Search results for phylogenetically related strains

 

Rank Compare Genome ID Species Strain BioSample ID Host Allelic distance ARGs VFs PGs PPRS
1GCA_014830195.1Limosilactobacillus fermentumHPLDSAMN09580242Homo sapiens0
2GCA_021278125.1Limosilactobacillus fermentumLAB1SAMN23636590-73
3GCA_008802915.1Limosilactobacillus fermentum2760SAMN12786154-174
4GCA_000466785.3Limosilactobacillus fermentum 38723872SAMN02314197Homo sapiens285
5GCA_002869825.2Limosilactobacillus fermentumLfU21SAMN08290293Homo sapiens305
6GCA_025211175.1Limosilactobacillus fermentum447SAMN10365681-307
7GCA_003346325.1Limosilactobacillus fermentumKMB_612SAMN09398944-311
8GCA_040347825.1Limosilactobacillus fermentumICIS24SAMN40732633-317
9GCA_040347895.1Limosilactobacillus fermentumICIS23SAMN40732997-317
10GCA_039566885.1Limosilactobacillus fermentumU19SAMN41162772-319
11GCA_039566235.1Limosilactobacillus fermentumU14SAMN41162770-320
12GCA_039566785.1Limosilactobacillus fermentumU13SAMN41162769-320
13GCA_005864145.1Limosilactobacillus fermentumFAM 19471SAMN11653939-328
14GCA_002072085.1Limosilactobacillus fermentumVRI-003SAMN06546707-329
15GCA_017068315.1Limosilactobacillus fermentumGR1103SAMN17976243-329
16GCA_024665195.1Limosilactobacillus fermentumPCCSAMN29862209Homo sapiens329
17GCA_017134335.1Limosilactobacillus fermentumGR1009SAMN17976238-330
18GCA_017134355.1Limosilactobacillus fermentumGR1008SAMN17976237-330
19GCA_017134375.1Limosilactobacillus fermentumGR1007SAMN17976236-331
20GCA_019890875.1Limosilactobacillus fermentumACA-DC 179SAMN21157785-332
21GCA_008868475.1Limosilactobacillus fermentumBIO6529SAMN12856542Homo sapiens338
22GCA_022509455.1Limosilactobacillus fermentumQAULFN54SAMN20114171-338
23GCA_037966785.1Limosilactobacillus fermentumATA-LTC-Lf170503SAMN40643418-338
24GCA_040785075.1Limosilactobacillus fermentumgbc_hSAMN41082103-338
25GCA_045809205.1Limosilactobacillus fermentumSN-1SAMN45099581-343
26GCA_025191505.1Limosilactobacillus fermentumCIRM-BIA 866SAMN10365400-347
27GCA_045527665.1Limosilactobacillus fermentumFAM 25338SAMN43257780-347
28GCA_045527705.1Limosilactobacillus fermentumFAM 25337SAMN43257779-347
29GCA_025191625.1Limosilactobacillus fermentumCIRM-BIA 2157SAMN10365394-351
30GCA_029872335.1Limosilactobacillus fermentumR17-5SAMN34247966-351
31GCA_039566575.1Limosilactobacillus fermentumA190SAMN41162754-356
32GCA_025122475.1Limosilactobacillus fermentumCIRM-BIA 2221SAMN10365213-368
33GCA_030971365.1Limosilactobacillus fermentumDRD-73SAMN37057109-379
34GCA_025191805.1Limosilactobacillus fermentumCIRM-BIA 891SAMN10365385-380
35GCA_029011825.1Limosilactobacillus fermentumVSI05SAMN33275432Homo sapiens383
36GCA_002794315.1Limosilactobacillus fermentum311SAMN08014154Homo sapiens387
37GCA_014488995.1Limosilactobacillus fermentum CECT 5716CECT 5716SAMN15816309Homo sapiens398
38GCA_020520555.1Limosilactobacillus fermentumCECT5716SAMN09703412Homo sapiens398
39GCA_022509445.1Limosilactobacillus fermentumQAULFN53SAMN20114170-398
40GCA_028463945.1Limosilactobacillus fermentumMWLf-4SAMN32317227Homo sapiens398
41GCA_037407275.1Limosilactobacillus fermentumMCC 0225SAMN40371654-398
42GCA_030971345.1Limosilactobacillus fermentumDRD-84SAMN37057110-400
43GCA_025191635.1Limosilactobacillus fermentumCIRM-BIA 2154SAMN10365392-405
44GCA_018398375.1Limosilactobacillus fermentumATCC 23271SAMN19117288Homo sapiens406
45GCA_002863265.1Limosilactobacillus fermentumUMB0187SAMN08193695Homo sapiens409
46GCA_046064525.1Limosilactobacillus fermentumJ23SAMN27625922-410
47GCA_002899655.1Limosilactobacillus fermentumCRL1446SAMN08355059-416
48GCA_900290185.1Limosilactobacillus fermentumCECT 9269SAMEA104569778-416
49GCA_003261135.1Limosilactobacillus fermentumLF2SAMN09435684-421
50GCA_000210515.1Limosilactobacillus fermentum CECT 5716CECT 5716SAMN02604100-422
