Search results for phylogenetically related strains

 

Rank Compare Genome ID Species Strain BioSample ID Host Allelic distance ARGs VFs PGs PPRS
1GCA_026967195.1Lacticaseibacillus paracaseiLpc_yogurt_B5SAMN32062178-0
2GCA_026967205.1Lacticaseibacillus paracaseiLpc_yogurt_B4SAMN32062177-0
3GCA_026967275.1Lacticaseibacillus paracaseiLpc_yogurt_B3SAMN32062176-0
4GCA_026967295.1Lacticaseibacillus paracaseiLpc_yogurt_B2SAMN32062175-0
5GCA_026967245.1Lacticaseibacillus paracaseiLpc_yogurt_B6SAMN32062179-3
6GCA_041679805.1Lacticaseibacillus paracaseiAPYSAMN41163063Homo sapiens4
7GCA_009996805.1Lacticaseibacillus paracaseiD3-5SAMN13905290Homo sapiens6
8GCA_003712965.1Lacticaseibacillus paracaseiFAM6410SAMN04088893-85
9GCA_025190565.1Lacticaseibacillus paracaseiCIRM-BIA 2128SAMN10365446-115
10GCA_037414215.1Lacticaseibacillus paracaseiLPC100SAMN39212581Homo sapiens115
11GCA_041117985.1Lacticaseibacillus paracaseiMYA5SAMN42930119-211
12GCA_004141835.1Lacticaseibacillus paracaseiSRCM103299SAMN10849469-237
13GCA_003712565.1Lacticaseibacillus paracaseiFAM19317SAMN04088878-251
14GCA_026797475.1Lacticaseibacillus paracaseiCBP-1042SAMN27675067-251
15GCA_028878305.1Lacticaseibacillus paracaseiNRRL B-456SAMN23708197-252
16GCA_003712985.1Lacticaseibacillus paracaseiFAM8140SAMN04088895-253
17GCA_025190725.1Lacticaseibacillus paracaseiCIRM-BIA 699SAMN10365439-253
18GCA_037283385.1Lacticaseibacillus paracaseiNRC_P4SAMN32629231cow254
19GCA_016887785.1Lacticaseibacillus paracasei2306SAMN17562096-255
20GCA_002148805.1Lacticaseibacillus paracaseiDPC4206SAMN06220137-267
21GCA_002148885.1Lacticaseibacillus paracaseiDPC4536SAMN06463780-267
22GCA_016757695.1Lacticaseibacillus paracasei subsp. toleransS-NBSAMN17359333-267
23GCA_024498315.1Lacticaseibacillus paracaseiSMN-LBKSAMN29933592-267
24GCA_024622515.1Lacticaseibacillus paracaseiDSM 28675SAMN29593134Mus musculus267
25GCA_028320385.1Lacticaseibacillus paracasei1001270st1_F8_1001270H_150608SAMN31322638Homo sapiens267
26GCA_035586595.1Lacticaseibacillus paracaseiHP-B1337SAMN38922877-267
27GCA_036281375.1Lacticaseibacillus paracaseiCUL07ASAMN09708453-267
28GCA_040785095.1Lacticaseibacillus paracaseigbc_fSAMN41082101-267
29GCA_045808845.1Lacticaseibacillus paracaseiMSR2SAMN45146297-267
30GCA_049191845.1Lacticaseibacillus paracaseiIATA110SAMN45053973Homo sapiens267
31GCA_049205075.1Lacticaseibacillus paracaseiIATA109SAMN45053972Homo sapiens267
32GCA_000309785.1Lacticaseibacillus paracaseiLpc-37SAMN02472013-268
33GCA_003434205.1Lacticaseibacillus paracaseiAM33-2ACSAMN09736452Homo sapiens268
34GCA_016757675.1Lacticaseibacillus paracasei subsp. toleransS-NA5SAMN17359331-268
35GCA_030710015.1Lacticaseibacillus paracaseiULE721SAMN33593465-268
36GCA_041283745.2Lacticaseibacillus paracaseiORD 0998SAMN43000418Homo sapiens268
37GCA_048282615.1Lacticaseibacillus paracasei439SAMN46889214-268
38GCA_000410235.1Lacticaseibacillus paracasei subsp. paracasei Lpp74Lpp74SAMN02469728-283
39GCA_000410195.1Lacticaseibacillus paracasei subsp. paracasei Lpp219Lpp219SAMN02469710Homo sapiens284
40GCA_000309665.1Lacticaseibacillus paracaseiM36SAMN02472000-285
41GCA_049201625.1Lacticaseibacillus paracaseiUBLPc-87SAMN47217620-288
42GCA_025190525.1Lacticaseibacillus paracaseiCIRM-BIA 1517SAMN10365450-307
43GCA_015693945.1Lacticaseibacillus paracasei subsp. toleransZY-1SAMN16861159-325
44GCA_008369945.1Lacticaseibacillus paracaseiDTA93SAMN12661681Homo sapiens328
45GCA_016890245.1Lacticaseibacillus paracaseiYT170SAMN17818118Rex rabbit328
46GCA_019990865.1Lacticaseibacillus paracaseicek-R2SAMN21367938beet334
47GCA_000309685.1Lacticaseibacillus paracaseiT71499SAMN02472001Homo sapiens336
48GCA_000410055.1Lacticaseibacillus paracasei subsp. paracasei Lpp227Lpp227SAMN02641494Homo sapiens340
49GCA_036762895.1Lacticaseibacillus paracasei1311_IL3157SAMN37904766animal340
