Search results for phylogenetically related strains

 

Rank Compare Genome ID Species Strain BioSample ID Host Allelic distance ARGs VFs PGs PPRS
1GCA_041679805.1Lacticaseibacillus paracaseiAPYSAMN41163063Homo sapiens0
2GCA_026967245.1Lacticaseibacillus paracaseiLpc_yogurt_B6SAMN32062179-1
3GCA_009996805.1Lacticaseibacillus paracaseiD3-5SAMN13905290Homo sapiens4
4GCA_026967195.1Lacticaseibacillus paracaseiLpc_yogurt_B5SAMN32062178-4
5GCA_026967205.1Lacticaseibacillus paracaseiLpc_yogurt_B4SAMN32062177-4
6GCA_026967275.1Lacticaseibacillus paracaseiLpc_yogurt_B3SAMN32062176-4
7GCA_026967295.1Lacticaseibacillus paracaseiLpc_yogurt_B2SAMN32062175-4
8GCA_003712965.1Lacticaseibacillus paracaseiFAM6410SAMN04088893-84
9GCA_025190565.1Lacticaseibacillus paracaseiCIRM-BIA 2128SAMN10365446-113
10GCA_037414215.1Lacticaseibacillus paracaseiLPC100SAMN39212581Homo sapiens113
11GCA_041117985.1Lacticaseibacillus paracaseiMYA5SAMN42930119-210
12GCA_004141835.1Lacticaseibacillus paracaseiSRCM103299SAMN10849469-236
13GCA_003712565.1Lacticaseibacillus paracaseiFAM19317SAMN04088878-250
14GCA_003712985.1Lacticaseibacillus paracaseiFAM8140SAMN04088895-252
15GCA_026797475.1Lacticaseibacillus paracaseiCBP-1042SAMN27675067-252
16GCA_028878305.1Lacticaseibacillus paracaseiNRRL B-456SAMN23708197-253
17GCA_016887785.1Lacticaseibacillus paracasei2306SAMN17562096-254
18GCA_025190725.1Lacticaseibacillus paracaseiCIRM-BIA 699SAMN10365439-254
19GCA_037283385.1Lacticaseibacillus paracaseiNRC_P4SAMN32629231cow255
20GCA_002148805.1Lacticaseibacillus paracaseiDPC4206SAMN06220137-265
21GCA_002148885.1Lacticaseibacillus paracaseiDPC4536SAMN06463780-265
22GCA_016757695.1Lacticaseibacillus paracasei subsp. toleransS-NBSAMN17359333-265
23GCA_024498315.1Lacticaseibacillus paracaseiSMN-LBKSAMN29933592-265
24GCA_024622515.1Lacticaseibacillus paracaseiDSM 28675SAMN29593134Mus musculus265
25GCA_028320385.1Lacticaseibacillus paracasei1001270st1_F8_1001270H_150608SAMN31322638Homo sapiens265
26GCA_035586595.1Lacticaseibacillus paracaseiHP-B1337SAMN38922877-265
27GCA_036281375.1Lacticaseibacillus paracaseiCUL07ASAMN09708453-265
28GCA_040785095.1Lacticaseibacillus paracaseigbc_fSAMN41082101-265
29GCA_045808845.1Lacticaseibacillus paracaseiMSR2SAMN45146297-265
30GCA_049191845.1Lacticaseibacillus paracaseiIATA110SAMN45053973Homo sapiens265
31GCA_049205075.1Lacticaseibacillus paracaseiIATA109SAMN45053972Homo sapiens265
32GCA_000309785.1Lacticaseibacillus paracaseiLpc-37SAMN02472013-266
33GCA_003434205.1Lacticaseibacillus paracaseiAM33-2ACSAMN09736452Homo sapiens266
34GCA_016757675.1Lacticaseibacillus paracasei subsp. toleransS-NA5SAMN17359331-266
35GCA_041283745.2Lacticaseibacillus paracaseiORD 0998SAMN43000418Homo sapiens266
36GCA_048282615.1Lacticaseibacillus paracasei439SAMN46889214-266
37GCA_030710015.1Lacticaseibacillus paracaseiULE721SAMN33593465-267
38GCA_000410235.1Lacticaseibacillus paracasei subsp. paracasei Lpp74Lpp74SAMN02469728-281
39GCA_000410195.1Lacticaseibacillus paracasei subsp. paracasei Lpp219Lpp219SAMN02469710Homo sapiens284
40GCA_000309665.1Lacticaseibacillus paracaseiM36SAMN02472000-286
41GCA_049201625.1Lacticaseibacillus paracaseiUBLPc-87SAMN47217620-287
42GCA_025190525.1Lacticaseibacillus paracaseiCIRM-BIA 1517SAMN10365450-306
43GCA_015693945.1Lacticaseibacillus paracasei subsp. toleransZY-1SAMN16861159-325
44GCA_008369945.1Lacticaseibacillus paracaseiDTA93SAMN12661681Homo sapiens327
45GCA_016890245.1Lacticaseibacillus paracaseiYT170SAMN17818118Rex rabbit327
46GCA_019990865.1Lacticaseibacillus paracaseicek-R2SAMN21367938beet333
47GCA_000309685.1Lacticaseibacillus paracaseiT71499SAMN02472001Homo sapiens336
48GCA_036762895.1Lacticaseibacillus paracasei1311_IL3157SAMN37904766animal339
49GCA_000410055.1Lacticaseibacillus paracasei subsp. paracasei Lpp227Lpp227SAMN02641494Homo sapiens340
