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Rank	Genome ID	Species	Strain	BioSample ID	Host	Allelic distance	ARGs	VFs	PGs	PPRS
1	GCA_028201935.1	Bifidobacterium bifidum	1025st1_E4_1025SCRN_200924	SAMN31321351	Homo sapiens	0	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
2	GCA_028202225.1	Bifidobacterium bifidum	1025st1_F12_1025SCRN_200924	SAMN31321352	Homo sapiens	13	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
3	GCA_028202265.1	Bifidobacterium bifidum	1025st1_D2_1025SCRN_200924	SAMN31321350	Homo sapiens	13	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
4	GCA_028202305.1	Bifidobacterium bifidum	1025st1_A12_1025SCRN_200924	SAMN31321347	Homo sapiens	13	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
5	GCA_039913395.1	Bifidobacterium bifidum	1025st1_C5_1025SCRN_200924	SAMN31321349	Homo sapiens	15	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
6	GCA_028202255.1	Bifidobacterium bifidum	1025st1_B5_1025SCRN_200924	SAMN31321348	Homo sapiens	16	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
7	GCA_028201895.1	Bifidobacterium bifidum	G6_h1001283B150217_200217	SAMN31321369	Homo sapiens	971	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
8	GCA_028201955.1	Bifidobacterium bifidum	C7_h1001283B150217_200217	SAMN31321368	Homo sapiens	971	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
9	GCA_028202035.1	Bifidobacterium bifidum	B1_h1001283B150217_200217	SAMN31321367	Homo sapiens	971	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
10	GCA_028202125.1	Bifidobacterium bifidum	1001283st1_F2_1001283B150304_161114	SAMN31321343	Homo sapiens	971	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
11	GCA_028202165.1	Bifidobacterium bifidum	1001283st1_F3_1001283B150210_160208	SAMN31321344	Homo sapiens	971	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
12	GCA_028202215.1	Bifidobacterium bifidum	1001283st1_F5_1001283B150209_150212	SAMN31321345	Homo sapiens	971	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
13	GCA_028202335.1	Bifidobacterium bifidum	1001283st1_A1_1001285H_161024	SAMN31321336	Homo sapiens	971	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
14	GCA_028202355.1	Bifidobacterium bifidum	1001283st1_E8_1001285I_161205	SAMN31321342	Homo sapiens	971	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
15	GCA_028202365.1	Bifidobacterium bifidum	1001283st1_B11_1001285I_161205	SAMN31321337	Homo sapiens	971	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
16	GCA_028202575.1	Bifidobacterium bifidum	1001283st1_E8_1001283B150210_160208	SAMN31321341	Homo sapiens	971	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
17	GCA_028202605.1	Bifidobacterium bifidum	1001283st1_D6_1001283B150209_150212	SAMN31321340	Homo sapiens	971	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
18	GCA_028202725.1	Bifidobacterium bifidum	1001283st1_C8_1001283B150304_161114	SAMN31321339	Homo sapiens	971	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
19	GCA_028203775.1	Bifidobacterium bifidum	F11_h1001283B150217_200217	SAMN31321378	Homo sapiens	971	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
20	GCA_028203815.1	Bifidobacterium bifidum	F5_h1001283B150217_200217	SAMN31321376	Homo sapiens	971	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
21	GCA_028203875.1	Bifidobacterium bifidum	H3_h1001283B150217_200217	SAMN31321371	Homo sapiens	971	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
22	GCA_028203895.1	Bifidobacterium bifidum	H2_h1001283B150217_200217	SAMN31321370	Homo sapiens	971	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
23	GCA_039913365.1	Bifidobacterium bifidum	C1_h1001283B150217_200217	SAMN31321374	Homo sapiens	971	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
24	GCA_028202155.1	Bifidobacterium bifidum	1001283st1_G4_1001283B150217_161031	SAMN31321346	Homo sapiens	972	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
25	GCA_028202295.1	Bifidobacterium bifidum	1001283st1_C1_1001283B150225_161107	SAMN31321338	Homo sapiens	972	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
26	GCA_028203615.1	Bifidobacterium bifidum	A12_h1001283B150217_200217	SAMN31321372	Homo sapiens	972	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
27	GCA_028203705.1	Bifidobacterium bifidum	G10_h1001283B150217_200217	SAMN31321380	Homo sapiens	972	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
28	GCA_028203735.1	Bifidobacterium bifidum	F6_h1001283B150217_200217	SAMN31321377	Homo sapiens	972	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
29	GCA_028203745.1	Bifidobacterium bifidum	G8_h1001283B150217_200217	SAMN31321379	Homo sapiens	972	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
30	GCA_028203795.1	Bifidobacterium bifidum	C4_h1001283B150217_200217	SAMN31321375	Homo sapiens	972	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
31	GCA_028202555.1	Bifidobacterium bifidum	B6_h1001283B150217_200217	SAMN31321373	Homo sapiens	973	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
32	GCA_028202395.1	Bifidobacterium bifidum	J1101312st1_E10_J1101312_190322	SAMN31321382	Homo sapiens	980	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
