Search results for phylogenetically related strains

 

Rank Compare Genome ID Species Strain BioSample ID Host Allelic distance ARGs VFs PGs PPRS
1GCA_034478365.1Lactiplantibacillus plantarumS034-52w-2SAMN38650131Homo sapiens0
2GCA_034422915.1Lactiplantibacillus plantarumYW2189SAMN38636266Homo sapiens51
3GCA_023108905.1Lactiplantibacillus plantarumM4L1SAMN26138624-164
4GCA_044731905.1Lactiplantibacillus plantarumDSM 12028SAMN41278858-462
5GCA_022558425.1Lactiplantibacillus plantarumSTSAMN24424940-472
6GCA_001639595.1Lactiplantibacillus plantarumNizo2263SAMN04525976-597
7GCA_031877725.1Lactiplantibacillus plantarumSYBC-SM3SAMN35789079-597
8GCA_001672035.1Lactiplantibacillus plantarumNCU116SAMN05162259-601
9GCA_002173655.1Lactiplantibacillus plantarumSRCM102022SAMN07125944-602
10GCA_004055415.1Lactiplantibacillus plantarumSRCM 103305SAMN10738671-617
11GCA_001651845.1Lactiplantibacillus plantarumNizo1837SAMN04510483Homo sapiens619
12GCA_009889775.1Lactiplantibacillus plantarumLpRasSAMN05645852-619
13GCA_020881935.1Lactiplantibacillus plantarumZW5SAMN22871635-619
14GCA_027854125.1Lactiplantibacillus plantarumHH-LP56SAMN32599285-619
15GCA_029854235.1Lactiplantibacillus plantarumMA2SAMN34153834-619
16GCA_031461015.1Lactiplantibacillus plantarumKCKM 0594SAMN37256206-619
17GCA_036330065.1Lactiplantibacillus plantarum subsp. plantarumGBCC-GR003SAMN39614441Homo sapiens619
18GCA_039938975.1Lactiplantibacillus plantarumLS 4-4SAMN41451970Homo sapiens619
19GCA_041679785.1Lactiplantibacillus plantarumDo4_IMSAMN41163062Homo sapiens619
20GCA_022810685.1Lactiplantibacillus plantarumSCB0151SAMN22106488Kefir grain620
21GCA_040745055.1Lactiplantibacillus plantarumCMTB-TF1SAMN42358598Tremella fuciformis620
22GCA_001617525.2Lactiplantibacillus plantarumCAUH2SAMN04549363-621
23GCA_001639565.1Lactiplantibacillus plantarumNizo2260SAMN04525974Homo sapiens621
24GCA_036321505.1Lactiplantibacillus plantarumCGMCC 14177SAMN39555870-621
25GCA_001540965.1Lactiplantibacillus plantarumLp1612SAMN03702585bovine622
26GCA_002024845.1Lactiplantibacillus plantarumCLP0611SAMN06240352-622
27GCA_002914965.1Lactiplantibacillus plantarumBP06SAMN07187784-622
28GCA_003023825.1Lactiplantibacillus plantarumJDARSHSAMN08741665-622
29GCA_003053035.1Lactiplantibacillus plantarumDS18_9SAMN06464105Homo sapiens622
30GCA_003053045.1Lactiplantibacillus plantarumDS23_9SAMN06464107Homo sapiens622
31GCA_003061725.1Lactiplantibacillus plantarumDS6_9SAMN05726897Homo sapiens622
32GCA_003061765.1Lactiplantibacillus plantarumDS14_9SAMN05726895Homo sapiens622
33GCA_003061785.1Lactiplantibacillus plantarumDS9_9SAMN05726899Homo sapiens622
34GCA_003061805.1Lactiplantibacillus plantarumDS11_9SAMN05726893Homo sapiens622
35GCA_003143915.1Lactiplantibacillus plantarumHAC01SAMN09087848-622
36GCA_003586485.1Lactiplantibacillus plantarumDR7SAMN09721150Bos taurus622
37GCA_003597595.1Lactiplantibacillus plantarumATG-K6SAMN10094369-622
38GCA_003597615.1Lactiplantibacillus plantarumATG-K8SAMN10094466-622
39GCA_006364975.1Lactiplantibacillus plantarumNTTN08SAMN11952115Homo sapiens622
40GCA_013256965.1Lactiplantibacillus plantarum subsp. plantarumG1SAMN14979736-622
41GCA_017580935.1Lactiplantibacillus plantarumEL11SAMN13735608-622
42GCA_021279005.2Lactiplantibacillus plantarum022AESAMN09662691-622
43GCA_025212155.1Lactiplantibacillus plantarumCIRM-BIA 2224SAMN10365325-622
44GCA_026183415.1Lactiplantibacillus plantarumBRD_L15SAMN31580342Canis lupus familiaris dachshund622
45GCA_026275505.1Lactiplantibacillus plantarumV1SAMN31726903cow622
46GCA_028323145.1Lactiplantibacillus plantarum1001274st1_G7_1001274B_151102SAMN31322645Homo sapiens622
47GCA_028323205.1Lactiplantibacillus plantarum1001274st1_B5_1001274B_151102SAMN31322644Homo sapiens622
48GCA_030464485.1Lactiplantibacillus plantarumFCQNA32M4SAMN12027236Homo sapiens622
