Search results for phylogenetically related strains

 

Rank Compare Genome ID Species Strain BioSample ID Host Allelic distance ARGs VFs PGs PPRS
1GCA_019278105.1Lactobacillus crispatus5.1SAMN18809432Homo sapiens0
2GCA_019278055.1Lactobacillus crispatus8.2SAMN18809434Homo sapiens2
3GCA_019278135.1Lactobacillus crispatus7.2SAMN18809433Homo sapiens2
4GCA_009857395.1Lactobacillus crispatusIndica2SAMN13743077Homo sapiens390
5GCA_002811165.1Lactobacillus crispatusDISK12SAMN05770992Homo sapiens473
6GCA_030214445.1Lactobacillus crispatusUMB8789SAMN34996665Homo sapiens538
7GCA_032376945.1Lactobacillus crispatusUMB5661SAMN37434658Homo sapiens541
8GCA_032376885.1Lactobacillus crispatusUMB6244SAMN37434651Homo sapiens544
9GCA_030213555.1Lactobacillus crispatusUMB9226SAMN34996707Homo sapiens745
10GCA_002861805.1Lactobacillus crispatusUMB0824SAMN08193690Homo sapiens746
11GCA_030212645.1Lactobacillus crispatusUMB9873SAMN34996756Homo sapiens748
12GCA_038001365.1Lactobacillus crispatusLMG 11415SAMN33861695Homo sapiens748
13GCA_008694775.1Lactobacillus crispatusNCK2487SAMN12667804turkey755
14GCA_007713895.1Lactobacillus crispatusNCK1350SAMN10922320Homo sapiens756
15GCA_032376685.1Lactobacillus crispatusUMB4356SAMN37434649Homo sapiens757
16GCA_033803605.1Lactobacillus crispatusUMB5393SAMN38148654Homo sapiens758
17GCA_033803625.1Lactobacillus crispatusUMB5409SAMN38148653Homo sapiens758
18GCA_033803925.1Lactobacillus crispatusUMB6018SAMN38148638Homo sapiens758
19GCA_002218805.1Lactobacillus crispatusUMNLC10SAMN04498982Meleagris gallopavo759
20GCA_033803945.1Lactobacillus crispatusUMB6035SAMN38148636Homo sapiens759
21GCA_033803985.1Lactobacillus crispatusUMB6021SAMN38148637Homo sapiens759
22GCA_002088015.1Lactobacillus crispatusATCC 33820SAMN06624125-762
23GCA_002218775.1Lactobacillus crispatusUMNLC7SAMN04498979Meleagris gallopavo762
24GCA_008694755.1Lactobacillus crispatusNCK2488SAMN12667805Homo sapiens762
25GCA_016162055.1Lactobacillus crispatusLB64SAMN15357369Gallus gallus762
26GCA_018987235.1Lactobacillus crispatusATCC 33820SAMN18472633Homo sapiens762
27GCA_019537355.1Lactobacillus crispatusUBLCp-01SAMN20447867Homo sapiens762
28GCA_001434005.1Lactobacillus crispatus DSM 20584 = JCM 1185 = ATCC 33820DSM 20584SAMN02369387-763
29GCA_002218565.1Lactobacillus crispatusUMNLC2SAMN04498974Meleagris gallopavo763
30GCA_002218645.1Lactobacillus crispatusUMNLC3SAMN04498975Meleagris gallopavo763
31GCA_002218655.1Lactobacillus crispatusUMNLC4SAMN04498976Meleagris gallopavo763
32GCA_002218695.1Lactobacillus crispatusUMNLC6SAMN04498978Meleagris gallopavo763
33GCA_002218685.1Lactobacillus crispatusUMNLC8SAMN04498980Meleagris gallopavo764
34GCA_002218815.1Lactobacillus crispatusUMNLC11SAMN04498983Meleagris gallopavo764
35GCA_002218845.1Lactobacillus crispatusUMNLC13SAMN04498985Meleagris gallopavo764
36GCA_002218885.1Lactobacillus crispatusUMNLC14SAMN04498986Meleagris gallopavo764
37GCA_008694975.1Lactobacillus crispatusNCK953SAMN12667793chicken765
38GCA_008694985.1Lactobacillus crispatusNCK96SAMN12667791Homo sapiens765
39GCA_009769205.1Lactobacillus crispatusDC21.1SAMN11372136Gallus gallus765
40GCA_002218895.1Lactobacillus crispatusUMNLC15SAMN04498987Meleagris gallopavo766
41GCA_002218975.1Lactobacillus crispatusUMNLC20SAMN04498992Meleagris gallopavo766
42GCA_008694205.1Lactobacillus crispatusNCK971SAMN12667796chicken766
43GCA_002218735.1Lactobacillus crispatusUMNLC9SAMN04498981Meleagris gallopavo767
44GCA_002218855.1Lactobacillus crispatusUMNLC12SAMN04498984Meleagris gallopavo767
45GCA_002218925.1Lactobacillus crispatusUMNLC16SAMN04498988Meleagris gallopavo767
46GCA_002219005.1Lactobacillus crispatusUMNLC21SAMN04498993Meleagris gallopavo767
47GCA_002219015.1Lactobacillus crispatusUMNLC24SAMN04498996Meleagris gallopavo767
48GCA_002219045.1Lactobacillus crispatusUMNLC22SAMN04498994Meleagris gallopavo767
