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Rank	Genome ID	Species	Strain	BioSample ID	Host	Allelic distance	ARGs	VFs	PGs	PPRS
1	GCA_025194775.1	Lactobacillus acidophilus	CIRM-BIA 2087	SAMN10365300	-	0	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
2	GCA_000934625.1	Lactobacillus acidophilus	FSI4	SAMN03274004	-	72	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
3	GCA_003061885.1	Lactobacillus acidophilus	DS20_1	SAMN06464087	Homo sapiens	72	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
4	GCA_017009515.1	Lactobacillus acidophilus	BCRC 14065	SAMN14363925	-	72	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
5	GCA_024665555.1	Lactobacillus acidophilus	LA-5	SAMN29862214	Homo sapiens	72	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
6	GCA_025194905.1	Lactobacillus acidophilus	CIRM-BIA 448	SAMN10365296	-	72	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
7	GCA_025495965.1	Lactobacillus acidophilus	CUL21B	SAMN09704984	Homo sapiens	72	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
8	GCA_039880475.1	Lactobacillus acidophilus	NCFM	SAMN41473774	Homo sapiens	72	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
9	GCA_040954475.1	Lactobacillus acidophilus	NCFM_HOWARU_Commercial	SAMN41473775	-	72	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
10	GCA_000442865.1	Lactobacillus acidophilus CIRM-BIA 442	CIRM-BIA 442	SAMEA2272381	-	73	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
11	GCA_002406675.1	Lactobacillus acidophilus	P2	SAMN07665576	-	73	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
12	GCA_002914945.1	Lactobacillus acidophilus	BA05	SAMN07187785	-	73	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
13	GCA_003062045.1	Lactobacillus acidophilus	DS1_1A	SAMN05583775	Homo sapiens	73	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
14	GCA_017009485.1	Lactobacillus acidophilus	BCRC 12255	SAMN14363914	-	73	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
15	GCA_017009605.1	Lactobacillus acidophilus	BCRC 16099	SAMN14371312	-	73	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
16	GCA_017009715.1	Lactobacillus acidophilus	La-5	SAMN14401351	-	73	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
17	GCA_025194705.1	Lactobacillus acidophilus	CIRM-BIA 903	SAMN10365303	-	73	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
18	GCA_025194745.1	Lactobacillus acidophilus	CIRM-BIA 902	SAMN10365302	-	73	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
19	GCA_025194875.1	Lactobacillus acidophilus	CIRM-BIA 446	SAMN10365294	-	73	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
20	GCA_036347815.1	Lactobacillus acidophilus	MCC 0241	SAMN39602792	-	73	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
21	GCA_013867605.1	Lactobacillus acidophilus	s-13	SAMN15579847	-	74	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
22	GCA_017695935.1	Lactobacillus acidophilus	APC2845	SAMN13342918	Homo sapiens	74	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
23	GCA_033598375.1	Lactobacillus acidophilus	NSL	SAMN38110916	-	74	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
24	GCA_003053245.1	Lactobacillus acidophilus	DS10_1A	SAMN05583778	Homo sapiens	75	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
25	GCA_003061925.1	Lactobacillus acidophilus	DS9_1A	SAMN05583792	Homo sapiens	75	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
26	GCA_013342945.1	Lactobacillus acidophilus	LA-G80-111	SAMN15165794	Homo sapiens	75	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
27	GCA_017009695.1	Lactobacillus acidophilus	BCRC 80064	SAMN14371424	Homo sapiens	75	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
28	GCA_018252545.1	Lactobacillus acidophilus	LA-G80	SAMN18679498	-	75	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
29	GCA_033569435.1	Lactobacillus acidophilus	P42	SAMN37691132	Gallus gallus	75	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
30	GCA_040785195.1	Lactobacillus acidophilus	gbc_A	SAMN41082096	-	75	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
31	GCA_003061905.1	Lactobacillus acidophilus	DS13_1B	SAMN05583783	Homo sapiens	76	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
