Search results for phylogenetically related strains

 

Rank Compare Genome ID Species Strain BioSample ID Host Allelic distance ARGs VFs PGs PPRS
1GCA_036762785.1Lacticaseibacillus paracasei1571-2_IL3211SAMN37904772animal0
2GCA_036762765.1Lacticaseibacillus paracasei1567_IL3212SAMN37904769animal2
3GCA_000410175.1Lacticaseibacillus paracasei subsp. paracasei Lpp225Lpp225SAMN02469715-148
4GCA_047785155.1Lacticaseibacillus paracaseiSRCM212209SAMN46082883-148
5GCA_044740695.1Lacticaseibacillus paracaseiE11.5SAMN44487087-150
6GCA_025137495.1Lacticaseibacillus paracaseiL1SAMN20355457-155
7GCA_018729425.1Lacticaseibacillus paracaseiMYD3SAMN16551136-198
8GCA_015476155.1Lacticaseibacillus paracasei subsp. toleransMGB0625SAMN16668564-203
9GCA_040822445.1Lacticaseibacillus paracasei subsp. paracaseiBS2-PB5SAMN42029631Homo sapiens213
10GCA_028878315.1Lacticaseibacillus paracaseiDSM 4905SAMN23708196Homo sapiens214
11GCA_018257175.1Lacticaseibacillus paracaseiDm-2019-60SAMN17146146Drosophila melanogaster219
12GCA_025190685.1Lacticaseibacillus paracaseiCIRM-BIA 1445SAMN10365442-222
13GCA_015476075.1Lacticaseibacillus paracasei subsp. toleransMGB0245SAMN16657550-224
14GCA_031348425.1Lacticaseibacillus paracaseiKCKM 0245SAMN37235621-224
15GCA_031461095.1Lacticaseibacillus paracaseiKCKM 0992SAMN37256209-225
16GCA_033815995.1Lacticaseibacillus paracaseiYE01SAMN37887709-234
17GCA_021650835.1Lacticaseibacillus paracasei subsp. paracaseiGR0562SAMN25145123Homo sapiens267
18GCA_034555135.1Lacticaseibacillus paracaseiBF3SAMN38857134Brachionus plicatilis319
19GCA_039615445.1Lacticaseibacillus paracaseiNKM 5.4SAMN41068727-327
20GCA_000410115.1Lacticaseibacillus paracasei subsp. paracasei Lpp48Lpp48SAMN02641496-402
21GCA_025215665.1Lacticaseibacillus paracaseiALAC-4SAMN10688387-439
22GCA_025190665.1Lacticaseibacillus paracaseiCIRM-BIA 655SAMN10365443-445
23GCA_000309605.1Lacticaseibacillus paracasei32GSAMN02472010-456
24GCA_000410135.1Lacticaseibacillus paracasei subsp. paracasei Lpp17Lpp17SAMN02469707-463
25GCA_003712835.1Lacticaseibacillus paracaseiFAM8407SAMN04088897-539
26GCA_000410095.1Lacticaseibacillus paracasei subsp. paracasei CNCM I-2877CNCM I-2877SAMN02641492-540
27GCA_015319235.1Lacticaseibacillus paracasei subsp. toleransMGB0543SAMN16657553-563
28GCA_004078565.1Lacticaseibacillus paracaseiSRCM103424SAMN10743383-566
29GCA_034044075.1Lacticaseibacillus paracaseiMP11ASAMN37950489-600
30GCA_034555155.1Lacticaseibacillus paracaseiRT4SAMN38857191Brachionus plicatilis610
31GCA_018917305.1Lacticaseibacillus paracaseiN53SAMN19374054Macaca fascicularis611
32GCA_003712755.1Lacticaseibacillus paracaseiFAM3257SAMN04088888-612
33GCA_005864195.1Lacticaseibacillus paracaseiFAM 3257SAMN11653942-612
34GCA_003712825.1Lacticaseibacillus paracaseiFAM8374SAMN04088896-615
35GCA_002901165.3Lacticaseibacillus paracasei subsp. paracaseiNTU 101SAMN07445234Homo sapiens616
36GCA_003712225.1Lacticaseibacillus paracaseiFAM10859SAMN04088858-616
37GCA_022588775.1Lacticaseibacillus paracaseiBCRC-16100SAMN22548461Homo sapiens616
38GCA_023656965.1Lacticaseibacillus paracaseiATCC 27092SAMN11309554Homo sapiens616
39GCA_024717335.1Lacticaseibacillus paracaseiVHProbi M56SAMN27162336Homo sapiens616
40GCA_025190485.1Lacticaseibacillus paracaseiCIRM-BIA 1869SAMN10365453-616
41GCA_025190495.1Lacticaseibacillus paracaseiCIRM-BIA 288SAMN10365452-616
42GCA_025190545.1Lacticaseibacillus paracaseiCIRM-BIA 2129SAMN10365447-616
43GCA_028609725.1Lacticaseibacillus paracaseiCLP-C10SAMN14677579-616
44GCA_040459635.1Lacticaseibacillus paracaseiT0602SAMN31372287-616
45GCA_040459685.1Lacticaseibacillus paracaseiT0601SAMN31372286-616
46GCA_046939035.1Lacticaseibacillus paracasei subsp. paracaseiM587ASAMN35847929wild boar616
47GCA_003712785.1Lacticaseibacillus paracaseiFAM6161SAMN04088891-617
48GCA_003713005.1Lacticaseibacillus paracaseiFAM7821SAMN04088894-617
49GCA_012241605.1Lacticaseibacillus paracaseiDTA81SAMN14517101Homo sapiens617
