Search results for phylogenetically related strains

 

Rank Compare Genome ID Species Strain BioSample ID Host Allelic distance ARGs VFs PGs PPRS
1GCA_049201625.1Lacticaseibacillus paracaseiUBLPc-87SAMN47217620-0
2GCA_003712565.1Lacticaseibacillus paracaseiFAM19317SAMN04088878-96
3GCA_016887785.1Lacticaseibacillus paracasei2306SAMN17562096-96
4GCA_026797475.1Lacticaseibacillus paracaseiCBP-1042SAMN27675067-98
5GCA_003712985.1Lacticaseibacillus paracaseiFAM8140SAMN04088895-100
6GCA_028878305.1Lacticaseibacillus paracaseiNRRL B-456SAMN23708197-100
7GCA_037283385.1Lacticaseibacillus paracaseiNRC_P4SAMN32629231cow100
8GCA_025190725.1Lacticaseibacillus paracaseiCIRM-BIA 699SAMN10365439-101
9GCA_000410195.1Lacticaseibacillus paracasei subsp. paracasei Lpp219Lpp219SAMN02469710Homo sapiens132
10GCA_030710015.1Lacticaseibacillus paracaseiULE721SAMN33593465-132
11GCA_000309665.1Lacticaseibacillus paracaseiM36SAMN02472000-150
12GCA_025190525.1Lacticaseibacillus paracaseiCIRM-BIA 1517SAMN10365450-162
13GCA_000309785.1Lacticaseibacillus paracaseiLpc-37SAMN02472013-184
14GCA_002148805.1Lacticaseibacillus paracaseiDPC4206SAMN06220137-184
15GCA_002148885.1Lacticaseibacillus paracaseiDPC4536SAMN06463780-184
16GCA_024498315.1Lacticaseibacillus paracaseiSMN-LBKSAMN29933592-184
17GCA_024622515.1Lacticaseibacillus paracaseiDSM 28675SAMN29593134Mus musculus184
18GCA_028320385.1Lacticaseibacillus paracasei1001270st1_F8_1001270H_150608SAMN31322638Homo sapiens184
19GCA_035586595.1Lacticaseibacillus paracaseiHP-B1337SAMN38922877-184
20GCA_036281375.1Lacticaseibacillus paracaseiCUL07ASAMN09708453-184
21GCA_040785095.1Lacticaseibacillus paracaseigbc_fSAMN41082101-184
22GCA_045808845.1Lacticaseibacillus paracaseiMSR2SAMN45146297-184
23GCA_049191845.1Lacticaseibacillus paracaseiIATA110SAMN45053973Homo sapiens184
24GCA_049205075.1Lacticaseibacillus paracaseiIATA109SAMN45053972Homo sapiens184
25GCA_003434205.1Lacticaseibacillus paracaseiAM33-2ACSAMN09736452Homo sapiens185
26GCA_041283745.2Lacticaseibacillus paracaseiORD 0998SAMN43000418Homo sapiens185
27GCA_016757675.1Lacticaseibacillus paracasei subsp. toleransS-NA5SAMN17359331-186
28GCA_016757695.1Lacticaseibacillus paracasei subsp. toleransS-NBSAMN17359333-186
29GCA_048282615.1Lacticaseibacillus paracasei439SAMN46889214-186
30GCA_000410235.1Lacticaseibacillus paracasei subsp. paracasei Lpp74Lpp74SAMN02469728-201
31GCA_000410055.1Lacticaseibacillus paracasei subsp. paracasei Lpp227Lpp227SAMN02641494Homo sapiens204
32GCA_003712245.1Lacticaseibacillus paracaseiFAM18108SAMN04088862-244
33GCA_037414215.1Lacticaseibacillus paracaseiLPC100SAMN39212581Homo sapiens246
34GCA_025190565.1Lacticaseibacillus paracaseiCIRM-BIA 2128SAMN10365446-247
35GCA_003712965.1Lacticaseibacillus paracaseiFAM6410SAMN04088893-253
36GCA_041117985.1Lacticaseibacillus paracaseiMYA5SAMN42930119-285
37GCA_026967245.1Lacticaseibacillus paracaseiLpc_yogurt_B6SAMN32062179-286
38GCA_041679805.1Lacticaseibacillus paracaseiAPYSAMN41163063Homo sapiens287
39GCA_026967195.1Lacticaseibacillus paracaseiLpc_yogurt_B5SAMN32062178-288
40GCA_026967205.1Lacticaseibacillus paracaseiLpc_yogurt_B4SAMN32062177-288
41GCA_026967275.1Lacticaseibacillus paracaseiLpc_yogurt_B3SAMN32062176-288
42GCA_026967295.1Lacticaseibacillus paracaseiLpc_yogurt_B2SAMN32062175-288
43GCA_009996805.1Lacticaseibacillus paracaseiD3-5SAMN13905290Homo sapiens289
44GCA_004141835.1Lacticaseibacillus paracaseiSRCM103299SAMN10849469-292
45GCA_000410015.1Lacticaseibacillus paracasei subsp. paracasei Lpp221Lpp221SAMN02469717Homo sapiens299
46GCA_015693945.1Lacticaseibacillus paracasei subsp. toleransZY-1SAMN16861159-301
47GCA_016890245.1Lacticaseibacillus paracaseiYT170SAMN17818118Rex rabbit331
48GCA_042015765.1Lacticaseibacillus paracaseiZJUZ2-3SAMN43503360Homo sapiens337
49GCA_019990865.1Lacticaseibacillus paracaseicek-R2SAMN21367938beet338
