Search results for phylogenetically related strains

 

Rank Compare Genome ID Species Strain BioSample ID Host Allelic distance ARGs VFs PGs PPRS
1GCA_018257215.1Lactiplantibacillus plantarumDm-2019-13SAMN17146147Drosophila melanogaster0
2GCA_046353025.1Lactiplantibacillus plantarumLpDm13SAMN40655003Drosophila melanogaster0
3GCA_046352965.1Lactiplantibacillus plantarumLpWF-ShortReadAssemblySAMN40707855fly239
4GCA_046353005.1Lactiplantibacillus plantarumLpR3P51-LongReadAssemblySAMN40655002-239
5GCA_046353035.1Lactiplantibacillus plantarumLpWF-F9aSAMN40655005-239
6GCA_046353045.1Lactiplantibacillus plantarumLpWF-D11SAMN40655006-239
7GCA_046353105.1Lactiplantibacillus plantarumLpWF-LongReadAssemblySAMN40655001Drosophila melanogaster239
8GCA_046352955.1Lactiplantibacillus plantarumLpR3P51-ShortReadAssemblySAMN40707856-240
9GCA_023108905.1Lactiplantibacillus plantarumM4L1SAMN26138624-644
10GCA_017580935.1Lactiplantibacillus plantarumEL11SAMN13735608-652
11GCA_036321505.1Lactiplantibacillus plantarumCGMCC 14177SAMN39555870-652
12GCA_022558425.1Lactiplantibacillus plantarumSTSAMN24424940-653
13GCA_034478365.1Lactiplantibacillus plantarumS034-52w-2SAMN38650131Homo sapiens655
14GCA_044731905.1Lactiplantibacillus plantarumDSM 12028SAMN41278858-656
15GCA_003966855.1Lactiplantibacillus plantarum-SAMD00097254-657
16GCA_034422915.1Lactiplantibacillus plantarumYW2189SAMN38636266Homo sapiens657
17GCA_001639565.1Lactiplantibacillus plantarumNizo2260SAMN04525974Homo sapiens658
18GCA_001651845.1Lactiplantibacillus plantarumNizo1837SAMN04510483Homo sapiens658
19GCA_009889775.1Lactiplantibacillus plantarumLpRasSAMN05645852-658
20GCA_020881935.1Lactiplantibacillus plantarumZW5SAMN22871635-658
21GCA_027854125.1Lactiplantibacillus plantarumHH-LP56SAMN32599285-658
22GCA_029854235.1Lactiplantibacillus plantarumMA2SAMN34153834-658
23GCA_036330065.1Lactiplantibacillus plantarum subsp. plantarumGBCC-GR003SAMN39614441Homo sapiens658
24GCA_039938975.1Lactiplantibacillus plantarumLS 4-4SAMN41451970Homo sapiens658
25GCA_040745055.1Lactiplantibacillus plantarumCMTB-TF1SAMN42358598Tremella fuciformis658
26GCA_041679785.1Lactiplantibacillus plantarumDo4_IMSAMN41163062Homo sapiens658
27GCA_001633575.1Lactiplantibacillus plantarumNizo2814SAMN04528840-659
28GCA_039838505.1Lactiplantibacillus plantarum1001287st2_C3_1001287B_170213SAMN31322647Homo sapiens659
29GCA_001540965.1Lactiplantibacillus plantarumLp1612SAMN03702585bovine660
30GCA_008868495.1Lactiplantibacillus plantarumBIO1096SAMN12856541-660
31GCA_018588615.2Lactiplantibacillus plantarum subsp. plantarumM17SAMN17313503-660
32GCA_018588665.2Lactiplantibacillus plantarum subsp. plantarumM8SAMN17313476-660
33GCA_022810685.1Lactiplantibacillus plantarumSCB0151SAMN22106488Kefir grain660
34GCA_031461015.1Lactiplantibacillus plantarumKCKM 0594SAMN37256206-660
35GCA_037996145.1Lactiplantibacillus plantarumIFSAMN40663693-660
36GCA_001617525.2Lactiplantibacillus plantarumCAUH2SAMN04549363-661
37GCA_004025165.1Lactiplantibacillus plantarumSKT109SAMN10721184-661
38GCA_004123095.1Lactiplantibacillus plantarumXZ3303SAMN10782618-661
39GCA_013458335.1Lactiplantibacillus plantarumHC-2SAMN13555603Chaeturichthys stigmatias661
40GCA_020844665.1Lactiplantibacillus plantarumFUA3428SAMN21235229-661
41GCA_020844685.1Lactiplantibacillus plantarumFUA3302SAMN21227964-661
42GCA_025189965.1Lactiplantibacillus plantarumCIRM-BIA 653SAMN10365483-661
43GCA_026127685.1Lactiplantibacillus plantarumFUA3302SAMN21845655-661
44GCA_026127775.1Lactiplantibacillus plantarumFUA3428SAMN21845660-661
45GCA_030463605.1Lactiplantibacillus plantarumHC-2SAMN30247567fish661
46GCA_030464565.1Lactiplantibacillus plantarumVJLHD12L4SAMN12027231-661
47GCA_032818175.1Lactiplantibacillus plantarumEp-M17SAMN30403673-661
48GCA_041941405.1Lactiplantibacillus plantarumGBW-LP001SAMN43515873-661