50GCA_030360845.1Lacticaseibacillus paracaseiTOM.1339SAMN35776905-341
51GCA_025757505.1Lacticaseibacillus paracaseiNG-LCU-ST2SAMN31037893Maize348
52GCA_042015765.1Lacticaseibacillus paracaseiZJUZ2-3SAMN43503360Homo sapiens354
53GCA_003712245.1Lacticaseibacillus paracaseiFAM18108SAMN04088862-357
54GCA_009931715.1Lacticaseibacillus paracaseiCACC 566SAMN13871807Canine357
55GCA_012955485.1Lacticaseibacillus paracasei347-16SAMN13259076Homo sapiens357
56GCA_024637915.1Lacticaseibacillus paracaseiVHProbi F11SAMN27160580Homo sapiens357
57GCA_028322945.1Lacticaseibacillus paracasei1001295st1_G5_1001295H_181012SAMN31322639Homo sapiens357
58GCA_029906365.1Lacticaseibacillus paracasei subsp. paracaseiMI3SAMN34106059Homo sapiens357
59GCA_037283365.1Lacticaseibacillus paracaseiNRC_P5SAMN32629232buffalo357
60GCA_037283435.1Lacticaseibacillus paracaseiNRC_P6SAMN32629233buffalo357
61GCA_037283545.1Lacticaseibacillus paracaseiNRC_P3SAMN32629230cow357
62GCA_008329845.1Lacticaseibacillus paracasei10266SAMN09874024Homo sapiens358
63GCA_015476175.1Lacticaseibacillus paracasei subsp. toleransMGB0747SAMN16668663-360
64GCA_002904305.1Lacticaseibacillus paracaseiCCC B1205SAMN03813856-361
65GCA_015476195.1Lacticaseibacillus paracasei subsp. toleransMGB0761SAMN16668817-361
66GCA_026013725.1Lacticaseibacillus paracaseiATG-E1SAMN31433209Hono sapiens363
67GCA_001244395.1Lacticaseibacillus paracaseiL9SAMN03853751Homo sapiens368
68GCA_000410455.1Lacticaseibacillus paracasei subsp. paracasei Lpp43Lpp43SAMN02469725-369
69GCA_017638905.1Lacticaseibacillus paracaseiHL182SAMN18236778Homo sapiens370
70GCA_013307125.1Lacticaseibacillus paracaseiLp02SAMN11489091Homo sapiens371
71GCA_030480425.1Lacticaseibacillus paracaseiL14SAMN33263285-373
72GCA_003966835.1Lacticaseibacillus paracasei-SAMD00094822-374
73GCA_007637635.1Lacticaseibacillus paracaseiNJSAMN12319598-377
74GCA_029625355.1Lacticaseibacillus paracaseiVHProbi OF10SAMN26144441-377
75GCA_003640765.1Lacticaseibacillus paracaseiUBLPC-35SAMN10147909-381
76GCA_028878105.1Lacticaseibacillus paracaseiTMW 1.300SAMN23708206-384
77GCA_036430865.1Lacticaseibacillus paracaseiFI11579SAMN33193087-392
78GCA_046939035.1Lacticaseibacillus paracasei subsp. paracaseiM587ASAMN35847929wild boar403
79GCA_034044075.1Lacticaseibacillus paracaseiMP11ASAMN37950489-414
80GCA_000410015.1Lacticaseibacillus paracasei subsp. paracasei Lpp221Lpp221SAMN02469717Homo sapiens419
81GCA_036431975.1Lacticaseibacillus paracaseiCMAN-SucSAMN35624267-420
82GCA_032229185.1Lacticaseibacillus paracaseiNC4SAMN37472141-453
83GCA_002079285.1Lacticaseibacillus paracaseiIIASAMN04571918-455
84GCA_036432035.1Lacticaseibacillus paracaseiLMAN-KhSAMN35624263-456
85GCA_025252385.1Lacticaseibacillus paracaseiVHProbi O44SAMN30550144Homo sapiens458
86GCA_000410075.1Lacticaseibacillus paracasei subsp. paracasei CNCM I-4648CNCM I-4648SAMN03177793-471
87GCA_002257625.1Lacticaseibacillus paracaseiTK1501SAMN05921089-473
88GCA_028609725.1Lacticaseibacillus paracaseiCLP-C10SAMN14677579-473
89GCA_003712785.1Lacticaseibacillus paracaseiFAM6161SAMN04088891-477
90GCA_003713005.1Lacticaseibacillus paracaseiFAM7821SAMN04088894-482
91GCA_001895185.1Lacticaseibacillus paracasei-SAMD00029052-483
92GCA_012932835.1Lacticaseibacillus paracaseiCRF28SAMN05660651-483
93GCA_030361365.1Lacticaseibacillus paracaseiTOM.9SAMN35776875-484
94GCA_012932815.1Lacticaseibacillus paracaseiUW1SAMN05660434-492
95GCA_000309645.1Lacticaseibacillus paracaseiCRF28SAMN02472005Homo sapiens495
96GCA_044990665.1Lacticaseibacillus paracaseiFNCPS K7SAMN44657157-495
97GCA_000410435.1Lacticaseibacillus paracasei subsp. paracasei CNCM I-4649CNCM I-4649SAMN02469704-496
98GCA_004078565.1Lacticaseibacillus paracaseiSRCM103424SAMN10743383-504
99GCA_015319235.1Lacticaseibacillus paracasei subsp. toleransMGB0543SAMN16657553-518
100GCA_025215665.1Lacticaseibacillus paracaseiALAC-4SAMN10688387-519