Search results for phylogenetically related strains

 

Rank Compare Genome ID Species Strain BioSample ID Host Allelic distance ARGs VFs PGs PPRS
1GCA_020844665.1Lactiplantibacillus plantarumFUA3428SAMN21235229-0
2GCA_026127775.1Lactiplantibacillus plantarumFUA3428SAMN21845660-0
3GCA_034333585.1Lactiplantibacillus plantarumcqf-43SAMN37720970sow feces83
4GCA_025189965.1Lactiplantibacillus plantarumCIRM-BIA 653SAMN10365483-87
5GCA_020844685.1Lactiplantibacillus plantarumFUA3302SAMN21227964-91
6GCA_026127685.1Lactiplantibacillus plantarumFUA3302SAMN21845655-91
7GCA_017576965.1Lactiplantibacillus plantarumKLDS1.0386SAMN18323758-95
8GCA_019599425.1Lactiplantibacillus plantarumJZ6SAMN20526383-106
9GCA_024181685.1Lactiplantibacillus plantarumP9SAMN15795378-106
10GCA_041344945.1Lactiplantibacillus plantarumMD159SAMN43087929-112
11GCA_043951895.1Lactiplantibacillus plantarumLP3-9SAMN44321994-117
12GCA_043951965.1Lactiplantibacillus plantarumLP3-5SAMN44321959-117
13GCA_004101605.1Lactiplantibacillus plantarumSRCM103362SAMN10743347-126
14GCA_030061935.1Lactiplantibacillus plantarumB3SAMN25008669-167
15GCA_030061985.1Lactiplantibacillus plantarumSS6SAMN25008671-167
16GCA_001540965.1Lactiplantibacillus plantarumLp1612SAMN03702585bovine206
17GCA_022810685.1Lactiplantibacillus plantarumSCB0151SAMN22106488Kefir grain207
18GCA_030464485.1Lactiplantibacillus plantarumFCQNA32M4SAMN12027236Homo sapiens210
19GCA_009756965.1Lactiplantibacillus plantarumBK-022SAMN11655668-214
20GCA_008868495.1Lactiplantibacillus plantarumBIO1096SAMN12856541-220
21GCA_001272315.2Lactiplantibacillus plantarum subsp. plantarumCGMCC 1.557SAMN03976562-227
22GCA_017580935.1Lactiplantibacillus plantarumEL11SAMN13735608-231
23GCA_036321505.1Lactiplantibacillus plantarumCGMCC 14177SAMN39555870-233
24GCA_003966855.1Lactiplantibacillus plantarum-SAMD00097254-242
25GCA_031085385.1Lactiplantibacillus plantarumBRD3ASAMN33981270-249
26GCA_001633565.1Lactiplantibacillus plantarumNizo2801SAMN04528826-255
27GCA_001715615.1Lactiplantibacillus plantarumLY-78SAMN04437173-262
28GCA_031461055.1Lactiplantibacillus plantarumKCKM 0106SAMN37221010-279
29GCA_002914965.1Lactiplantibacillus plantarumBP06SAMN07187784-288
30GCA_003023825.1Lactiplantibacillus plantarumJDARSHSAMN08741665-288
31GCA_003053035.1Lactiplantibacillus plantarumDS18_9SAMN06464105Homo sapiens288
32GCA_003061725.1Lactiplantibacillus plantarumDS6_9SAMN05726897Homo sapiens288
33GCA_003061765.1Lactiplantibacillus plantarumDS14_9SAMN05726895Homo sapiens288
34GCA_003061785.1Lactiplantibacillus plantarumDS9_9SAMN05726899Homo sapiens288
35GCA_003061805.1Lactiplantibacillus plantarumDS11_9SAMN05726893Homo sapiens288
36GCA_003143915.1Lactiplantibacillus plantarumHAC01SAMN09087848-288
37GCA_003597595.1Lactiplantibacillus plantarumATG-K6SAMN10094369-288
38GCA_003597615.1Lactiplantibacillus plantarumATG-K8SAMN10094466-288
39GCA_006364975.1Lactiplantibacillus plantarumNTTN08SAMN11952115Homo sapiens288
40GCA_021279005.2Lactiplantibacillus plantarum022AESAMN09662691-288
41GCA_026183415.1Lactiplantibacillus plantarumBRD_L15SAMN31580342Canis lupus familiaris dachshund288
42GCA_026275505.1Lactiplantibacillus plantarumV1SAMN31726903cow288
43GCA_028323145.1Lactiplantibacillus plantarum1001274st1_G7_1001274B_151102SAMN31322645Homo sapiens288
44GCA_040822595.1Lactiplantibacillus plantarumATA-LPC98052SAMN41784237-288
45GCA_040883545.1Lactiplantibacillus plantarumAM-LP-81SAMN42007028-288
46GCA_042691645.1Lactiplantibacillus plantarumLP01SAMN43919990-288
47GCA_045348195.1Lactiplantibacillus plantarumTCI999SAMN40716503-288
48GCA_045528025.1Lactiplantibacillus plantarumFAM 25263SAMN43257761-288
49GCA_046109905.1Lactiplantibacillus plantarumTCI227SAMN40890045-288
50GCA_047495545.1Lactiplantibacillus plantarumOBM7SAMN46400537-288
