Search results for phylogenetically related strains

 

Rank Compare Genome ID Species Strain BioSample ID Host Allelic distance ARGs VFs PGs PPRS
1GCA_012932835.1Lacticaseibacillus paracaseiCRF28SAMN05660651-0
2GCA_000309645.1Lacticaseibacillus paracaseiCRF28SAMN02472005Homo sapiens34
3GCA_012932815.1Lacticaseibacillus paracaseiUW1SAMN05660434-45
4GCA_003712785.1Lacticaseibacillus paracaseiFAM6161SAMN04088891-56
5GCA_003713005.1Lacticaseibacillus paracaseiFAM7821SAMN04088894-62
6GCA_030361365.1Lacticaseibacillus paracaseiTOM.9SAMN35776875-69
7GCA_028609725.1Lacticaseibacillus paracaseiCLP-C10SAMN14677579-92
8GCA_001895185.1Lacticaseibacillus paracasei-SAMD00029052-116
9GCA_044990665.1Lacticaseibacillus paracaseiFNCPS K7SAMN44657157-170
10GCA_046939035.1Lacticaseibacillus paracasei subsp. paracaseiM587ASAMN35847929wild boar222
11GCA_029625355.1Lacticaseibacillus paracaseiVHProbi OF10SAMN26144441-252
12GCA_007637635.1Lacticaseibacillus paracaseiNJSAMN12319598-253
13GCA_015319235.1Lacticaseibacillus paracasei subsp. toleransMGB0543SAMN16657553-263
14GCA_008329845.1Lacticaseibacillus paracasei10266SAMN09874024Homo sapiens272
15GCA_009931715.1Lacticaseibacillus paracaseiCACC 566SAMN13871807Canine294
16GCA_024637915.1Lacticaseibacillus paracaseiVHProbi F11SAMN27160580Homo sapiens294
17GCA_028322945.1Lacticaseibacillus paracasei1001295st1_G5_1001295H_181012SAMN31322639Homo sapiens294
18GCA_037283365.1Lacticaseibacillus paracaseiNRC_P5SAMN32629232buffalo294
19GCA_037283435.1Lacticaseibacillus paracaseiNRC_P6SAMN32629233buffalo294
20GCA_037283545.1Lacticaseibacillus paracaseiNRC_P3SAMN32629230cow294
21GCA_012955485.1Lacticaseibacillus paracasei347-16SAMN13259076Homo sapiens295
22GCA_029906365.1Lacticaseibacillus paracasei subsp. paracaseiMI3SAMN34106059Homo sapiens295
23GCA_002904305.1Lacticaseibacillus paracaseiCCC B1205SAMN03813856-300
24GCA_025757505.1Lacticaseibacillus paracaseiNG-LCU-ST2SAMN31037893Maize300
25GCA_001244395.1Lacticaseibacillus paracaseiL9SAMN03853751Homo sapiens301
26GCA_026013725.1Lacticaseibacillus paracaseiATG-E1SAMN31433209Hono sapiens302
27GCA_000410455.1Lacticaseibacillus paracasei subsp. paracasei Lpp43Lpp43SAMN02469725-311
28GCA_016890245.1Lacticaseibacillus paracaseiYT170SAMN17818118Rex rabbit312
29GCA_017638905.1Lacticaseibacillus paracaseiHL182SAMN18236778Homo sapiens314
30GCA_019990865.1Lacticaseibacillus paracaseicek-R2SAMN21367938beet317
31GCA_030480425.1Lacticaseibacillus paracaseiL14SAMN33263285-319
32GCA_028878105.1Lacticaseibacillus paracaseiTMW 1.300SAMN23708206-321
33GCA_015476175.1Lacticaseibacillus paracasei subsp. toleransMGB0747SAMN16668663-323
34GCA_015476195.1Lacticaseibacillus paracasei subsp. toleransMGB0761SAMN16668817-323
35GCA_036430865.1Lacticaseibacillus paracaseiFI11579SAMN33193087-329
36GCA_004078565.1Lacticaseibacillus paracaseiSRCM103424SAMN10743383-333
37GCA_042015765.1Lacticaseibacillus paracaseiZJUZ2-3SAMN43503360Homo sapiens357
38GCA_013307125.1Lacticaseibacillus paracaseiLp02SAMN11489091Homo sapiens358
39GCA_003966835.1Lacticaseibacillus paracasei-SAMD00094822-361
40GCA_036431975.1Lacticaseibacillus paracaseiCMAN-SucSAMN35624267-362
41GCA_036432035.1Lacticaseibacillus paracaseiLMAN-KhSAMN35624263-388
42GCA_003640765.1Lacticaseibacillus paracaseiUBLPC-35SAMN10147909-391
43GCA_032229185.1Lacticaseibacillus paracaseiNC4SAMN37472141-391
44GCA_002079285.1Lacticaseibacillus paracaseiIIASAMN04571918-393
45GCA_008369945.1Lacticaseibacillus paracaseiDTA93SAMN12661681Homo sapiens408
46GCA_025252385.1Lacticaseibacillus paracaseiVHProbi O44SAMN30550144Homo sapiens409
47GCA_025215665.1Lacticaseibacillus paracaseiALAC-4SAMN10688387-411
48GCA_025190665.1Lacticaseibacillus paracaseiCIRM-BIA 655SAMN10365443-416
49GCA_000309665.1Lacticaseibacillus paracaseiM36SAMN02472000-444
50GCA_022614605.1Lacticaseibacillus paracaseiGMNL-653SAMN22548460Homo sapiens448
