Search results for phylogenetically related strains

 

Rank Compare Genome ID Species Strain BioSample ID Host Allelic distance ARGs VFs PGs PPRS
1GCA_046352955.1Lactiplantibacillus plantarumLpR3P51-ShortReadAssemblySAMN40707856-0
2GCA_046352965.1Lactiplantibacillus plantarumLpWF-ShortReadAssemblySAMN40707855fly1
3GCA_046353005.1Lactiplantibacillus plantarumLpR3P51-LongReadAssemblySAMN40655002-2
4GCA_046353035.1Lactiplantibacillus plantarumLpWF-F9aSAMN40655005-2
5GCA_046353045.1Lactiplantibacillus plantarumLpWF-D11SAMN40655006-2
6GCA_046353105.1Lactiplantibacillus plantarumLpWF-LongReadAssemblySAMN40655001Drosophila melanogaster2
7GCA_018257215.1Lactiplantibacillus plantarumDm-2019-13SAMN17146147Drosophila melanogaster240
8GCA_046353025.1Lactiplantibacillus plantarumLpDm13SAMN40655003Drosophila melanogaster240
9GCA_022558425.1Lactiplantibacillus plantarumSTSAMN24424940-664
10GCA_023108905.1Lactiplantibacillus plantarumM4L1SAMN26138624-666
11GCA_044731905.1Lactiplantibacillus plantarumDSM 12028SAMN41278858-667
12GCA_036321505.1Lactiplantibacillus plantarumCGMCC 14177SAMN39555870-668
13GCA_001639595.1Lactiplantibacillus plantarumNizo2263SAMN04525976-669
14GCA_017580935.1Lactiplantibacillus plantarumEL11SAMN13735608-669
15GCA_030464565.1Lactiplantibacillus plantarumVJLHD12L4SAMN12027231-669
16GCA_031877725.1Lactiplantibacillus plantarumSYBC-SM3SAMN35789079-669
17GCA_001672035.1Lactiplantibacillus plantarumNCU116SAMN05162259-671
18GCA_037996145.1Lactiplantibacillus plantarumIFSAMN40663693-671
19GCA_001633575.1Lactiplantibacillus plantarumNizo2814SAMN04528840-672
20GCA_001639565.1Lactiplantibacillus plantarumNizo2260SAMN04525974Homo sapiens672
21GCA_001651845.1Lactiplantibacillus plantarumNizo1837SAMN04510483Homo sapiens672
22GCA_009889775.1Lactiplantibacillus plantarumLpRasSAMN05645852-672
23GCA_020881935.1Lactiplantibacillus plantarumZW5SAMN22871635-672
24GCA_027854125.1Lactiplantibacillus plantarumHH-LP56SAMN32599285-672
25GCA_029854235.1Lactiplantibacillus plantarumMA2SAMN34153834-672
26GCA_036330065.1Lactiplantibacillus plantarum subsp. plantarumGBCC-GR003SAMN39614441Homo sapiens672
27GCA_039938975.1Lactiplantibacillus plantarumLS 4-4SAMN41451970Homo sapiens672
28GCA_040745055.1Lactiplantibacillus plantarumCMTB-TF1SAMN42358598Tremella fuciformis672
29GCA_041679785.1Lactiplantibacillus plantarumDo4_IMSAMN41163062Homo sapiens672
30GCA_002173655.1Lactiplantibacillus plantarumSRCM102022SAMN07125944-673
31GCA_004025165.1Lactiplantibacillus plantarumSKT109SAMN10721184-673
32GCA_004123095.1Lactiplantibacillus plantarumXZ3303SAMN10782618-673
33GCA_013458335.1Lactiplantibacillus plantarumHC-2SAMN13555603Chaeturichthys stigmatias673
34GCA_018588615.2Lactiplantibacillus plantarum subsp. plantarumM17SAMN17313503-673
35GCA_018588665.2Lactiplantibacillus plantarum subsp. plantarumM8SAMN17313476-673
36GCA_030463605.1Lactiplantibacillus plantarumHC-2SAMN30247567fish673
37GCA_032818175.1Lactiplantibacillus plantarumEp-M17SAMN30403673-673
38GCA_039838505.1Lactiplantibacillus plantarum1001287st2_C3_1001287B_170213SAMN31322647Homo sapiens673
39GCA_041941405.1Lactiplantibacillus plantarumGBW-LP001SAMN43515873-673
40GCA_044590115.1Lactiplantibacillus plantarumNMGL2SAMN44480978Food sample673
41GCA_000148815.2Lactiplantibacillus plantarum ST-IIIST-IIISAMN02603896-674
42GCA_001436855.1Lactiplantibacillus plantarumDSM 13273SAMN02797770-674
43GCA_003344845.1Lactiplantibacillus plantarumCGMCC12436SAMN09699166-674
44GCA_007833595.1Lactiplantibacillus plantarumY44SAMN09487401-674
45GCA_017301935.1Lactiplantibacillus plantarum12SAMN13495976Scophthalmus maximus674
46GCA_020844665.1Lactiplantibacillus plantarumFUA3428SAMN21235229-674
47GCA_023207995.1Lactiplantibacillus plantarumLP-F1SAMN14572866-674
48GCA_025723165.1Lactiplantibacillus plantarumBF_15SAMN23674217-674
