Search results for phylogenetically related strains

 

Rank Compare Genome ID Species Strain BioSample ID Host Allelic distance ARGs VFs PGs PPRS
1GCA_014131735.1Lactiplantibacillus plantarumDSM 20174SAMN11357169pickled cabbage0
2GCA_001434175.1Lactiplantibacillus plantarum subsp. plantarum ATCC 14917 = JCM 1149 = CGMCC 1.2437CGMCC 1.2437SAMN02369435-1
3GCA_001633645.1Lactiplantibacillus plantarumNizo2855SAMN04528876-1
4GCA_002750675.1Lactiplantibacillus plantarumRI-203SAMN05717751-1
5GCA_007989145.1Lactiplantibacillus plantarum subsp. plantarum-SAMD00166242-1
6GCA_000143745.1Lactiplantibacillus plantarum subsp. plantarum ATCC 14917 = JCM 1149 = CGMCC 1.2437ATCC 14917SAMN00001478Homo sapiens2
7GCA_001308305.1Lactiplantibacillus plantarumNizo2877SAMN04123802-2
8GCA_003428355.1Lactiplantibacillus plantarumIDCC3501SAMN09858434-2
9GCA_019655875.1Lactiplantibacillus plantarum subsp. plantarum-SAMD00324205-2
10GCA_025190105.1Lactiplantibacillus plantarumCIRM-BIA 2109SAMN10365473-2
11GCA_025189985.1Lactiplantibacillus plantarumCIRM-BIA 466SAMN10365482-3
12GCA_002737935.1Lactiplantibacillus plantarumDietG20.1.2SAMN07834139-17
13GCA_002738055.1Lactiplantibacillus plantarumFlyG3.1.8SAMN07834046Drosophila melanogaster19
14GCA_002737825.1Lactiplantibacillus plantarumFlyG9.1.4SAMN07834051Drosophila melanogaster21
15GCA_002737995.1Lactiplantibacillus plantarumDietG20.2.2_EESAMN07834417-21
16GCA_002737885.1Lactiplantibacillus plantarumFlyG20.2.6SAMN07834128Drosophila melanogaster24
17GCA_002735815.1Lactiplantibacillus plantarumFlyG2.1.8SAMN07829376-27
18GCA_002737845.1Lactiplantibacillus plantarumFlyG20.1.4SAMN07834056Drosophila melanogaster32
19GCA_002737905.1Lactiplantibacillus plantarumFlyG11.2.6SAMN07834125Drosophila melanogaster34
20GCA_002737745.1Lactiplantibacillus plantarumFlyG8.1.1SAMN07834049Drosophila melanogaster43
21GCA_002737835.1Lactiplantibacillus plantarumFlyG10.1.5SAMN07834052Drosophila melanogaster48
22GCA_002737925.1Lactiplantibacillus plantarumFlyG9.2.5SAMN07834089Drosophila melanogaster52
23GCA_002737775.1Lactiplantibacillus plantarumFlyG8.1.2SAMN07834050Drosophila melanogaster54
24GCA_002738045.1Lactiplantibacillus plantarumFlyG10.1.9SAMN07834053Drosophila melanogaster56
25GCA_002737965.1Lactiplantibacillus plantarumFlyG11.1.6SAMN07834055Drosophila melanogaster60
26GCA_002738065.1Lactiplantibacillus plantarumFlyG7.1.6SAMN07834047Drosophila melanogaster70
27GCA_002737975.1Lactiplantibacillus plantarumFlyG11.1.2SAMN07834054Drosophila melanogaster75
28GCA_030061915.1Lactiplantibacillus plantarumLPgojiSAMN25008727-83
29GCA_900452585.1Lactiplantibacillus plantarum subsp. plantarumNCTC13644SAMEA104016171environmental94
30GCA_025122595.1Lactiplantibacillus plantarum1525SAMN10365120-114
31GCA_001633675.1Lactiplantibacillus plantarumNizo2889SAMN04528877-133
32GCA_009720585.1Lactiplantibacillus plantarumKCCP11226SAMN13255693-142
33GCA_003346175.1Lactiplantibacillus plantarumKMB_597SAMN09398937-145
34GCA_038024955.1Lactiplantibacillus plantarumLP140SAMN39639084-146
35GCA_001643065.1Lactiplantibacillus plantarumUC8491SAMN04485286-147
36GCA_037094665.1Lactiplantibacillus plantarumLrld-22SAMN40188378-147
37GCA_009937825.1Lactiplantibacillus plantarumSRCM101511SAMN08707604-151
38GCA_011009755.1Lactiplantibacillus plantarumP5SAMN10822528Meles meles151
39GCA_025133155.1Lactiplantibacillus plantarum1527SAMN10365122-151
40GCA_025189925.1Lactiplantibacillus plantarumCIRM-BIA 2114SAMN10365486-151
41GCA_002117305.1Lactiplantibacillus plantarumTMW 1.1623SAMN05805047-153
42GCA_030263185.2Lactiplantibacillus plantarumILSF15SAMN18440976Homo sapiens153
43GCA_029854315.1Lactiplantibacillus plantarumWLPL01SAMN34160146-154
44GCA_001331925.2Lactiplantibacillus plantarumWLPL04SAMN04092618Homo sapiens155
45GCA_001633605.1Lactiplantibacillus plantarumNizo2806SAMN04528828-155
46GCA_023370155.1Lactiplantibacillus plantarumJB-1SAMN28097544-155
47GCA_025189945.1Lactiplantibacillus plantarumCIRM-BIA 465SAMN10365484-155