32	GCA_003061945.1	Lactobacillus acidophilus	DS8_1A	SAMN05583791	Homo sapiens	76	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
33	GCA_003061985.1	Lactobacillus acidophilus	DS5_1A	SAMN05583788	Homo sapiens	76	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
34	GCA_008868625.1	Lactobacillus acidophilus	BIO6307	SAMN12856535	Homo sapiens	76	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
35	GCA_025194825.1	Lactobacillus acidophilus	CIRM-BIA 442	SAMN10365298	-	76	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
36	GCA_037996565.1	Lactobacillus acidophilus	ATA-LAP1201	SAMN40696269	Homo sapiens	76	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
37	GCA_003053135.1	Lactobacillus acidophilus	DS24_1	SAMN06464090	Homo sapiens	77	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
38	GCA_003061965.1	Lactobacillus acidophilus	DS13_1A	SAMN05583782	Homo sapiens	77	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
39	GCA_003062025.1	Lactobacillus acidophilus	DS11_1A	SAMN05583779	Homo sapiens	77	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
40	GCA_029334915.1	Lactobacillus acidophilus	MehediL2	SAMN33770778	-	77	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
41	GCA_036350535.1	Lactobacillus acidophilus	MCC 0257	SAMN39603457	-	77	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
42	GCA_037996485.1	Lactobacillus acidophilus	ATA-LTC-La060301	SAMN40696271	Homo sapiens	77	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
43	GCA_021229035.1	Lactobacillus acidophilus	NBIMCC 8242 (180)	SAMN23827470	-	78	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
44	GCA_040883405.1	Lactobacillus acidophilus	AM-LA-19	SAMN42007032	-	78	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
45	GCA_000389675.2	Lactobacillus acidophilus La-14	La-14	SAMN02603216	-	81	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
46	GCA_032463485.1	Lactobacillus acidophilus	CICC6074	SAMN37638716	-	83	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
47	GCA_002286215.1	Lactobacillus acidophilus	LA1	SAMN05631052	Homo sapiens	84	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
48	GCA_003641085.1	Lactobacillus acidophilus	UBLA-34	SAMN10136005	-	85	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
49	GCA_003062005.1	Lactobacillus acidophilus	DS2_1A	SAMN05583785	Homo sapiens	89	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
50	GCA_002224305.1	Lactobacillus acidophilus	ATCC 53544	SAMN07357495	Homo sapiens	96	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
51	GCA_046940125.1	Lactobacillus acidophilus	SBS-CC-2136	SAMN36764863	-	106	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
52	GCA_001639165.1	Lactobacillus acidophilus	WG-LB-IV	SAMN04628015	-	114	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
53	GCA_009742735.1	Lactobacillus acidophilus	LA_AVK1	SAMN13198235	-	122	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
54	GCA_000011985.1	Lactobacillus acidophilus NCFM	NCFM	SAMN02603047	-	126	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
55	GCA_009741835.1	Lactobacillus acidophilus	LA_AVK2	SAMN13198280	-	127	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
56	GCA_017009595.1	Lactobacillus acidophilus	BCRC 17008	SAMN14371317	Homo sapiens	135	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
57	GCA_017009655.1	Lactobacillus acidophilus	BCRC 17481	SAMN14371318	-	140	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
58	GCA_025194765.1	Lactobacillus acidophilus	CIRM-BIA 441	SAMN10365301	-	142	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
59	GCA_013867555.1	Lactobacillus acidophilus	s-4	SAMN15579838	-	158	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
60	GCA_022509485.1	Lactobacillus acidophilus	QAULAN51	SAMN20114166	-	158	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
61	GCA_023093425.1	Lactobacillus acidophilus	PB2021-BA04	SAMN18297454	cattle	158	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
62	GCA_000469745.1	Lactobacillus acidophilus DSM 9126	DSM 9126	SAMEA2272239	-	159	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
63	GCA_017009725.1	Lactobacillus acidophilus	LA1063	SAMN14422845	-	159	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