49GCA_002219055.1Lactobacillus crispatusUMNLC25SAMN04498997Meleagris gallopavo767
50GCA_002219085.1Lactobacillus crispatusUMNLC23SAMN04498995Meleagris gallopavo767
51GCA_000497065.1Lactobacillus crispatus EM-LC1EM-LC1SAMN02471465Homo sapiens769
52GCA_008694765.1Lactobacillus crispatusNCK978SAMN12667801chicken769
53GCA_008694785.1Lactobacillus crispatusNCK988SAMN12667802chicken769
54GCA_008694865.1Lactobacillus crispatusNCK973SAMN12667798chicken769
55GCA_016162105.1Lactobacillus crispatusLB65SAMN15357370Gallus gallus769
56GCA_008694885.1Lactobacillus crispatusNCK972SAMN12667797chicken770
57GCA_013456995.1Lactobacillus crispatusB4SAMN15516019Homo sapiens770
58GCA_038001385.1Lactobacillus crispatusLMG 18189SAMN33861692Homo sapiens773
59GCA_002218765.1Lactobacillus crispatusUMNLC5SAMN04498977Meleagris gallopavo774
60GCA_008694875.1Lactobacillus crispatusNCK977SAMN12667800chicken775
61GCA_008694925.1Lactobacillus crispatusNCK969SAMN12667795chicken775
62GCA_002218615.1Lactobacillus crispatusUMNLC1SAMN04498973Meleagris gallopavo776
63GCA_000091765.1Lactobacillus crispatus ST1ST1SAMEA2272191-777
64GCA_008694745.1Lactobacillus crispatusNCK1351SAMN12667803Homo sapiens777
65GCA_008694845.1Lactobacillus crispatusNCK974SAMN12667799chicken777
66GCA_008694935.1Lactobacillus crispatusNCK967SAMN12667794chicken777
67GCA_025194115.1Lactobacillus crispatusCIRM-BIA 523SAMN10365338-777
68GCA_965135635.1Lactobacillus crispatusCIP103602SAMEA117660302-777
69GCA_001704465.1Lactobacillus crispatusC25SAMN05513271Gallus gallus778
70GCA_009933525.1Lactobacillus crispatusC25SAMN13634618Gallus gallus778
71GCA_013778545.1Lactobacillus crispatusDSM 29598SAMN14448840-780
72GCA_047782765.1Lactobacillus crispatusT31eSAMN46547635turkey780
73GCA_014982905.1Lactobacillus crispatusDSM 108970SAMN16401879Gallus gallus781
74GCA_016161975.1Lactobacillus crispatusLB69SAMN15357374Gallus gallus781
75GCA_016162005.1Lactobacillus crispatusLB67SAMN15357372Gallus gallus781
76GCA_030373605.1Lactobacillus crispatus140_Shaedl_plusKSAMN34359386Gallus gallus781
77GCA_012843585.1Lactobacillus crispatusWCA-383-APC-5ESAMN14558270Sus scrofa domesticus782
78GCA_002863245.1Lactobacillus crispatusUMB0040SAMN08193691Homo sapiens783
79GCA_016161925.1Lactobacillus crispatusLB70SAMN15357375Gallus gallus783
80GCA_030230975.1Lactobacillus crispatusUMB1096ASAMN35153857Homo sapiens784
81GCA_002218945.1Lactobacillus crispatusUMNLC18SAMN04498990Meleagris gallopavo785
82GCA_002218965.1Lactobacillus crispatusUMNLC19SAMN04498991Meleagris gallopavo785
83GCA_002861815.1Lactobacillus crispatusUMB0085SAMN08193689Homo sapiens785
84GCA_016161995.1Lactobacillus crispatusLB68SAMN15357373Gallus gallus787
85GCA_016901535.1Lactobacillus crispatusAn726SAMN14913593Gallus gallus788
86GCA_016162045.1Lactobacillus crispatusLB66SAMN15357371Gallus gallus794
87GCA_008694965.1Lactobacillus crispatusNCK777SAMN12667792-798
88GCA_025194085.1Lactobacillus crispatusCIRM-BIA 2111SAMN10365340-798
89GCA_038001405.1Lactobacillus crispatusLMG 12003SAMN33861689Homo sapiens798
90GCA_038001425.1Lactobacillus crispatusLMG 12005SAMN33861690Homo sapiens800
91GCA_038001325.1Lactobacillus crispatusLMG 18200SAMN33861694Homo sapiens802
92GCA_014654865.1Lactobacillus crispatusBC5SAMN13648610Homo sapiens803
93GCA_038001345.1Lactobacillus crispatusLMG 18199SAMN33861693Homo sapiens804
94GCA_001541385.1Lactobacillus crispatusVMC3SAMN03893601Homo sapiens805
95GCA_025194105.1Lactobacillus crispatusCIRM-BIA 2112SAMN10365339-808
96GCA_008868575.1Lactobacillus crispatusBIO6272SAMN12856537Homo sapiens809
97GCA_038001465.1Lactobacillus crispatusLMG11440SAMN33861691Homo sapiens810
98GCA_040109495.1Lactobacillus crispatusBC1SAMN41005275-810
99GCA_013487905.1Lactobacillus crispatus1DSAMN13624824Equus caballus814
100GCA_001541405.1Lactobacillus crispatusVMC4SAMN03893602Homo sapiens820