49GCA_044590115.1Lactiplantibacillus plantarumNMGL2SAMN44480978Food sample661
50GCA_001436855.1Lactiplantibacillus plantarumDSM 13273SAMN02797770-662
51GCA_039414055.1Lactiplantibacillus plantarumKA9MASAMN41086562-662
52GCA_046736505.1Lactiplantibacillus plantarumCVASU2SAMN44971013Gallus gallus662
53GCA_000148815.2Lactiplantibacillus plantarum ST-IIIST-IIISAMN02603896-663
54GCA_002370985.1Lactiplantibacillus plantarumLp510SAMN05645839-663
55GCA_003344845.1Lactiplantibacillus plantarumCGMCC12436SAMN09699166-663
56GCA_007833595.1Lactiplantibacillus plantarumY44SAMN09487401-663
57GCA_009756965.1Lactiplantibacillus plantarumBK-022SAMN11655668-663
58GCA_009889735.1Lactiplantibacillus plantarumLp835SAMN05645850-663
59GCA_009889825.1Lactiplantibacillus plantarumLp823SAMN05645849-663
60GCA_009889835.1Lactiplantibacillus plantarumLp546SAMN05645846-663
61GCA_009889865.1Lactiplantibacillus plantarumLp821SAMN05645848-663
62GCA_009889885.1Lactiplantibacillus plantarumLp543SAMN05645845-663
63GCA_009889895.1Lactiplantibacillus plantarumLp542SAMN05645844-663
64GCA_009889925.1Lactiplantibacillus plantarumLp533SAMN05645842-663
65GCA_009889935.1Lactiplantibacillus plantarumLp541SAMN05645843-663
66GCA_009889965.1Lactiplantibacillus plantarumLp520SAMN05645841-663
67GCA_009890055.1Lactiplantibacillus plantarumLp305SAMN05645837-663
68GCA_017301935.1Lactiplantibacillus plantarum12SAMN13495976Scophthalmus maximus663
69GCA_023207995.1Lactiplantibacillus plantarumLP-F1SAMN14572866-663
70GCA_025723165.1Lactiplantibacillus plantarumBF_15SAMN23674217-663
71GCA_034333585.1Lactiplantibacillus plantarumcqf-43SAMN37720970sow feces663
72GCA_038039495.1Lactiplantibacillus plantarumplantIISAMN40560998activated sludge663
73GCA_038743365.1Lactiplantibacillus plantarumHOM2217SAMN41038019-663
74GCA_040084715.1Lactiplantibacillus plantarumBGI-N6SAMN41398132Homo sapiens663
75GCA_002024845.1Lactiplantibacillus plantarumCLP0611SAMN06240352-664
76GCA_002914965.1Lactiplantibacillus plantarumBP06SAMN07187784-664
77GCA_003023825.1Lactiplantibacillus plantarumJDARSHSAMN08741665-664
78GCA_003053035.1Lactiplantibacillus plantarumDS18_9SAMN06464105Homo sapiens664
79GCA_003061725.1Lactiplantibacillus plantarumDS6_9SAMN05726897Homo sapiens664
80GCA_003061765.1Lactiplantibacillus plantarumDS14_9SAMN05726895Homo sapiens664
81GCA_003061785.1Lactiplantibacillus plantarumDS9_9SAMN05726899Homo sapiens664
82GCA_003061805.1Lactiplantibacillus plantarumDS11_9SAMN05726893Homo sapiens664
83GCA_003143915.1Lactiplantibacillus plantarumHAC01SAMN09087848-664
84GCA_003586485.1Lactiplantibacillus plantarumDR7SAMN09721150Bos taurus664
85GCA_003597595.1Lactiplantibacillus plantarumATG-K6SAMN10094369-664
86GCA_003597615.1Lactiplantibacillus plantarumATG-K8SAMN10094466-664
87GCA_004055415.1Lactiplantibacillus plantarumSRCM 103305SAMN10738671-664
88GCA_004101625.1Lactiplantibacillus plantarumSRCM103418SAMN10743382-664
89GCA_006364975.1Lactiplantibacillus plantarumNTTN08SAMN11952115Homo sapiens664
90GCA_013256965.1Lactiplantibacillus plantarum subsp. plantarumG1SAMN14979736-664
91GCA_021279005.2Lactiplantibacillus plantarum022AESAMN09662691-664
92GCA_026183415.1Lactiplantibacillus plantarumBRD_L15SAMN31580342Canis lupus familiaris dachshund664
93GCA_026275505.1Lactiplantibacillus plantarumV1SAMN31726903cow664
94GCA_028323145.1Lactiplantibacillus plantarum1001274st1_G7_1001274B_151102SAMN31322645Homo sapiens664
95GCA_039954855.1Lactiplantibacillus plantarumAHQ-14SAMN41274413-664
96GCA_040785175.1Lactiplantibacillus plantarumgbc_dSAMN41082099-664
97GCA_040785225.1Lactiplantibacillus plantarumgbc_CSAMN41082098-664
98GCA_040790905.1Lactiplantibacillus plantarumAUSA004SAMN41916868-664
99GCA_040822595.1Lactiplantibacillus plantarumATA-LPC98052SAMN41784237-664
100GCA_040883545.1Lactiplantibacillus plantarumAM-LP-81SAMN42007028-664