus paracaseiZJUZ2-3SAMN43503360Homo sapiens379
39GCA_003966835.1Lacticaseibacillus paracasei-SAMD00094822-380
40GCA_036431975.1Lacticaseibacillus paracaseiCMAN-SucSAMN35624267-383
41GCA_032229185.1Lacticaseibacillus paracaseiNC4SAMN37472141-407
42GCA_036432035.1Lacticaseibacillus paracaseiLMAN-KhSAMN35624263-409
43GCA_003640765.1Lacticaseibacillus paracaseiUBLPC-35SAMN10147909-410
44GCA_002079285.1Lacticaseibacillus paracaseiIIASAMN04571918-417
45GCA_008369945.1Lacticaseibacillus paracaseiDTA93SAMN12661681Homo sapiens423
46GCA_025252385.1Lacticaseibacillus paracaseiVHProbi O44SAMN30550144Homo sapiens430
47GCA_025215665.1Lacticaseibacillus paracaseiALAC-4SAMN10688387-431
48GCA_025190665.1Lacticaseibacillus paracaseiCIRM-BIA 655SAMN10365443-437
49GCA_000309665.1Lacticaseibacillus paracaseiM36SAMN02472000-457
50GCA_022614605.1Lacticaseibacillus paracaseiGMNL-653SAMN22548460Homo sapiens462
51GCA_000410435.1Lacticaseibacillus paracasei subsp. paracasei CNCM I-4649CNCM I-4649SAMN02469704-471
52GCA_025190565.1Lacticaseibacillus paracaseiCIRM-BIA 2128SAMN10365446-475
53GCA_037414215.1Lacticaseibacillus paracaseiLPC100SAMN39212581Homo sapiens475
54GCA_003712965.1Lacticaseibacillus paracaseiFAM6410SAMN04088893-477
55GCA_025190525.1Lacticaseibacillus paracaseiCIRM-BIA 1517SAMN10365450-477
56GCA_016887785.1Lacticaseibacillus paracasei2306SAMN17562096-480
57GCA_025190725.1Lacticaseibacillus paracaseiCIRM-BIA 699SAMN10365439-480
58GCA_026797475.1Lacticaseibacillus paracaseiCBP-1042SAMN27675067-480
59GCA_003712565.1Lacticaseibacillus paracaseiFAM19317SAMN04088878-481
60GCA_003712985.1Lacticaseibacillus paracaseiFAM8140SAMN04088895-482
61GCA_015693945.1Lacticaseibacillus paracasei subsp. toleransZY-1SAMN16861159-482
62GCA_028878305.1Lacticaseibacillus paracaseiNRRL B-456SAMN23708197-482
63GCA_037283385.1Lacticaseibacillus paracaseiNRC_P4SAMN32629231cow482
64GCA_002148805.1Lacticaseibacillus paracaseiDPC4206SAMN06220137-485
65GCA_002148885.1Lacticaseibacillus paracaseiDPC4536SAMN06463780-485
66GCA_003434205.1Lacticaseibacillus paracaseiAM33-2ACSAMN09736452Homo sapiens485
67GCA_024498315.1Lacticaseibacillus paracaseiSMN-LBKSAMN29933592-485
68GCA_024622515.1Lacticaseibacillus paracaseiDSM 28675SAMN29593134Mus musculus485
69GCA_028320385.1Lacticaseibacillus paracasei1001270st1_F8_1001270H_150608SAMN31322638Homo sapiens485
70GCA_035586595.1Lacticaseibacillus paracaseiHP-B1337SAMN38922877-485
71GCA_036281375.1Lacticaseibacillus paracaseiCUL07ASAMN09708453-485
72GCA_040785095.1Lacticaseibacillus paracaseigbc_fSAMN41082101-485
73GCA_041283745.2Lacticaseibacillus paracaseiORD 0998SAMN43000418Homo sapiens485
74GCA_045808845.1Lacticaseibacillus paracaseiMSR2SAMN45146297-485
75GCA_048282615.1Lacticaseibacillus paracasei439SAMN46889214-485
76GCA_049191845.1Lacticaseibacillus paracaseiIATA110SAMN45053973Homo sapiens485
77GCA_049205075.1Lacticaseibacillus paracaseiIATA109SAMN45053972Homo sapiens485
78GCA_000309785.1Lacticaseibacillus paracaseiLpc-37SAMN02472013-486
79GCA_016757695.1Lacticaseibacillus paracasei subsp. toleransS-NBSAMN17359333-486
80GCA_016757675.1Lacticaseibacillus paracasei subsp. toleransS-NA5SAMN17359331-487
81GCA_030710015.1Lacticaseibacillus paracaseiULE721SAMN33593465-489
82GCA_026967245.1Lacticaseibacillus paracaseiLpc_yogurt_B6SAMN32062179-491
83GCA_041679805.1Lacticaseibacillus paracaseiAPYSAMN41163063Homo sapiens491
84GCA_009996805.1Lacticaseibacillus paracaseiD3-5SAMN13905290Homo sapiens492
85GCA_026967195.1Lacticaseibacillus paracaseiLpc_yogurt_B5SAMN32062178-492
86GCA_026967205.1Lacticaseibacillus paracaseiLpc_yogurt_B4SAMN32062177-492
87GCA_026967275.1Lacticaseibacillus paracaseiLpc_yogurt_B3SAMN32062176-492
88GCA_026967295.1Lacticaseibacillus paracaseiLpc_yogurt_B2SAMN32062175-492
89GCA_034044075.1Lacticaseibacillus paracaseiMP11ASAMN37950489-495
90GCA_041117985.1Lacticaseibacillus paracaseiMYA5SAMN42930119-495
91GCA_000410235.1Lacticaseibacillus paracasei subsp. paracasei Lpp74Lpp74SAMN02469728-498
92GCA_000410195.1Lacticaseibacillus paracasei subsp. paracasei Lpp219Lpp219SAMN02469710Homo sapiens501
93GCA_049201625.1Lacticaseibacillus paracaseiUBLPc-87SAMN47217620-501
94GCA_004141835.1Lacticaseibacillus paracaseiSRCM103299SAMN10849469-502
95GCA_034555155.1Lacticaseibacillus paracaseiRT4SAMN38857191Brachionus plicatilis545
96GCA_000410055.1Lacticaseibacillus paracasei subsp. paracasei Lpp227Lpp227SAMN02641494Homo sapiens546
97GCA_009823605.1Lacticaseibacillus paracaseiDTA72SAMN13679055Homo sapiens551
98GCA_003712245.1Lacticaseibacillus paracaseiFAM18108SAMN04088862-555
99GCA_000410095.1Lacticaseibacillus paracasei subsp. paracasei CNCM I-2877CNCM I-2877SAMN02641492-560
100GCA_000409975.1Lacticaseibacillus paracasei subsp. paracasei Lpp123Lpp123SAMN02469719-574