33	GCA_028202415.1	Bifidobacterium bifidum	J1101312st1_C7_J1101312_190322	SAMN31321381	Homo sapiens	980	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
34	GCA_028203675.1	Bifidobacterium bifidum	J1101312st1_H2_J1101312_190322	SAMN31321384	Homo sapiens	980	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
35	GCA_028203695.1	Bifidobacterium bifidum	J1101312st1_E3_J1101312_190322	SAMN31321383	Homo sapiens	980	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
36	GCA_002076105.1	Bifidobacterium bifidum	1887B	SAMN06621707	Homo sapiens	985	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
37	GCA_028202855.1	Bifidobacterium bifidum	1001136st1_C1_1001136B_160425	SAMN31321326	Homo sapiens	1023	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
38	GCA_900112465.1	Bifidobacterium bifidum	Calf96	SAMN05216254	-	1024	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
39	GCA_001405355.1	Bifidobacterium bifidum	2789STDY5608877	SAMEA3545285	Homo sapiens	1025	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
40	GCA_000155395.1	Bifidobacterium bifidum NCIMB 41171	NCIMB 41171	SAMN02463676	Homo sapiens	1027	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
41	GCA_001020405.1	Bifidobacterium bifidum	IPLA 20015	SAMN03103719	Homo sapiens	1028	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
42	GCA_028202055.1	Bifidobacterium bifidum	D31st1_E7_D31t1_170403	SAMN31321363	Homo sapiens	1028	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
43	GCA_028202075.1	Bifidobacterium bifidum	D31st1_A3_D31t1_170403	SAMN31321361	Homo sapiens	1028	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
44	GCA_028202095.1	Bifidobacterium bifidum	D31st1_B4_D31t1_170403	SAMN31321362	Homo sapiens	1028	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
45	GCA_039913135.1	Bifidobacterium bifidum	RTP21221st1_H4_RTP21221_200709	SAMN31321407	Homo sapiens	1029	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
46	GCA_016307165.1	Bifidobacterium bifidum	UBBB-55	SAMN16793263	Homo sapiens	1031	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
47	GCA_028203535.1	Bifidobacterium bifidum	RTP21221st1_G2_RTP21221_200709	SAMN31321406	Homo sapiens	1031	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
48	GCA_001025135.1	Bifidobacterium bifidum ATCC 29521 = JCM 1255 = DSM 20456	-	SAMD00061040	-	1032	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
49	GCA_013867495.1	Bifidobacterium bifidum	s-1	SAMN15579835	-	1032	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
50	GCA_900637095.1	Bifidobacterium bifidum	NCTC13001	SAMEA4063017	-	1032	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
51	GCA_000466525.1	Bifidobacterium bifidum ATCC 29521 = JCM 1255 = DSM 20456	ATCC 29521	SAMN02436821	Homo sapiens	1033	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
52	GCA_017814645.1	Bifidobacterium bifidum	BB-G90	SAMN18436315	Homo sapiens	1033	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
53	GCA_028203495.1	Bifidobacterium bifidum	RTP21484st2_A9_RTP21484_190118	SAMN31321414	Homo sapiens	1033	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
54	GCA_028368265.1	Bifidobacterium bifidum	RTP21484st2_G9_RTP21484_190118	SAMN31321246	Homo sapiens	1033	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
55	GCA_000741085.1	Bifidobacterium bifidum	LMG 11041	SAMN02673426	Homo sapiens	1034	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
56	GCA_011029205.1	Bifidobacterium bifidum	VA07-1AN	SAMN14087237	Homo sapiens	1034	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
57	GCA_039913115.1	Bifidobacterium bifidum	RTP21221st1_H7_RTP21221_200709	SAMN31321408	Homo sapiens	1034	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
58	GCA_003437945.1	Bifidobacterium bifidum	TF05-1	SAMN09736871	Homo sapiens	1035	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
59	GCA_009078055.1	Bifidobacterium bifidum	BIOML-A11	SAMN11944601	Homo sapiens	1035	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
60	GCA_009159095.1	Bifidobacterium bifidum	BIOML-A21	SAMN11944611	Homo sapiens	1035	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
61	GCA_009160885.1	Bifidobacterium bifidum	BIOML-A14	SAMN11944604	Homo sapiens	1035	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
62	GCA_009160915.1	Bifidobacterium bifidum	BIOML-A15	SAMN11944605	Homo sapiens	1035	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
63	GCA_028202115.1	Bifidobacterium bifidum	BSD2780061688st1_G1_BSD2780061688b_171218	SAMN31321360	Homo sapiens	1035	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
64	GCA_028202185.1	Bifidobacterium bifidum	BSD2780061688st1_D1_BSD2780061688b_171218	SAMN31321359	Homo sapiens	1035	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
65	GCA_028202425.1	Bifidobacterium bifidum	A4_hBSD2780061687b_210117	SAMN31321396	Homo sapiens	1035	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
66	GCA_028202435.1	Bifidobacterium bifidum	F3_hBSD2780061687b_210117	SAMN31321402	Homo sapiens	1035	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