51GCA_048657025.1Lactiplantibacillus plantarumRAL-4SAMN46169820-288
52GCA_002024845.1Lactiplantibacillus plantarumCLP0611SAMN06240352-289
53GCA_003586485.1Lactiplantibacillus plantarumDR7SAMN09721150Bos taurus289
54GCA_013256965.1Lactiplantibacillus plantarum subsp. plantarumG1SAMN14979736-289
55GCA_040785175.1Lactiplantibacillus plantarumgbc_dSAMN41082099-289
56GCA_040785225.1Lactiplantibacillus plantarumgbc_CSAMN41082098-289
57GCA_040790905.1Lactiplantibacillus plantarumAUSA004SAMN41916868-289
58GCA_047649195.1Lactiplantibacillus plantarumV2SAMN46400503-289
59GCA_003053045.1Lactiplantibacillus plantarumDS23_9SAMN06464107Homo sapiens290
60GCA_028323205.1Lactiplantibacillus plantarum1001274st1_B5_1001274B_151102SAMN31322644Homo sapiens290
61GCA_025212155.1Lactiplantibacillus plantarumCIRM-BIA 2224SAMN10365325-292
62GCA_031597175.1Lactiplantibacillus plantarumVHProbi QSH01SAMN37344986-488
63GCA_044731905.1Lactiplantibacillus plantarumDSM 12028SAMN41278858-584
64GCA_022558425.1Lactiplantibacillus plantarumSTSAMN24424940-591
65GCA_023108905.1Lactiplantibacillus plantarumM4L1SAMN26138624-618
66GCA_001639595.1Lactiplantibacillus plantarumNizo2263SAMN04525976-629
67GCA_031877725.1Lactiplantibacillus plantarumSYBC-SM3SAMN35789079-629
68GCA_034478365.1Lactiplantibacillus plantarumS034-52w-2SAMN38650131Homo sapiens634
69GCA_001617525.2Lactiplantibacillus plantarumCAUH2SAMN04549363-635
70GCA_018588615.2Lactiplantibacillus plantarum subsp. plantarumM17SAMN17313503-635
71GCA_018588665.2Lactiplantibacillus plantarum subsp. plantarumM8SAMN17313476-635
72GCA_020881935.1Lactiplantibacillus plantarumZW5SAMN22871635-635
73GCA_029854235.1Lactiplantibacillus plantarumMA2SAMN34153834-635
74GCA_034422915.1Lactiplantibacillus plantarumYW2189SAMN38636266Homo sapiens635
75GCA_036330065.1Lactiplantibacillus plantarum subsp. plantarumGBCC-GR003SAMN39614441Homo sapiens635
76GCA_039838505.1Lactiplantibacillus plantarum1001287st2_C3_1001287B_170213SAMN31322647Homo sapiens635
77GCA_040745055.1Lactiplantibacillus plantarumCMTB-TF1SAMN42358598Tremella fuciformis635
78GCA_000148815.2Lactiplantibacillus plantarum ST-IIIST-IIISAMN02603896-636
79GCA_001639565.1Lactiplantibacillus plantarumNizo2260SAMN04525974Homo sapiens636
80GCA_001651845.1Lactiplantibacillus plantarumNizo1837SAMN04510483Homo sapiens636
81GCA_001672035.1Lactiplantibacillus plantarumNCU116SAMN05162259-636
82GCA_003344845.1Lactiplantibacillus plantarumCGMCC12436SAMN09699166-636
83GCA_007833595.1Lactiplantibacillus plantarumY44SAMN09487401-636
84GCA_009889775.1Lactiplantibacillus plantarumLpRasSAMN05645852-636
85GCA_017301935.1Lactiplantibacillus plantarum12SAMN13495976Scophthalmus maximus636
86GCA_023207995.1Lactiplantibacillus plantarumLP-F1SAMN14572866-636
87GCA_025723165.1Lactiplantibacillus plantarumBF_15SAMN23674217-636
88GCA_027854125.1Lactiplantibacillus plantarumHH-LP56SAMN32599285-636
89GCA_031461015.1Lactiplantibacillus plantarumKCKM 0594SAMN37256206-636
90GCA_038039495.1Lactiplantibacillus plantarumplantIISAMN40560998activated sludge636
91GCA_038743365.1Lactiplantibacillus plantarumHOM2217SAMN41038019-636
92GCA_039938975.1Lactiplantibacillus plantarumLS 4-4SAMN41451970Homo sapiens636
93GCA_039954855.1Lactiplantibacillus plantarumAHQ-14SAMN41274413-636
94GCA_040084715.1Lactiplantibacillus plantarumBGI-N6SAMN41398132Homo sapiens636
95GCA_041679785.1Lactiplantibacillus plantarumDo4_IMSAMN41163062Homo sapiens636
96GCA_044590115.1Lactiplantibacillus plantarumNMGL2SAMN44480978Food sample636
97GCA_002173655.1Lactiplantibacillus plantarumSRCM102022SAMN07125944-637
98GCA_004025165.1Lactiplantibacillus plantarumSKT109SAMN10721184-637
99GCA_004123095.1Lactiplantibacillus plantarumXZ3303SAMN10782618-637
100GCA_039414055.1Lactiplantibacillus plantarumKA9MASAMN41086562-637