Search results for phylogenetically related strains

 

Rank Compare Genome ID Species Strain BioSample ID Host Allelic distance ARGs VFs PGs PPRS
1GCA_024969715.1Lactiplantibacillus plantarumSRCM210576SAMN30551707Bos taurus0
2GCA_024970125.1Lactiplantibacillus plantarumSRCM210579SAMN30552012Bos taurus1
3GCA_024970145.1Lactiplantibacillus plantarumSRCM210580SAMN30552018Bos taurus1
4GCA_020522885.1Lactiplantibacillus plantarumNMZ-1139SAMD00401071-115
5GCA_038096155.1Lactiplantibacillus plantarumL75SAMN40862348-121
6GCA_039871905.1Lactiplantibacillus plantarumC6SAMN41455268-125
7GCA_018403705.1Lactiplantibacillus plantarumCOY2906SAMD00284714-127
8GCA_035328725.1Lactiplantibacillus plantarumS96-52wSAMN38650141Homo sapiens167
9GCA_001436855.1Lactiplantibacillus plantarumDSM 13273SAMN02797770-190
10GCA_025190025.1Lactiplantibacillus plantarumCIRM-BIA 1108SAMN10365478-191
11GCA_001444495.1Lactiplantibacillus plantarumCRL 1506SAMN04266587goat209
12GCA_902825385.1Lactiplantibacillus plantarumCECT 9491SAMEA6538641Chenopodium quinoa209
13GCA_037996145.1Lactiplantibacillus plantarumIFSAMN40663693-212
14GCA_000474695.1Lactiplantibacillus plantarum WJLWJLSAMN02470914Drosophila melanogaster219
15GCA_001307325.1Lactiplantibacillus plantarum WJLWJLSAMN04017315Drosophila melanogaster220
16GCA_030644445.1Lactiplantibacillus plantarumNAB1SAMN36071663Drosophila224
17GCA_015694325.1Lactiplantibacillus plantarumg22SAMN16795837Drosophila melanogaster226
18GCA_001704315.1Lactiplantibacillus plantarumKPSAMN04346869Drosophila melanogaster227
19GCA_001633575.1Lactiplantibacillus plantarumNizo2814SAMN04528840-228
20GCA_001704335.1Lactiplantibacillus plantarumDFSAMN04346870Drosophila melanogaster228
21GCA_002290185.1Lactiplantibacillus plantarumBDGP2SAMN07593867Drosophila melanogaster Oregon-R modENCODE229
22GCA_013458335.1Lactiplantibacillus plantarumHC-2SAMN13555603Chaeturichthys stigmatias229
23GCA_030463605.1Lactiplantibacillus plantarumHC-2SAMN30247567fish229
24GCA_032818175.1Lactiplantibacillus plantarumEp-M17SAMN30403673-229
25GCA_041941405.1Lactiplantibacillus plantarumGBW-LP001SAMN43515873-230
26GCA_029855105.1Lactiplantibacillus plantarumDMC-S1SAMN34217994Drosophila melanogaster231
27GCA_002220175.1Lactiplantibacillus plantarumdmSAMN06855883-233
28GCA_014132175.1Lactiplantibacillus plantarum-SAMD00199036-236
29GCA_001633255.1Lactiplantibacillus plantarumNAB2SAMN04528998Drosophila melanogaster241
30GCA_001633775.1Lactiplantibacillus plantarumNAB1SAMN04528997Drosophila melanogaster259
31GCA_039725565.1Lactiplantibacillus plantarumDMDL 9010SAMN10081750-275
32GCA_036330065.1Lactiplantibacillus plantarum subsp. plantarumGBCC-GR003SAMN39614441Homo sapiens292
33GCA_044590115.1Lactiplantibacillus plantarumNMGL2SAMN44480978Food sample292
34GCA_001651845.1Lactiplantibacillus plantarumNizo1837SAMN04510483Homo sapiens293
35GCA_004025165.1Lactiplantibacillus plantarumSKT109SAMN10721184-293
36GCA_009889775.1Lactiplantibacillus plantarumLpRasSAMN05645852-293
37GCA_020881935.1Lactiplantibacillus plantarumZW5SAMN22871635-293
38GCA_029854235.1Lactiplantibacillus plantarumMA2SAMN34153834-293
39GCA_040745055.1Lactiplantibacillus plantarumCMTB-TF1SAMN42358598Tremella fuciformis293
40GCA_041679785.1Lactiplantibacillus plantarumDo4_IMSAMN41163062Homo sapiens293
41GCA_004123095.1Lactiplantibacillus plantarumXZ3303SAMN10782618-294
42GCA_018588615.2Lactiplantibacillus plantarum subsp. plantarumM17SAMN17313503-294
43GCA_027854125.1Lactiplantibacillus plantarumHH-LP56SAMN32599285-294
44GCA_039938975.1Lactiplantibacillus plantarumLS 4-4SAMN41451970Homo sapiens294
45GCA_001639565.1Lactiplantibacillus plantarumNizo2260SAMN04525974Homo sapiens295
46GCA_018588665.2Lactiplantibacillus plantarum subsp. plantarumM8SAMN17313476-295
47GCA_039838505.1Lactiplantibacillus plantarum1001287st2_C3_1001287B_170213SAMN31322647Homo sapiens296
48GCA_031461015.1Lactiplantibacillus plantarumKCKM 0594SAMN37256206-297