48GCA_031596315.1Lactiplantibacillus plantarumVHProbi SYSAMN37345008-155
49GCA_029849115.1Lactiplantibacillus plantarum33CSAMN33849716-157
50GCA_029906245.1Lactiplantibacillus plantarumELAB66SAMN34167589-157
51GCA_030403475.1Lactiplantibacillus plantarumELAB 48CSAMN35983174-157
52GCA_030504705.1Lactiplantibacillus plantarum40CSAMN36405041-157
53GCA_030403425.1Lactiplantibacillus plantarumELAB 66WSAMN35984459-158
54GCA_029764995.1Lactiplantibacillus plantarumELAB25SAMN33850044-159
55GCA_048541615.1Lactiplantibacillus plantarumZG308SAMN47195325-163
56GCA_003952885.1Lactiplantibacillus plantarum subsp. plantarumnF1-FDSAMN08158233-172
57GCA_035966695.1Lactiplantibacillus plantarumSCO1SAMN39452779cow173
58GCA_029910155.1Lactiplantibacillus plantarumGK502SAMN30034962-176
59GCA_049525375.1Lactiplantibacillus plantarumHS1-L1SAMN43140290-177
60GCA_004337615.1Lactiplantibacillus plantarumEMSAMN11053536-179
61GCA_049190885.1Lactiplantibacillus plantarumLPJBC5SAMN47384276-189
62GCA_000830535.1Lactiplantibacillus plantarum90skSAMN03272560Homo sapiens191
63GCA_001540925.1Lactiplantibacillus plantarumLp1610SAMN03702584bovine199
64GCA_024969905.1Lactiplantibacillus plantarumSRCM210465SAMN30551690Sus scrofa domesticus203
65GCA_028322885.1Lactiplantibacillus plantarum1001287st1_A4_1001287B_170213SAMN31322646Homo sapiens204
66GCA_014840995.1Lactiplantibacillus plantarumPMO08SAMN16261143-205
67GCA_024800605.1Lactiplantibacillus plantarumSRCM210459SAMN30472540Sus scrofa domesticus205
68GCA_026013765.1Lactiplantibacillus plantarumE2SAMN31455228Larimichthys crocea206
69GCA_046244405.1Lactiplantibacillus plantarumLP8SAMN45628971-206
70GCA_013377705.1Lactiplantibacillus plantarumZN-3SAMN15338494chicken208
71GCA_019641415.1Lactiplantibacillus plantarumLB244RSAMN20676127-213
72GCA_027558615.1Lactiplantibacillus plantarumVHProbi E15SAMN27162619Homo sapiens213
73GCA_024758745.1Lactiplantibacillus plantarumVHProbi O10SAMN28104611Homo sapiens214
74GCA_001633415.1Lactiplantibacillus plantarumNizo2741SAMN04528807-284
75GCA_017742875.1Lactiplantibacillus plantarumLRCC5314SAMN18452343-291
76GCA_029542245.1Lactiplantibacillus plantarumEN6SAMN32424931alfalfa291
77GCA_001596095.1Lactiplantibacillus plantarumJBE245SAMN04517536-292
78GCA_023168025.1Lactiplantibacillus plantarum-SAMD00290014-292
79GCA_002234395.1Lactiplantibacillus plantarum8 PA 3SAMN07312274Homo sapiens295
80GCA_036353265.1Lactiplantibacillus plantarumF53SAMN38726256-295
81GCA_001010175.1Lactiplantibacillus plantarum8 RA-3SAMN03452286-296
82GCA_004403045.2Lactiplantibacillus plantarum8p-a3SAMN11180819-296
83GCA_009762745.1Lactiplantibacillus plantarum8P-A3SAMN13520994-297
84GCA_023973045.1Lactiplantibacillus plantarumZ.6-1SAMN29205640-297
85GCA_004404125.1Lactiplantibacillus plantarum8p-a3-ClrSAMN11180791-298
86GCA_044990725.1Lactiplantibacillus plantarumFNCPS 37SAMN44657154-299
87GCA_004354995.1Lactiplantibacillus plantarumATCC 202195SAMN11106966Homo sapiens300
88GCA_010586945.1Lactiplantibacillus plantarum202195SAMN11618740-300
89GCA_018351295.1Lactiplantibacillus plantarumATCC 202195SAMN14169821Homo sapiens300
90GCA_049525355.1Lactiplantibacillus plantarumHS1-L2SAMN43140291-301
91GCA_019311725.2Lactiplantibacillus plantarum8p-a3-Clr-AmxSAMN20132781-302
92GCA_030464525.1Lactiplantibacillus plantarumFCQNA27M4SAMN12027233Homo sapiens302
93GCA_023145715.1Lactiplantibacillus plantarumFCa3LSAMN23714032-306
94GCA_013155145.1Lactiplantibacillus plantarumCNEI-KCA4SAMN14941080Plant313
95GCA_030297735.1Lactiplantibacillus plantarumAWA2045SAMD00599671-317
96GCA_025189845.1Lactiplantibacillus plantarumCIRM-BIA 2115SAMN10365490-322
97GCA_025190165.1Lactiplantibacillus plantarumCIRM-BIA 2180SAMN10365470-322
98GCA_013694305.1Lactiplantibacillus plantarumCNEI-KCA5SAMN15511455-323
99GCA_028768485.1Lactiplantibacillus plantarumSMB758SAMN33235474-323
100GCA_033546835.1Lactiplantibacillus plantarumbeLP1SAMN37988430-323