67	GCA_039913075.1	Bifidobacterium bifidum	RTP21222st1_F4_RTP21222_200807	SAMN31321410	Homo sapiens	1035	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
68	GCA_039913155.1	Bifidobacterium bifidum	F6_hBSD2780061687b_210117	SAMN31321403	Homo sapiens	1035	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
69	GCA_039913235.1	Bifidobacterium bifidum	B7_hBSD2780061687b_210117	SAMN31321398	Homo sapiens	1035	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
70	GCA_040094955.1	Bifidobacterium bifidum	CLA-AA-H198	SAMN40631356	Homo sapiens	1035	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
71	GCA_009159495.1	Bifidobacterium bifidum	BIOML-A24	SAMN11944614	Homo sapiens	1036	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
72	GCA_009159505.1	Bifidobacterium bifidum	BIOML-A20	SAMN11944610	Homo sapiens	1036	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
73	GCA_009159555.1	Bifidobacterium bifidum	BIOML-A19	SAMN11944609	Homo sapiens	1036	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
74	GCA_009160825.1	Bifidobacterium bifidum	BIOML-A25	SAMN11944615	Homo sapiens	1036	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
75	GCA_009160905.1	Bifidobacterium bifidum	BIOML-A12	SAMN11944602	Homo sapiens	1036	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
76	GCA_028202455.1	Bifidobacterium bifidum	H2_hBSD2780061687b_210117	SAMN31321404	Homo sapiens	1036	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
77	GCA_028202535.1	Bifidobacterium bifidum	E4_hBSD2780061687b_210117	SAMN31321400	Homo sapiens	1036	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
78	GCA_028203515.1	Bifidobacterium bifidum	A2_hBSD2780061687b_210117	SAMN31321395	Homo sapiens	1036	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
79	GCA_028203545.1	Bifidobacterium bifidum	B3_hBSD2780061687b_210117	SAMN31321397	Homo sapiens	1036	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
80	GCA_046763285.1	Bifidobacterium bifidum	LHP007	SAMN46218889	Homo sapiens	1036	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
81	GCA_003466365.1	Bifidobacterium bifidum	TM06-5	SAMN09736996	Homo sapiens	1037	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
82	GCA_003466395.1	Bifidobacterium bifidum	TM06-10	SAMN09736987	Homo sapiens	1037	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
83	GCA_009078115.1	Bifidobacterium bifidum	BIOML-A10	SAMN11944600	Homo sapiens	1037	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
84	GCA_009160945.1	Bifidobacterium bifidum	BIOML-A13	SAMN11944603	Homo sapiens	1037	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
85	GCA_039913055.1	Bifidobacterium bifidum	RTP21222st1_F7_RTP21222_200807	SAMN31321411	Homo sapiens	1037	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
86	GCA_009160845.1	Bifidobacterium bifidum	BIOML-A17	SAMN11944607	Homo sapiens	1038	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
87	GCA_028202015.1	Bifidobacterium bifidum	D52st1_E11_D52t1_170925	SAMN31321364	Homo sapiens	1038	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
88	GCA_028202515.1	Bifidobacterium bifidum	F11_hBSD2780061687b_210117	SAMN31321401	Homo sapiens	1038	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
89	GCA_039912995.1	Bifidobacterium bifidum	RTP21222st1_H10_RTP21222_200807	SAMN31321412	Homo sapiens	1038	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
90	GCA_039913095.1	Bifidobacterium bifidum	RTP21222st1_D12_RTP21222_200807	SAMN31321409	Homo sapiens	1038	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
91	GCA_045635495.1	Bifidobacterium bifidum	CGMCC No.29545	SAMN44616490	Homo sapiens	1038	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
92	GCA_049204775.1	Bifidobacterium bifidum	IATA148	SAMN45053989	Homo sapiens	1038	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
93	GCA_017894325.1	Bifidobacterium bifidum	CNCM I-4319	SAMN15324980	Homo sapiens	1040	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
94	GCA_039913175.1	Bifidobacterium bifidum	RTP21221st1_A9_RTP21221_200709	SAMN31321405	Homo sapiens	1041	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
95	GCA_000265095.1	Bifidobacterium bifidum BGN4	BGN4	SAMN02603486	Homo sapiens	1042	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
96	GCA_003437175.1	Bifidobacterium bifidum	TF07-22	SAMN09736904	Homo sapiens	1042	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
97	GCA_039913015.1	Bifidobacterium bifidum	RTP31036st1_A12_RTP31036_200814	SAMN31321415	Homo sapiens	1042	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
98	GCA_039913035.1	Bifidobacterium bifidum	RTP31036st1_G6_RTP31036_200814	SAMN31321416	Homo sapiens	1043	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
99	GCA_000300215.1	Bifidobacterium bifidum IPLA 20015	IPLA 20015	SAMN02470078	Homo sapiens	1044	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
100	GCA_002469385.1	Bifidobacterium bifidum	1 G1971	SAMN06759457	Homo sapiens	1044	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score

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