50GCA_030061895.1Lacticaseibacillus paracaseiGM-080SAMN27485237Homo sapiens617
51GCA_037966745.1Lacticaseibacillus paracaseiATA-LTC-Lp040802SAMN40643417Homo sapiens617
52GCA_000026485.1Lacticaseibacillus paracaseiBL23SAMEA2272724-618
53GCA_002813615.1Lacticaseibacillus paracasei subsp. paracaseiTMW 1.1434SAMN05356834-618
54GCA_015476135.1Lacticaseibacillus paracasei subsp. toleransMGB0734SAMN16667758-618
55GCA_029906315.1Lacticaseibacillus paracasei subsp. paracaseiMI29SAMN34105739Homo sapiens618
56GCA_030361365.1Lacticaseibacillus paracaseiTOM.9SAMN35776875-618
57GCA_038025045.1Lacticaseibacillus paracaseiATA-LTC-Lp121000SAMN40643419animal618
58GCA_965138865.1Lacticaseibacillus paracaseiCIP109805SAMEA117660480-618
59GCA_002079285.1Lacticaseibacillus paracaseiIIASAMN04571918-619
60GCA_009739485.1Lacticaseibacillus paracasei subsp. paracaseiIBB3423SAMN07167770-619
61GCA_012932835.1Lacticaseibacillus paracaseiCRF28SAMN05660651-619
62GCA_040430295.1Lacticaseibacillus paracaseiATA-LTC-Lp041103SAMN41784243Animal619
63GCA_002849575.1Lacticaseibacillus paracaseiDUP 13076SAMN08239980-620
64GCA_003712645.1Lacticaseibacillus paracaseiFAM22276SAMN04088881-620
65GCA_003712795.1Lacticaseibacillus paracaseiFAM4067SAMN04088889-620
66GCA_003712935.1Lacticaseibacillus paracaseiFAM3248SAMN04088887-620
67GCA_025211235.1Lacticaseibacillus paracasei1017SAMN10365678-620
68GCA_000410475.1Lacticaseibacillus paracasei subsp. paracasei Lpp125Lpp125SAMN02641495-621
69GCA_000194765.1Lacticaseibacillus paracaseiBD-IISAMN02603876-622
70GCA_000409815.1Lacticaseibacillus paracasei subsp. paracasei Lpp230Lpp230SAMN02469722Homo sapiens622
71GCA_000409995.1Lacticaseibacillus paracasei subsp. paracasei Lpp228Lpp228SAMN02469720Homo sapiens622
72GCA_000410415.1Lacticaseibacillus paracasei subsp. paracasei Lpp37Lpp37SAMN02469718Homo sapiens622
73GCA_000958485.1Lacticaseibacillus paracasei NRIC 1981-SAMD00000558-622
74GCA_001895185.1Lacticaseibacillus paracasei-SAMD00029052-622
75GCA_016890245.1Lacticaseibacillus paracaseiYT170SAMN17818118Rex rabbit622
76GCA_022478075.1Lacticaseibacillus paracaseiVHProbi F22SAMN23765140-622
77GCA_024665815.1Lacticaseibacillus paracasei subsp. paracasei01SAMN29862210Homo sapiens622
78GCA_024999945.1Lacticaseibacillus paracasei88SAMN10365669-622
79GCA_025190575.1Lacticaseibacillus paracaseiCIRM-BIA 770SAMN10365448-622
80GCA_025190635.1Lacticaseibacillus paracaseiCIRM-BIA 1444SAMN10365444-622
81GCA_025190705.1Lacticaseibacillus paracaseiCIRM-BIA 2130SAMN10365441-622
82GCA_000409955.1Lacticaseibacillus paracasei subsp. paracasei Lpp223Lpp223SAMN02469706Homo sapiens623
83GCA_012932815.1Lacticaseibacillus paracaseiUW1SAMN05660434-623
84GCA_022614635.1Lacticaseibacillus paracaseiGMNL-855SAMN22548462Homo sapiens623
85GCA_032290425.1Lacticaseibacillus paracaseiASM82903v1SAMN37553482Homo sapiens623
86GCA_000309645.1Lacticaseibacillus paracaseiCRF28SAMN02472005Homo sapiens624
87GCA_000309765.1Lacticaseibacillus paracaseiLc-10SAMN02472012-624
88GCA_000410295.1Lacticaseibacillus paracasei subsp. paracasei Lpp189Lpp189SAMN02469702-624
89GCA_011031945.1Lacticaseibacillus paracaseiVA02-1ANSAMN14087235Homo sapiens624
90GCA_025660485.1Lacticaseibacillus paracaseiPB5SAMN31096048-624
91GCA_028320445.1Lacticaseibacillus paracasei1001095st2_H2_1025SCRN_200924SAMN31322629Homo sapiens624
92GCA_028321445.1Lacticaseibacillus paracasei1001095st2_D7_1025SCRN_200924SAMN31322627Homo sapiens624
93GCA_039650495.1Lacticaseibacillus paracaseiDDS12SAMN41053268-624
94GCA_042657205.1Lacticaseibacillus paracaseiL45SAMN43851867Human (Breastfed infant)624
95GCA_000194785.1Lacticaseibacillus paracaseiLC2WSAMN02603877-625
96GCA_002914885.1Lacticaseibacillus paracaseiBP07SAMN07187783-625
97GCA_007292115.1Lacticaseibacillus paracaseiCBA3611SAMN11890849Homo sapiens625
98GCA_025631055.1Lacticaseibacillus paracaseiPB6SAMN31096049-625
99GCA_025757505.1Lacticaseibacillus paracaseiNG-LCU-ST2SAMN31037893Maize625
100GCA_028878155.1Lacticaseibacillus paracaseiDIALYacSAMN23708207-625