Search results for phylogenetically related strains

 

Rank Compare Genome ID Species Strain BioSample ID Host Allelic distance ARGs VFs PGs PPRS
1GCA_017638905.1Lacticaseibacillus paracaseiHL182SAMN18236778Homo sapiens0
2GCA_015476175.1Lacticaseibacillus paracasei subsp. toleransMGB0747SAMN16668663-95
3GCA_015476195.1Lacticaseibacillus paracasei subsp. toleransMGB0761SAMN16668817-97
4GCA_002904305.1Lacticaseibacillus paracaseiCCC B1205SAMN03813856-104
5GCA_028878105.1Lacticaseibacillus paracaseiTMW 1.300SAMN23708206-105
6GCA_001244395.1Lacticaseibacillus paracaseiL9SAMN03853751Homo sapiens107
7GCA_030480425.1Lacticaseibacillus paracaseiL14SAMN33263285-124
8GCA_029906365.1Lacticaseibacillus paracasei subsp. paracaseiMI3SAMN34106059Homo sapiens128
9GCA_009931715.1Lacticaseibacillus paracaseiCACC 566SAMN13871807Canine129
10GCA_028322945.1Lacticaseibacillus paracasei1001295st1_G5_1001295H_181012SAMN31322639Homo sapiens129
11GCA_024637915.1Lacticaseibacillus paracaseiVHProbi F11SAMN27160580Homo sapiens130
12GCA_037283365.1Lacticaseibacillus paracaseiNRC_P5SAMN32629232buffalo130
13GCA_037283435.1Lacticaseibacillus paracaseiNRC_P6SAMN32629233buffalo130
14GCA_037283545.1Lacticaseibacillus paracaseiNRC_P3SAMN32629230cow130
15GCA_012955485.1Lacticaseibacillus paracasei347-16SAMN13259076Homo sapiens131
16GCA_026013725.1Lacticaseibacillus paracaseiATG-E1SAMN31433209Hono sapiens134
17GCA_025757505.1Lacticaseibacillus paracaseiNG-LCU-ST2SAMN31037893Maize146
18GCA_000410455.1Lacticaseibacillus paracasei subsp. paracasei Lpp43Lpp43SAMN02469725-151
19GCA_016890245.1Lacticaseibacillus paracaseiYT170SAMN17818118Rex rabbit158
20GCA_013307125.1Lacticaseibacillus paracaseiLp02SAMN11489091Homo sapiens162
21GCA_029625355.1Lacticaseibacillus paracaseiVHProbi OF10SAMN26144441-172
22GCA_007637635.1Lacticaseibacillus paracaseiNJSAMN12319598-173
23GCA_036430865.1Lacticaseibacillus paracaseiFI11579SAMN33193087-176
24GCA_042015765.1Lacticaseibacillus paracaseiZJUZ2-3SAMN43503360Homo sapiens193
25GCA_003966835.1Lacticaseibacillus paracasei-SAMD00094822-199
26GCA_003640765.1Lacticaseibacillus paracaseiUBLPC-35SAMN10147909-214
27GCA_036431975.1Lacticaseibacillus paracaseiCMAN-SucSAMN35624267-228
28GCA_046939035.1Lacticaseibacillus paracasei subsp. paracaseiM587ASAMN35847929wild boar247
29GCA_008369945.1Lacticaseibacillus paracaseiDTA93SAMN12661681Homo sapiens252
30GCA_008329845.1Lacticaseibacillus paracasei10266SAMN09874024Homo sapiens264
31GCA_036432035.1Lacticaseibacillus paracaseiLMAN-KhSAMN35624263-265
32GCA_032229185.1Lacticaseibacillus paracaseiNC4SAMN37472141-270
33GCA_019990865.1Lacticaseibacillus paracaseicek-R2SAMN21367938beet288
34GCA_002079285.1Lacticaseibacillus paracaseiIIASAMN04571918-289
35GCA_025252385.1Lacticaseibacillus paracaseiVHProbi O44SAMN30550144Homo sapiens292
36GCA_025215665.1Lacticaseibacillus paracaseiALAC-4SAMN10688387-305
37GCA_028609725.1Lacticaseibacillus paracaseiCLP-C10SAMN14677579-306
38GCA_000309665.1Lacticaseibacillus paracaseiM36SAMN02472000-309
39GCA_025190665.1Lacticaseibacillus paracaseiCIRM-BIA 655SAMN10365443-309
40GCA_003712785.1Lacticaseibacillus paracaseiFAM6161SAMN04088891-311
41GCA_003713005.1Lacticaseibacillus paracaseiFAM7821SAMN04088894-313
42GCA_012932835.1Lacticaseibacillus paracaseiCRF28SAMN05660651-314
43GCA_000410435.1Lacticaseibacillus paracasei subsp. paracasei CNCM I-4649CNCM I-4649SAMN02469704-319
44GCA_015693945.1Lacticaseibacillus paracasei subsp. toleransZY-1SAMN16861159-319
45GCA_030361365.1Lacticaseibacillus paracaseiTOM.9SAMN35776875-319
46GCA_026797475.1Lacticaseibacillus paracaseiCBP-1042SAMN27675067-321
47GCA_025190725.1Lacticaseibacillus paracaseiCIRM-BIA 699SAMN10365439-322
48GCA_028878305.1Lacticaseibacillus paracaseiNRRL B-456SAMN23708197-322
49GCA_037283385.1Lacticaseibacillus paracaseiNRC_P4SAMN32629231cow323
50GCA_001895185.1Lacticaseibacillus paracasei-SAMD00029052-325