49GCA_037966755.1Lactiplantibacillus plantarumATA-LTC-Lp230198SAMN40643420-622
50GCA_039838505.1Lactiplantibacillus plantarum1001287st2_C3_1001287B_170213SAMN31322647Homo sapiens622
51GCA_040785175.1Lactiplantibacillus plantarumgbc_dSAMN41082099-622
52GCA_040785225.1Lactiplantibacillus plantarumgbc_CSAMN41082098-622
53GCA_040790905.1Lactiplantibacillus plantarumAUSA004SAMN41916868-622
54GCA_040822595.1Lactiplantibacillus plantarumATA-LPC98052SAMN41784237-622
55GCA_040883545.1Lactiplantibacillus plantarumAM-LP-81SAMN42007028-622
56GCA_042691645.1Lactiplantibacillus plantarumLP01SAMN43919990-622
57GCA_045348195.1Lactiplantibacillus plantarumTCI999SAMN40716503-622
58GCA_045528025.1Lactiplantibacillus plantarumFAM 25263SAMN43257761-622
59GCA_046109905.1Lactiplantibacillus plantarumTCI227SAMN40890045-622
60GCA_047495545.1Lactiplantibacillus plantarumOBM7SAMN46400537-622
61GCA_047649195.1Lactiplantibacillus plantarumV2SAMN46400503-622
62GCA_048657025.1Lactiplantibacillus plantarumRAL-4SAMN46169820-622
63GCA_003344845.1Lactiplantibacillus plantarumCGMCC12436SAMN09699166-623
64GCA_004025165.1Lactiplantibacillus plantarumSKT109SAMN10721184-623
65GCA_004123095.1Lactiplantibacillus plantarumXZ3303SAMN10782618-623
66GCA_007833595.1Lactiplantibacillus plantarumY44SAMN09487401-623
67GCA_023207995.1Lactiplantibacillus plantarumLP-F1SAMN14572866-623
68GCA_038039495.1Lactiplantibacillus plantarumplantIISAMN40560998activated sludge623
69GCA_038743365.1Lactiplantibacillus plantarumHOM2217SAMN41038019-623
70GCA_039414055.1Lactiplantibacillus plantarumKA9MASAMN41086562-623
71GCA_040084715.1Lactiplantibacillus plantarumBGI-N6SAMN41398132Homo sapiens623
72GCA_044590115.1Lactiplantibacillus plantarumNMGL2SAMN44480978Food sample623
73GCA_000148815.2Lactiplantibacillus plantarum ST-IIIST-IIISAMN02603896-624
74GCA_017301935.1Lactiplantibacillus plantarum12SAMN13495976Scophthalmus maximus624
75GCA_018588615.2Lactiplantibacillus plantarum subsp. plantarumM17SAMN17313503-624
76GCA_018588665.2Lactiplantibacillus plantarum subsp. plantarumM8SAMN17313476-624
77GCA_025723165.1Lactiplantibacillus plantarumBF_15SAMN23674217-624
78GCA_003966855.1Lactiplantibacillus plantarum-SAMD00097254-625
79GCA_009756965.1Lactiplantibacillus plantarumBK-022SAMN11655668-625
80GCA_039954855.1Lactiplantibacillus plantarumAHQ-14SAMN41274413-625
81GCA_044129425.1Lactiplantibacillus plantarumLVS14SAMN37186726-625
82GCA_001272315.2Lactiplantibacillus plantarum subsp. plantarumCGMCC 1.557SAMN03976562-626
83GCA_008868495.1Lactiplantibacillus plantarumBIO1096SAMN12856541-627
84GCA_030464565.1Lactiplantibacillus plantarumVJLHD12L4SAMN12027231-628
85GCA_001436855.1Lactiplantibacillus plantarumDSM 13273SAMN02797770-629
86GCA_003589725.1Lactiplantibacillus plantarumZFM55SAMN07305427Homo sapiens629
87GCA_003627335.1Lactiplantibacillus plantarumZFM9SAMN07303085Homo sapiens629
88GCA_049188355.1Lactiplantibacillus plantarumCQ01-107SAMN46797118-629
89GCA_001484005.1Lactiplantibacillus plantarumLZ95SAMN03854682Homo sapiens630
90GCA_034333585.1Lactiplantibacillus plantarumcqf-43SAMN37720970sow feces630
91GCA_001619265.1Lactiplantibacillus plantarumFBR5SAMN04382578-631
92GCA_009889735.1Lactiplantibacillus plantarumLp835SAMN05645850-631
93GCA_009889825.1Lactiplantibacillus plantarumLp823SAMN05645849-631
94GCA_009889835.1Lactiplantibacillus plantarumLp546SAMN05645846-631
95GCA_009889865.1Lactiplantibacillus plantarumLp821SAMN05645848-631
96GCA_009889885.1Lactiplantibacillus plantarumLp543SAMN05645845-631
97GCA_009889895.1Lactiplantibacillus plantarumLp542SAMN05645844-631
98GCA_009889925.1Lactiplantibacillus plantarumLp533SAMN05645842-631
99GCA_009889935.1Lactiplantibacillus plantarumLp541SAMN05645843-631
100GCA_009889965.1Lactiplantibacillus plantarumLp520SAMN05645841-631