64	GCA_025194805.1	Lactobacillus acidophilus	CIRM-BIA 443	SAMN10365299	-	160	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
65	GCA_030369715.1	Lactobacillus acidophilus	W626	SAMN35796814	-	162	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
66	GCA_965136345.1	Lactobacillus acidophilus	CIP103601	SAMEA117660301	-	164	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
67	GCA_003047065.1	Lactobacillus acidophilus	DSM 20079	SAMN06606133	Homo sapiens	173	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
68	GCA_017009575.1	Lactobacillus acidophilus	BCRC 16092	SAMN14363928	-	173	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
69	GCA_024397395.1	Lactobacillus acidophilus	HN017	SAMN29766956	-	174	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
70	GCA_025194725.1	Lactobacillus acidophilus	CIRM-BIA 904	SAMN10365304	-	176	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
71	GCA_000786395.1	Lactobacillus acidophilus	ATCC 4356	SAMN03105773	Homo sapiens	178	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
72	GCA_000469705.1	Lactobacillus acidophilus DSM 20079 = JCM 1132 = NBRC 13951 = CIP 76.13	CIP 76.13	SAMEA2272342	-	184	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
73	GCA_025194685.1	Lactobacillus acidophilus	CIRM-BIA 1674	SAMN10365307	-	186	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
74	GCA_000442825.1	Lactobacillus acidophilus DSM 20242	DSM 20242	SAMEA2272474	-	190	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
75	GCA_001433895.1	Lactobacillus acidophilus DSM 20079 = JCM 1132 = NBRC 13951 = CIP 76.13	DSM 20079	SAMN02369388	Homo sapiens	192	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
76	GCA_024665075.1	Lactobacillus acidophilus	LA-2	SAMN29862208	Homo sapiens	216	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
77	GCA_025194925.1	Lactobacillus acidophilus	CIRM-BIA 445	SAMN10365293	-	221	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
78	GCA_000469765.1	Lactobacillus acidophilus CIRM-BIA 445	CIRM-BIA 445	SAMEA2272655	-	226	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
79	GCA_021432145.1	Lactobacillus acidophilus	5460	SAMN24563600	Homo sapiens	227	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
80	GCA_020883435.1	Lactobacillus acidophilus	NC55	SAMN23011956	-	230	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
81	GCA_025665255.1	Lactobacillus acidophilus	NC56	SAMN31046618	-	233	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
82	GCA_032917925.1	Lactobacillus acidophilus	LA01	SAMN37748333	-	243	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
83	GCA_017009475.1	Lactobacillus acidophilus	BCRC 14079	SAMN14363926	-	255	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
84	GCA_000159715.1	Lactobacillus acidophilus ATCC 4796	ATCC 4796	SAMN00001471	Homo sapiens	256	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
85	GCA_025194665.1	Lactobacillus acidophilus	CIRM-BIA 437	SAMN10365306	-	280	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
86	GCA_017009585.1	Lactobacillus acidophilus	BCRC 17486	SAMN14371319	Homo sapiens	416	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
87	GCA_025194865.1	Lactobacillus acidophilus	CIRM-BIA 439	SAMN10365297	-	441	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
88	GCA_024218715.1	Lactobacillus acidophilus	SSLB4	SAMN29416702	sheep	576	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
89	GCA_041679835.1	Lactobacillus acidophilus	Do3_PF	SAMN41163061	Homo sapiens	584	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
90	GCA_003952845.1	Lactobacillus acidophilus	YT1	SAMN08142761	rat	1040	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
91	GCA_025194645.1	Lactobacillus acidophilus	CIRM-BIA 444	SAMN10365305	-	1344	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
92	GCA_025194845.1	Lactobacillus acidophilus	CIRM-BIA 447	SAMN10365295	-	1345	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
93	GCA_041897505.1	Lactobacillus acidophilus	L177	SAMN43427262	-	1496	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
94	GCA_046581355.1	Lactobacillus acidophilus	GLA09	SAMN37813348	Beagle	1499	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score

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