49GCA_000148815.2Lactiplantibacillus plantarum ST-IIIST-IIISAMN02603896-306
50GCA_003344845.1Lactiplantibacillus plantarumCGMCC12436SAMN09699166-306
51GCA_023207995.1Lactiplantibacillus plantarumLP-F1SAMN14572866-306
52GCA_025723165.1Lactiplantibacillus plantarumBF_15SAMN23674217-306
53GCA_038039495.1Lactiplantibacillus plantarumplantIISAMN40560998activated sludge306
54GCA_038743365.1Lactiplantibacillus plantarumHOM2217SAMN41038019-306
55GCA_039414055.1Lactiplantibacillus plantarumKA9MASAMN41086562-306
56GCA_040084715.1Lactiplantibacillus plantarumBGI-N6SAMN41398132Homo sapiens306
57GCA_007833595.1Lactiplantibacillus plantarumY44SAMN09487401-307
58GCA_017301935.1Lactiplantibacillus plantarum12SAMN13495976Scophthalmus maximus308
59GCA_003627335.1Lactiplantibacillus plantarumZFM9SAMN07303085Homo sapiens309
60GCA_039954855.1Lactiplantibacillus plantarumAHQ-14SAMN41274413-310
61GCA_001484005.1Lactiplantibacillus plantarumLZ95SAMN03854682Homo sapiens311
62GCA_002370985.1Lactiplantibacillus plantarumLp510SAMN05645839-311
63GCA_003589725.1Lactiplantibacillus plantarumZFM55SAMN07305427Homo sapiens311
64GCA_009889735.1Lactiplantibacillus plantarumLp835SAMN05645850-311
65GCA_009889825.1Lactiplantibacillus plantarumLp823SAMN05645849-311
66GCA_009889835.1Lactiplantibacillus plantarumLp546SAMN05645846-311
67GCA_009889865.1Lactiplantibacillus plantarumLp821SAMN05645848-311
68GCA_009889885.1Lactiplantibacillus plantarumLp543SAMN05645845-311
69GCA_009889895.1Lactiplantibacillus plantarumLp542SAMN05645844-311
70GCA_009889925.1Lactiplantibacillus plantarumLp533SAMN05645842-311
71GCA_009889935.1Lactiplantibacillus plantarumLp541SAMN05645843-311
72GCA_009889965.1Lactiplantibacillus plantarumLp520SAMN05645841-311
73GCA_009890055.1Lactiplantibacillus plantarumLp305SAMN05645837-311
74GCA_002576835.1Lactiplantibacillus plantarumPC520SAMN07760023-313
75GCA_001617525.2Lactiplantibacillus plantarumCAUH2SAMN04549363-319
76GCA_028321145.1Lactiplantibacillus plantarum1001216st1_A7_1001216B_150713SAMN31322640Homo sapiens319
77GCA_028321905.1Lactiplantibacillus plantarum1001216st1_H10_1001216B_150713SAMN31322642Homo sapiens319
78GCA_028323095.1Lactiplantibacillus plantarum1001216st1_B5_1001216B_150713SAMN31322641Homo sapiens319
79GCA_046736505.1Lactiplantibacillus plantarumCVASU2SAMN44971013Gallus gallus327
80GCA_001633355.1Lactiplantibacillus plantarumNizo2494SAMN04528232-332
81GCA_001639645.1Lactiplantibacillus plantarumNizo2457SAMN04525983-332
82GCA_001619265.1Lactiplantibacillus plantarumFBR5SAMN04382578-339
83GCA_031583165.1Lactiplantibacillus plantarumJGS49SAMN37319786-347
84GCA_048657045.1Lactiplantibacillus plantarumCAL-6SAMN46169819-347
85GCA_017580975.1Lactiplantibacillus plantarumBGM37SAMN13735607-350
86GCA_022815785.1Lactiplantibacillus plantarum subsp. plantarumHF43SAMN22498463Homo sapiens378
87GCA_041520895.1Lactiplantibacillus plantarumNIGABSAMN43289556-436
88GCA_034479655.1Lactiplantibacillus plantarumS005-52w-4SAMN38650089Homo sapiens448
89GCA_033546835.1Lactiplantibacillus plantarumbeLP1SAMN37988430-520
90GCA_900695295.1Lactiplantibacillus plantarumCECT 9492SAMEA5358520-520
91GCA_900695365.1Lactiplantibacillus plantarumCECT 9571SAMEA5358703-520
92GCA_002749875.1Lactiplantibacillus plantarumRI-393SAMN05717724-521
93GCA_025190145.1Lactiplantibacillus plantarumCIRM-BIA 2184SAMN10365471-524
94GCA_028321915.1Lactiplantibacillus plantarum1001254st1_A1_1001254B_151014SAMN31322643Homo sapiens524
95GCA_029814785.1Lactiplantibacillus plantarumWLPL21SAMN34136147-527
96GCA_029834415.1Lactiplantibacillus plantarumZDY04SAMN34152068-527
97GCA_025189685.1Lactiplantibacillus plantarumCIRM-BIA 2117SAMN10365498-528
98GCA_025189815.1Lactiplantibacillus plantarumCIRM-BIA 2107SAMN10365491-528
99GCA_029542245.1Lactiplantibacillus plantarumEN6SAMN32424931alfalfa528
100GCA_001596095.1Lactiplantibacillus plantarumJBE245SAMN04517536-529