51GCA_000410435.1Lacticaseibacillus paracasei subsp. paracasei CNCM I-4649CNCM I-4649SAMN02469704-459
52GCA_025190565.1Lacticaseibacillus paracaseiCIRM-BIA 2128SAMN10365446-465
53GCA_037414215.1Lacticaseibacillus paracaseiLPC100SAMN39212581Homo sapiens465
54GCA_025190525.1Lacticaseibacillus paracaseiCIRM-BIA 1517SAMN10365450-467
55GCA_003712965.1Lacticaseibacillus paracaseiFAM6410SAMN04088893-468
56GCA_016887785.1Lacticaseibacillus paracasei2306SAMN17562096-470
57GCA_025190725.1Lacticaseibacillus paracaseiCIRM-BIA 699SAMN10365439-470
58GCA_026797475.1Lacticaseibacillus paracaseiCBP-1042SAMN27675067-470
59GCA_003712565.1Lacticaseibacillus paracaseiFAM19317SAMN04088878-471
60GCA_003712985.1Lacticaseibacillus paracaseiFAM8140SAMN04088895-472
61GCA_028878305.1Lacticaseibacillus paracaseiNRRL B-456SAMN23708197-472
62GCA_037283385.1Lacticaseibacillus paracaseiNRC_P4SAMN32629231cow472
63GCA_015693945.1Lacticaseibacillus paracasei subsp. toleransZY-1SAMN16861159-474
64GCA_002148805.1Lacticaseibacillus paracaseiDPC4206SAMN06220137-476
65GCA_002148885.1Lacticaseibacillus paracaseiDPC4536SAMN06463780-476
66GCA_003434205.1Lacticaseibacillus paracaseiAM33-2ACSAMN09736452Homo sapiens476
67GCA_024498315.1Lacticaseibacillus paracaseiSMN-LBKSAMN29933592-476
68GCA_024622515.1Lacticaseibacillus paracaseiDSM 28675SAMN29593134Mus musculus476
69GCA_028320385.1Lacticaseibacillus paracasei1001270st1_F8_1001270H_150608SAMN31322638Homo sapiens476
70GCA_035586595.1Lacticaseibacillus paracaseiHP-B1337SAMN38922877-476
71GCA_036281375.1Lacticaseibacillus paracaseiCUL07ASAMN09708453-476
72GCA_040785095.1Lacticaseibacillus paracaseigbc_fSAMN41082101-476
73GCA_041283745.2Lacticaseibacillus paracaseiORD 0998SAMN43000418Homo sapiens476
74GCA_045808845.1Lacticaseibacillus paracaseiMSR2SAMN45146297-476
75GCA_048282615.1Lacticaseibacillus paracasei439SAMN46889214-476
76GCA_049191845.1Lacticaseibacillus paracaseiIATA110SAMN45053973Homo sapiens476
77GCA_049205075.1Lacticaseibacillus paracaseiIATA109SAMN45053972Homo sapiens476
78GCA_000309785.1Lacticaseibacillus paracaseiLpc-37SAMN02472013-477
79GCA_016757695.1Lacticaseibacillus paracasei subsp. toleransS-NBSAMN17359333-477
80GCA_016757675.1Lacticaseibacillus paracasei subsp. toleransS-NA5SAMN17359331-478
81GCA_030710015.1Lacticaseibacillus paracaseiULE721SAMN33593465-478
82GCA_026967245.1Lacticaseibacillus paracaseiLpc_yogurt_B6SAMN32062179-482
83GCA_041679805.1Lacticaseibacillus paracaseiAPYSAMN41163063Homo sapiens482
84GCA_026967195.1Lacticaseibacillus paracaseiLpc_yogurt_B5SAMN32062178-483
85GCA_026967205.1Lacticaseibacillus paracaseiLpc_yogurt_B4SAMN32062177-483
86GCA_026967275.1Lacticaseibacillus paracaseiLpc_yogurt_B3SAMN32062176-483
87GCA_026967295.1Lacticaseibacillus paracaseiLpc_yogurt_B2SAMN32062175-483
88GCA_009996805.1Lacticaseibacillus paracaseiD3-5SAMN13905290Homo sapiens484
89GCA_034044075.1Lacticaseibacillus paracaseiMP11ASAMN37950489-485
90GCA_041117985.1Lacticaseibacillus paracaseiMYA5SAMN42930119-485
91GCA_000410235.1Lacticaseibacillus paracasei subsp. paracasei Lpp74Lpp74SAMN02469728-490
92GCA_000410195.1Lacticaseibacillus paracasei subsp. paracasei Lpp219Lpp219SAMN02469710Homo sapiens491
93GCA_049201625.1Lacticaseibacillus paracaseiUBLPc-87SAMN47217620-491
94GCA_004141835.1Lacticaseibacillus paracaseiSRCM103299SAMN10849469-492
95GCA_034555155.1Lacticaseibacillus paracaseiRT4SAMN38857191Brachionus plicatilis538
96GCA_000410055.1Lacticaseibacillus paracasei subsp. paracasei Lpp227Lpp227SAMN02641494Homo sapiens539
97GCA_000410095.1Lacticaseibacillus paracasei subsp. paracasei CNCM I-2877CNCM I-2877SAMN02641492-542
98GCA_009823605.1Lacticaseibacillus paracaseiDTA72SAMN13679055Homo sapiens545
99GCA_003712245.1Lacticaseibacillus paracaseiFAM18108SAMN04088862-547
100GCA_000409975.1Lacticaseibacillus paracasei subsp. paracasei Lpp123Lpp123SAMN02469719-564