50GCA_030360845.1Lacticaseibacillus paracaseiTOM.1339SAMN35776905-340
51GCA_025757505.1Lacticaseibacillus paracaseiNG-LCU-ST2SAMN31037893Maize348
52GCA_042015765.1Lacticaseibacillus paracaseiZJUZ2-3SAMN43503360Homo sapiens354
53GCA_009931715.1Lacticaseibacillus paracaseiCACC 566SAMN13871807Canine355
54GCA_012955485.1Lacticaseibacillus paracasei347-16SAMN13259076Homo sapiens355
55GCA_028322945.1Lacticaseibacillus paracasei1001295st1_G5_1001295H_181012SAMN31322639Homo sapiens355
56GCA_029906365.1Lacticaseibacillus paracasei subsp. paracaseiMI3SAMN34106059Homo sapiens355
57GCA_003712245.1Lacticaseibacillus paracaseiFAM18108SAMN04088862-356
58GCA_024637915.1Lacticaseibacillus paracaseiVHProbi F11SAMN27160580Homo sapiens356
59GCA_037283365.1Lacticaseibacillus paracaseiNRC_P5SAMN32629232buffalo356
60GCA_037283435.1Lacticaseibacillus paracaseiNRC_P6SAMN32629233buffalo356
61GCA_037283545.1Lacticaseibacillus paracaseiNRC_P3SAMN32629230cow356
62GCA_008329845.1Lacticaseibacillus paracasei10266SAMN09874024Homo sapiens357
63GCA_015476175.1Lacticaseibacillus paracasei subsp. toleransMGB0747SAMN16668663-359
64GCA_002904305.1Lacticaseibacillus paracaseiCCC B1205SAMN03813856-360
65GCA_015476195.1Lacticaseibacillus paracasei subsp. toleransMGB0761SAMN16668817-360
66GCA_026013725.1Lacticaseibacillus paracaseiATG-E1SAMN31433209Hono sapiens362
67GCA_000410455.1Lacticaseibacillus paracasei subsp. paracasei Lpp43Lpp43SAMN02469725-367
68GCA_001244395.1Lacticaseibacillus paracaseiL9SAMN03853751Homo sapiens367
69GCA_017638905.1Lacticaseibacillus paracaseiHL182SAMN18236778Homo sapiens369
70GCA_013307125.1Lacticaseibacillus paracaseiLp02SAMN11489091Homo sapiens370
71GCA_030480425.1Lacticaseibacillus paracaseiL14SAMN33263285-372
72GCA_003966835.1Lacticaseibacillus paracasei-SAMD00094822-374
73GCA_007637635.1Lacticaseibacillus paracaseiNJSAMN12319598-377
74GCA_029625355.1Lacticaseibacillus paracaseiVHProbi OF10SAMN26144441-377
75GCA_003640765.1Lacticaseibacillus paracaseiUBLPC-35SAMN10147909-380
76GCA_028878105.1Lacticaseibacillus paracaseiTMW 1.300SAMN23708206-383
77GCA_036430865.1Lacticaseibacillus paracaseiFI11579SAMN33193087-391
78GCA_046939035.1Lacticaseibacillus paracasei subsp. paracaseiM587ASAMN35847929wild boar402
79GCA_034044075.1Lacticaseibacillus paracaseiMP11ASAMN37950489-413
80GCA_000410015.1Lacticaseibacillus paracasei subsp. paracasei Lpp221Lpp221SAMN02469717Homo sapiens419
81GCA_036431975.1Lacticaseibacillus paracaseiCMAN-SucSAMN35624267-419
82GCA_032229185.1Lacticaseibacillus paracaseiNC4SAMN37472141-452
83GCA_002079285.1Lacticaseibacillus paracaseiIIASAMN04571918-454
84GCA_036432035.1Lacticaseibacillus paracaseiLMAN-KhSAMN35624263-454
85GCA_025252385.1Lacticaseibacillus paracaseiVHProbi O44SAMN30550144Homo sapiens458
86GCA_000410075.1Lacticaseibacillus paracasei subsp. paracasei CNCM I-4648CNCM I-4648SAMN03177793-469
87GCA_002257625.1Lacticaseibacillus paracaseiTK1501SAMN05921089-472
88GCA_028609725.1Lacticaseibacillus paracaseiCLP-C10SAMN14677579-472
89GCA_003712785.1Lacticaseibacillus paracaseiFAM6161SAMN04088891-476
90GCA_003713005.1Lacticaseibacillus paracaseiFAM7821SAMN04088894-481
91GCA_012932835.1Lacticaseibacillus paracaseiCRF28SAMN05660651-482
92GCA_001895185.1Lacticaseibacillus paracasei-SAMD00029052-483
93GCA_030361365.1Lacticaseibacillus paracaseiTOM.9SAMN35776875-483
94GCA_012932815.1Lacticaseibacillus paracaseiUW1SAMN05660434-491
95GCA_000309645.1Lacticaseibacillus paracaseiCRF28SAMN02472005Homo sapiens494
96GCA_044990665.1Lacticaseibacillus paracaseiFNCPS K7SAMN44657157-494
97GCA_000410435.1Lacticaseibacillus paracasei subsp. paracasei CNCM I-4649CNCM I-4649SAMN02469704-495
98GCA_004078565.1Lacticaseibacillus paracaseiSRCM103424SAMN10743383-504
99GCA_015319235.1Lacticaseibacillus paracasei subsp. toleransMGB0543SAMN16657553-517
100GCA_025215665.1Lacticaseibacillus paracaseiALAC-4SAMN10688387-519