51GCA_016887785.1Lacticaseibacillus paracasei2306SAMN17562096-326
52GCA_003712565.1Lacticaseibacillus paracaseiFAM19317SAMN04088878-327
53GCA_003712985.1Lacticaseibacillus paracaseiFAM8140SAMN04088895-327
54GCA_002148805.1Lacticaseibacillus paracaseiDPC4206SAMN06220137-328
55GCA_002148885.1Lacticaseibacillus paracaseiDPC4536SAMN06463780-328
56GCA_024498315.1Lacticaseibacillus paracaseiSMN-LBKSAMN29933592-328
57GCA_024622515.1Lacticaseibacillus paracaseiDSM 28675SAMN29593134Mus musculus328
58GCA_028320385.1Lacticaseibacillus paracasei1001270st1_F8_1001270H_150608SAMN31322638Homo sapiens328
59GCA_035586595.1Lacticaseibacillus paracaseiHP-B1337SAMN38922877-328
60GCA_036281375.1Lacticaseibacillus paracaseiCUL07ASAMN09708453-328
61GCA_040785095.1Lacticaseibacillus paracaseigbc_fSAMN41082101-328
62GCA_041283745.2Lacticaseibacillus paracaseiORD 0998SAMN43000418Homo sapiens328
63GCA_045808845.1Lacticaseibacillus paracaseiMSR2SAMN45146297-328
64GCA_048282615.1Lacticaseibacillus paracasei439SAMN46889214-328
65GCA_049191845.1Lacticaseibacillus paracaseiIATA110SAMN45053973Homo sapiens328
66GCA_049205075.1Lacticaseibacillus paracaseiIATA109SAMN45053972Homo sapiens328
67GCA_003434205.1Lacticaseibacillus paracaseiAM33-2ACSAMN09736452Homo sapiens329
68GCA_000309785.1Lacticaseibacillus paracaseiLpc-37SAMN02472013-330
69GCA_016757675.1Lacticaseibacillus paracasei subsp. toleransS-NA5SAMN17359331-330
70GCA_016757695.1Lacticaseibacillus paracasei subsp. toleransS-NBSAMN17359333-330
71GCA_000309645.1Lacticaseibacillus paracaseiCRF28SAMN02472005Homo sapiens331
72GCA_004141835.1Lacticaseibacillus paracaseiSRCM103299SAMN10849469-332
73GCA_025190565.1Lacticaseibacillus paracaseiCIRM-BIA 2128SAMN10365446-334
74GCA_041117985.1Lacticaseibacillus paracaseiMYA5SAMN42930119-334
75GCA_037414215.1Lacticaseibacillus paracaseiLPC100SAMN39212581Homo sapiens335
76GCA_015319235.1Lacticaseibacillus paracasei subsp. toleransMGB0543SAMN16657553-336
77GCA_012932815.1Lacticaseibacillus paracaseiUW1SAMN05660434-337
78GCA_030710015.1Lacticaseibacillus paracaseiULE721SAMN33593465-337
79GCA_003712965.1Lacticaseibacillus paracaseiFAM6410SAMN04088893-340
80GCA_000410235.1Lacticaseibacillus paracasei subsp. paracasei Lpp74Lpp74SAMN02469728-346
81GCA_000410195.1Lacticaseibacillus paracasei subsp. paracasei Lpp219Lpp219SAMN02469710Homo sapiens353
82GCA_049201625.1Lacticaseibacillus paracaseiUBLPc-87SAMN47217620-354
83GCA_044990665.1Lacticaseibacillus paracaseiFNCPS K7SAMN44657157-358
84GCA_025190525.1Lacticaseibacillus paracaseiCIRM-BIA 1517SAMN10365450-359
85GCA_026967245.1Lacticaseibacillus paracaseiLpc_yogurt_B6SAMN32062179-368
86GCA_041679805.1Lacticaseibacillus paracaseiAPYSAMN41163063Homo sapiens369
87GCA_009996805.1Lacticaseibacillus paracaseiD3-5SAMN13905290Homo sapiens370
88GCA_026967195.1Lacticaseibacillus paracaseiLpc_yogurt_B5SAMN32062178-370
89GCA_026967205.1Lacticaseibacillus paracaseiLpc_yogurt_B4SAMN32062177-370
90GCA_026967275.1Lacticaseibacillus paracaseiLpc_yogurt_B3SAMN32062176-370
91GCA_026967295.1Lacticaseibacillus paracaseiLpc_yogurt_B2SAMN32062175-370
92GCA_003712245.1Lacticaseibacillus paracaseiFAM18108SAMN04088862-396
93GCA_034044075.1Lacticaseibacillus paracaseiMP11ASAMN37950489-396
94GCA_000410055.1Lacticaseibacillus paracasei subsp. paracasei Lpp227Lpp227SAMN02641494Homo sapiens408
95GCA_004078565.1Lacticaseibacillus paracaseiSRCM103424SAMN10743383-412
96GCA_000410015.1Lacticaseibacillus paracasei subsp. paracasei Lpp221Lpp221SAMN02469717Homo sapiens469
97GCA_002257625.1Lacticaseibacillus paracaseiTK1501SAMN05921089-474
98GCA_000410095.1Lacticaseibacillus paracasei subsp. paracasei CNCM I-2877CNCM I-2877SAMN02641492-477
99GCA_000410075.1Lacticaseibacillus paracasei subsp. paracasei CNCM I-4648CNCM I-4648SAMN03177793-482
100GCA_000409975.1Lacticaseibacillus paracasei subsp. paracasei Lpp123Lpp123SAMN02469719-490