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Rank	Genome ID	Species	Strain	BioSample ID	Host	Allelic distance	ARGs	VFs	PGs	PPRS
1	GCA_901971765.1	Limosilactobacillus reuteri	INIA P572	SAMEA5674231	Sus scrofa domesticus	0	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
2	GCA_046938415.1	Limosilactobacillus reuteri subsp. suis	M755A	SAMN35847968	domestic pig	232	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
3	GCA_046938395.1	Limosilactobacillus reuteri subsp. suis	M744A	SAMN35847965	domestic pig	234	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
4	GCA_000236455.2	Limosilactobacillus reuteri subsp. suis	ATCC 53608	SAMEA2272605	-	235	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
5	GCA_046938015.1	Limosilactobacillus reuteri subsp. suis	M826A	SAMN35847958	domestic pig	235	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
6	GCA_046938365.1	Limosilactobacillus reuteri subsp. suis	M758A	SAMN35847971	domestic pig	237	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
7	GCA_046938445.1	Limosilactobacillus reuteri subsp. suis	M746A	SAMN35847966	domestic pig	241	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
8	GCA_046937955.1	Limosilactobacillus reuteri subsp. suis	M832A	SAMN35847964	domestic pig	245	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
9	GCA_046937795.1	Limosilactobacillus reuteri subsp. suis	M963A	SAMN35847961	domestic pig	246	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
10	GCA_046938495.1	Limosilactobacillus reuteri subsp. suis	M733A	SAMN35847963	domestic pig	246	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
11	GCA_046938595.1	Limosilactobacillus reuteri subsp. suis	M721A	SAMN35847959	domestic pig	247	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
12	GCA_036903235.1	Limosilactobacillus reuteri	TPC32	SAMN39454010	Tibetan pigs	248	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
13	GCA_046937845.1	Limosilactobacillus reuteri subsp. suis	M978A	SAMN35847967	domestic pig	248	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
14	GCA_046938025.1	Limosilactobacillus reuteri subsp. suis	M824A	SAMN35847956	domestic pig	248	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
15	GCA_046937655.1	Limosilactobacillus reuteri subsp. suis	M984A	SAMN35847973	domestic pig	249	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
16	GCA_046938245.1	Limosilactobacillus reuteri subsp. suis	M751A	SAMN35847969	domestic pig	249	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
17	GCA_046937715.1	Limosilactobacillus reuteri subsp. suis	M990A	SAMN35847974	domestic pig	250	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
18	GCA_046937975.1	Limosilactobacillus reuteri subsp. suis	M825A	SAMN35847957	domestic pig	250	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
19	GCA_046938255.1	Limosilactobacillus reuteri subsp. suis	M767A	SAMN35847975	domestic pig	250	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
20	GCA_036621875.1	Limosilactobacillus reuteri	lp167-67	SAMEA3220430	-	251	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
21	GCA_046938195.1	Limosilactobacillus reuteri subsp. suis	M774A	SAMN35847979	domestic pig	253	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
22	GCA_003719715.1	Limosilactobacillus reuteri	UBLRU-87	SAMN10246080	-	254	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
23	GCA_013348825.1	Limosilactobacillus reuteri	AN417	SAMN15162791	Sus scrofa domesticus	255	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
24	GCA_026183435.1	Limosilactobacillus reuteri	BRD_L17	SAMN31580343	Canis lupus familiaris mixed breed	255	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
25	GCA_046937825.1	Limosilactobacillus reuteri subsp. suis	M838A	SAMN35847977	domestic pig	255	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
26	GCA_046937815.1	Limosilactobacillus reuteri subsp. suis	M966A	SAMN35847962	domestic pig	256	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
27	GCA_046938155.1	Limosilactobacillus reuteri subsp. suis	M778A	SAMN35847980	domestic pig	256	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
28	GCA_002128755.1	Limosilactobacillus reuteri	KLR2006	SAMN05751488	pig	261	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
29	GCA_046938475.1	Limosilactobacillus reuteri subsp. suis	M726A	SAMN35847960	domestic pig	261	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
30	GCA_023896335.1	Limosilactobacillus reuteri	PH-3	SAMN28100809	-	264	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
31	GCA_045037805.1	Limosilactobacillus reuteri	ZY15	SAMN44596808	swine	264	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
32	GCA_046938095.1	Limosilactobacillus reuteri subsp. suis	M833A	SAMN35847970	domestic pig	265	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