51GCA_025122575.1Limosilactobacillus fermentumCIRM-BIA 2220SAMN10365214-431
52GCA_032598845.1Limosilactobacillus fermentumPC10SAMN31826480Poultry432
53GCA_005341425.1Limosilactobacillus fermentumB1 28SAMN09475314-436
54GCA_013394085.1Limosilactobacillus fermentumDSM 20052SAMN11893902-436
55GCA_016617695.1Limosilactobacillus fermentumB44SAMN17214540-436
56GCA_028462585.1Limosilactobacillus fermentum92281_i2SAMN32886984-436
57GCA_029823225.1Limosilactobacillus fermentumLMG 6902SAMN33225764-436
58GCA_030770375.1Limosilactobacillus fermentumB-1840SAMN36918642Homo sapiens436
59GCA_000159215.1Limosilactobacillus fermentum ATCC 14931ATCC 14931SAMN00001473Homo sapiens437
60GCA_022509425.1Limosilactobacillus fermentumQAULFN21SAMN20114169-437
61GCA_001039735.1Limosilactobacillus fermentum L930BBL930BBSAMEA3158477-440
62GCA_003346315.1Limosilactobacillus fermentumKMB_613SAMN09398945-441
63GCA_030845215.1Limosilactobacillus fermentumA51SAMN36813915-441
64GCA_012273035.1Limosilactobacillus fermentumHFD1SAMN14470504Homo sapiens445
65GCA_026930525.1Limosilactobacillus fermentumMC1SAMN22155537Homo sapiens448
66GCA_018884205.1Limosilactobacillus fermentumYLF016SAMN16987128Yak450
67GCA_025191645.1Limosilactobacillus fermentumCIRM-BIA 2155SAMN10365391-458
68GCA_025191825.1Limosilactobacillus fermentumCIRM-BIA 1951SAMN10365384-460
69GCA_001297025.1Limosilactobacillus fermentumHFB3SAMN04038470Homo sapiens463
70GCA_003710225.1Limosilactobacillus fermentumDR9SAMN09701875Cow463
71GCA_025191605.1Limosilactobacillus fermentumCIRM-BIA 872SAMN10365395-463
72GCA_004063515.1Limosilactobacillus fermentumSRCM103285SAMN10737529-471
73GCA_025191725.1Limosilactobacillus fermentumCIRM-BIA 2156SAMN10365387-471
74GCA_006538825.1Limosilactobacillus fermentum-SAMD00093696-472
75GCA_024137685.1Limosilactobacillus fermentumURCS 11SAMN28052912Homo sapiens472
76GCA_025191565.1Limosilactobacillus fermentumCIRM-BIA 2152SAMN10365397-472
77GCA_025191705.1Limosilactobacillus fermentumCIRM-BIA 697SAMN10365390-472
78GCA_025191755.1Limosilactobacillus fermentumCIRM-BIA 2235SAMN10365389-472
79GCA_000010145.1Limosilactobacillus fermentum IFO 3956-SAMD00060917-473
80GCA_000966835.2Limosilactobacillus fermentumLfQi6SAMN03372370Homo sapiens473
81GCA_024637935.1Limosilactobacillus fermentumVHProbi O48SAMN27397806Homo sapiens473
82GCA_003346795.1Limosilactobacillus fermentumLDTM 7301SAMN05712721-474
83GCA_025191745.1Limosilactobacillus fermentumCIRM-BIA 894SAMN10365388-474
84GCA_025191785.1Limosilactobacillus fermentumCIRM-BIA 893SAMN10365386-474
85GCA_000397165.1Limosilactobacillus fermentum F-6F-6SAMN02603935-475
86GCA_011032765.1Limosilactobacillus fermentumAGR1485SAMN13241836Homo sapiens475
87GCA_024494505.1Limosilactobacillus fermentumPMC101SAMN29861940Homo sapiens475
88GCA_003255875.1Limosilactobacillus fermentumCBA7106SAMN07224244Homo sapiens476
89GCA_000162395.1Limosilactobacillus fermentum 28-3-CHN28-3-CHNSAMN02463745Homo sapiens477
90GCA_024204625.1Limosilactobacillus fermentumDM075SAMN29360653Homo sapiens477
91GCA_026184215.1Limosilactobacillus fermentumBRD_L14SAMN31580341Canis lupus familiaris mixed breed477
92GCA_001854105.1Limosilactobacillus fermentum47-7SAMN05893390Homo sapiens478
93GCA_002794375.1Limosilactobacillus fermentum103SAMN07985466Homo sapiens478
94GCA_016861505.1Limosilactobacillus fermentum-SAMD00270998-478
95GCA_031460995.1Limosilactobacillus fermentumKCKM 0998SAMN37256217-478
96GCA_001941785.1Limosilactobacillus fermentumSNUV175SAMN06174220Homo sapiens480
97GCA_003462755.1Limosilactobacillus fermentumAF16-22LBSAMN09734308Homo sapiens480
98GCA_021582915.1Limosilactobacillus fermentumAGA52SAMN25042641-480
99GCA_029537335.1Limosilactobacillus fermentumCYLB55SAMN33777524-480
100GCA_043950145.1Limosilactobacillus fermentumz-6SAMN44355615pumpkin481