49GCA_026127775.1Lactiplantibacillus plantarumFUA3428SAMN21845660-674
50GCA_031461015.1Lactiplantibacillus plantarumKCKM 0594SAMN37256206-674
51GCA_038039495.1Lactiplantibacillus plantarumplantIISAMN40560998activated sludge674
52GCA_038743365.1Lactiplantibacillus plantarumHOM2217SAMN41038019-674
53GCA_039414055.1Lactiplantibacillus plantarumKA9MASAMN41086562-674
54GCA_040084715.1Lactiplantibacillus plantarumBGI-N6SAMN41398132Homo sapiens674
55GCA_001617525.2Lactiplantibacillus plantarumCAUH2SAMN04549363-675
56GCA_002370985.1Lactiplantibacillus plantarumLp510SAMN05645839-675
57GCA_009889735.1Lactiplantibacillus plantarumLp835SAMN05645850-675
58GCA_009889825.1Lactiplantibacillus plantarumLp823SAMN05645849-675
59GCA_009889835.1Lactiplantibacillus plantarumLp546SAMN05645846-675
60GCA_009889865.1Lactiplantibacillus plantarumLp821SAMN05645848-675
61GCA_009889885.1Lactiplantibacillus plantarumLp543SAMN05645845-675
62GCA_009889895.1Lactiplantibacillus plantarumLp542SAMN05645844-675
63GCA_009889925.1Lactiplantibacillus plantarumLp533SAMN05645842-675
64GCA_009889935.1Lactiplantibacillus plantarumLp541SAMN05645843-675
65GCA_009889965.1Lactiplantibacillus plantarumLp520SAMN05645841-675
66GCA_009890055.1Lactiplantibacillus plantarumLp305SAMN05645837-675
67GCA_039954855.1Lactiplantibacillus plantarumAHQ-14SAMN41274413-675
68GCA_002286275.1Lactiplantibacillus plantarumLP3SAMN05631073Homo sapiens676
69GCA_003966855.1Lactiplantibacillus plantarum-SAMD00097254-676
70GCA_008868495.1Lactiplantibacillus plantarumBIO1096SAMN12856541-676
71GCA_031432955.1Lactiplantibacillus plantarumKCKM 0112SAMN37235548-676
72GCA_001540965.1Lactiplantibacillus plantarumLp1612SAMN03702585bovine677
73GCA_002576835.1Lactiplantibacillus plantarumPC520SAMN07760023-677
74GCA_003627335.1Lactiplantibacillus plantarumZFM9SAMN07303085Homo sapiens677
75GCA_017963525.1Lactiplantibacillus plantarumXSBN-10SAMN18607046-677
76GCA_020844685.1Lactiplantibacillus plantarumFUA3302SAMN21227964-677
77GCA_025189965.1Lactiplantibacillus plantarumCIRM-BIA 653SAMN10365483-677
78GCA_025190025.1Lactiplantibacillus plantarumCIRM-BIA 1108SAMN10365478-677
79GCA_026127685.1Lactiplantibacillus plantarumFUA3302SAMN21845655-677
80GCA_001484005.1Lactiplantibacillus plantarumLZ95SAMN03854682Homo sapiens678
81GCA_002249825.1Lactiplantibacillus plantarumA6SAMN04445749-678
82GCA_003589725.1Lactiplantibacillus plantarumZFM55SAMN07305427Homo sapiens678
83GCA_034333585.1Lactiplantibacillus plantarumcqf-43SAMN37720970sow feces678
84GCA_034422915.1Lactiplantibacillus plantarumYW2189SAMN38636266Homo sapiens678
85GCA_034478365.1Lactiplantibacillus plantarumS034-52w-2SAMN38650131Homo sapiens678
86GCA_046736505.1Lactiplantibacillus plantarumCVASU2SAMN44971013Gallus gallus678
87GCA_001444495.1Lactiplantibacillus plantarumCRL 1506SAMN04266587goat679
88GCA_001540925.1Lactiplantibacillus plantarumLp1610SAMN03702584bovine679
89GCA_022810685.1Lactiplantibacillus plantarumSCB0151SAMN22106488Kefir grain679
90GCA_902825385.1Lactiplantibacillus plantarumCECT 9491SAMEA6538641Chenopodium quinoa679
91GCA_009756965.1Lactiplantibacillus plantarumBK-022SAMN11655668-680
92GCA_017576965.1Lactiplantibacillus plantarumKLDS1.0386SAMN18323758-680
93GCA_028321145.1Lactiplantibacillus plantarum1001216st1_A7_1001216B_150713SAMN31322640Homo sapiens680
94GCA_028321905.1Lactiplantibacillus plantarum1001216st1_H10_1001216B_150713SAMN31322642Homo sapiens680
95GCA_028323095.1Lactiplantibacillus plantarum1001216st1_B5_1001216B_150713SAMN31322641Homo sapiens680
96GCA_039725565.1Lactiplantibacillus plantarumDMDL 9010SAMN10081750-680
97GCA_001619295.1Lactiplantibacillus plantarumFBR6SAMN04382579-681
98GCA_004101625.1Lactiplantibacillus plantarumSRCM103418SAMN10743382-681
99GCA_014132175.1Lactiplantibacillus plantarum-SAMD00199036-681
100GCA_019599425.1Lactiplantibacillus plantarumJZ6SAMN20526383-681