50GCA_008369945.1Lacticaseibacillus paracaseiDTA93SAMN12661681Homo sapiens343
51GCA_015476175.1Lacticaseibacillus paracasei subsp. toleransMGB0747SAMN16668663-344
52GCA_015476195.1Lacticaseibacillus paracasei subsp. toleransMGB0761SAMN16668817-345
53GCA_002904305.1Lacticaseibacillus paracaseiCCC B1205SAMN03813856-348
54GCA_001244395.1Lacticaseibacillus paracaseiL9SAMN03853751Homo sapiens350
55GCA_017638905.1Lacticaseibacillus paracaseiHL182SAMN18236778Homo sapiens354
56GCA_025757505.1Lacticaseibacillus paracaseiNG-LCU-ST2SAMN31037893Maize354
57GCA_030480425.1Lacticaseibacillus paracaseiL14SAMN33263285-356
58GCA_009931715.1Lacticaseibacillus paracaseiCACC 566SAMN13871807Canine357
59GCA_012955485.1Lacticaseibacillus paracasei347-16SAMN13259076Homo sapiens357
60GCA_013307125.1Lacticaseibacillus paracaseiLp02SAMN11489091Homo sapiens357
61GCA_028322945.1Lacticaseibacillus paracasei1001295st1_G5_1001295H_181012SAMN31322639Homo sapiens357
62GCA_029906365.1Lacticaseibacillus paracasei subsp. paracaseiMI3SAMN34106059Homo sapiens357
63GCA_024637915.1Lacticaseibacillus paracaseiVHProbi F11SAMN27160580Homo sapiens358
64GCA_026013725.1Lacticaseibacillus paracaseiATG-E1SAMN31433209Hono sapiens358
65GCA_037283365.1Lacticaseibacillus paracaseiNRC_P5SAMN32629232buffalo358
66GCA_037283435.1Lacticaseibacillus paracaseiNRC_P6SAMN32629233buffalo358
67GCA_037283545.1Lacticaseibacillus paracaseiNRC_P3SAMN32629230cow358
68GCA_003966835.1Lacticaseibacillus paracasei-SAMD00094822-359
69GCA_003640765.1Lacticaseibacillus paracaseiUBLPC-35SAMN10147909-365
70GCA_000410455.1Lacticaseibacillus paracasei subsp. paracasei Lpp43Lpp43SAMN02469725-367
71GCA_028878105.1Lacticaseibacillus paracaseiTMW 1.300SAMN23708206-367
72GCA_008329845.1Lacticaseibacillus paracasei10266SAMN09874024Homo sapiens369
73GCA_034044075.1Lacticaseibacillus paracaseiMP11ASAMN37950489-373
74GCA_029625355.1Lacticaseibacillus paracaseiVHProbi OF10SAMN26144441-381
75GCA_007637635.1Lacticaseibacillus paracaseiNJSAMN12319598-383
76GCA_036430865.1Lacticaseibacillus paracaseiFI11579SAMN33193087-388
77GCA_025252385.1Lacticaseibacillus paracaseiVHProbi O44SAMN30550144Homo sapiens409
78GCA_046939035.1Lacticaseibacillus paracasei subsp. paracaseiM587ASAMN35847929wild boar414
79GCA_000410075.1Lacticaseibacillus paracasei subsp. paracasei CNCM I-4648CNCM I-4648SAMN03177793-420
80GCA_032229185.1Lacticaseibacillus paracaseiNC4SAMN37472141-420
81GCA_036431975.1Lacticaseibacillus paracaseiCMAN-SucSAMN35624267-424
82GCA_000309685.1Lacticaseibacillus paracaseiT71499SAMN02472001Homo sapiens438
83GCA_036762895.1Lacticaseibacillus paracasei1311_IL3157SAMN37904766animal442
84GCA_030360845.1Lacticaseibacillus paracaseiTOM.1339SAMN35776905-443
85GCA_036432035.1Lacticaseibacillus paracaseiLMAN-KhSAMN35624263-453
86GCA_002079285.1Lacticaseibacillus paracaseiIIASAMN04571918-460
87GCA_002257625.1Lacticaseibacillus paracaseiTK1501SAMN05921089-470
88GCA_028609725.1Lacticaseibacillus paracaseiCLP-C10SAMN14677579-487
89GCA_003712785.1Lacticaseibacillus paracaseiFAM6161SAMN04088891-489
90GCA_000410435.1Lacticaseibacillus paracasei subsp. paracasei CNCM I-4649CNCM I-4649SAMN02469704-490
91GCA_012932835.1Lacticaseibacillus paracaseiCRF28SAMN05660651-491
92GCA_044990665.1Lacticaseibacillus paracaseiFNCPS K7SAMN44657157-492
93GCA_003713005.1Lacticaseibacillus paracaseiFAM7821SAMN04088894-493
94GCA_015319235.1Lacticaseibacillus paracasei subsp. toleransMGB0543SAMN16657553-493
95GCA_030361365.1Lacticaseibacillus paracaseiTOM.9SAMN35776875-494
96GCA_001895185.1Lacticaseibacillus paracasei-SAMD00029052-495
97GCA_012932815.1Lacticaseibacillus paracaseiUW1SAMN05660434-501
98GCA_000309645.1Lacticaseibacillus paracaseiCRF28SAMN02472005Homo sapiens503
99GCA_004078565.1Lacticaseibacillus paracaseiSRCM103424SAMN10743383-504
100GCA_008868525.1Lacticaseibacillus paracaseiBIO5452SAMN12856540-518