33	GCA_002128615.1	Limosilactobacillus reuteri	KLR3002	SAMN05751492	pig	267	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
34	GCA_046938205.1	Limosilactobacillus reuteri subsp. suis	M773A	SAMN35847978	domestic pig	267	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
35	GCA_002128495.1	Limosilactobacillus reuteri	KLR2001	SAMN05751483	pig	268	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
36	GCA_002128585.1	Limosilactobacillus reuteri	KLR2003	SAMN05751485	pig	268	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
37	GCA_022586935.1	Limosilactobacillus reuteri	PB2	SAMN26510415	-	268	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
38	GCA_036621915.1	Limosilactobacillus reuteri	pg-3b	SAMEA3220433	-	269	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
39	GCA_002128635.1	Limosilactobacillus reuteri	KLR3003	SAMN05751493	pig	270	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
40	GCA_002128555.1	Limosilactobacillus reuteri	KLR2002	SAMN05751484	pig	271	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
41	GCA_002128605.1	Limosilactobacillus reuteri	KLR2007	SAMN05751489	pig	271	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
42	GCA_002128745.1	Limosilactobacillus reuteri	KLR2008	SAMN05751490	pig	271	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
43	GCA_042464795.1	Limosilactobacillus reuteri	LDHa	SAMN43886048	-	271	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
44	GCA_042464815.1	Limosilactobacillus reuteri	LSHe	SAMN43882269	-	271	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
45	GCA_046938175.1	Limosilactobacillus reuteri subsp. suis	M770A	SAMN35847976	domestic pig	271	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
46	GCA_002128655.1	Limosilactobacillus reuteri	KLR3004	SAMN05751494	pig	272	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
47	GCA_002128715.1	Limosilactobacillus reuteri	KLR2004	SAMN05751486	pig	273	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
48	GCA_020412465.1	Limosilactobacillus reuteri	19-E-6	SAMN21920643	Sus scrofa	273	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
49	GCA_020412485.1	Limosilactobacillus reuteri	19-E-3	SAMN21920642	Sus scrofa	273	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
50	GCA_000410995.1	Limosilactobacillus reuteri I5007	I5007	SAMN02603119	pigs	278	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
51	GCA_002128525.1	Limosilactobacillus reuteri	KLR1004	SAMN05751482	pig	278	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
52	GCA_001889975.1	Limosilactobacillus reuteri	121	SAMN05788099	pig	280	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
53	GCA_002128705.1	Limosilactobacillus reuteri	KLR4001	SAMN05751497	pig	280	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
54	GCA_020785075.1	Limosilactobacillus reuteri	G_6_1	SAMN22258624	Gorilla	281	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
55	GCA_002128685.1	Limosilactobacillus reuteri	KLR3005	SAMN05751495	pig	282	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
56	GCA_006874665.1	Limosilactobacillus reuteri	YSJL-12	SAMN09453118	pig	283	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
57	GCA_020784205.1	Limosilactobacillus reuteri	AG_2_7_1	SAMN22258666	Agile Gibbon	285	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
58	GCA_002027295.1	Limosilactobacillus reuteri	CECT8605	SAMN06473517	Bos taurus	286	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
59	GCA_020784235.1	Limosilactobacillus reuteri	LTM_Sauna_2_1	SAMN22258668	Lion-tailed Macaque	288	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
60	GCA_020784945.1	Limosilactobacillus reuteri	6C	SAMN22258631	Mandrill	288	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
61	GCA_020784975.1	Limosilactobacillus reuteri	6B	SAMN22258630	Mandrill	288	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
62	GCA_020785215.1	Limosilactobacillus reuteri	21D	SAMN22258617	Japanese macaque	288	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
63	GCA_020785225.1	Limosilactobacillus reuteri	21B	SAMN22258616	Japanese macaque	288	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
64	GCA_020785275.1	Limosilactobacillus reuteri	21A	SAMN22258615	Japanese macaque	288	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
65	GCA_001618905.1	Limosilactobacillus reuteri	ZLR003	SAMN03879966	pig	290	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
66	GCA_002128485.1	Limosilactobacillus reuteri	KLR1001	SAMN05751479	pig	295	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
67	GCA_020784845.1	Limosilactobacillus reuteri	MR2	SAMN22258637	Monkey	296	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
68	GCA_020784315.1	Limosilactobacillus reuteri	O_Tuki_6_1	SAMN22258669	Orangutan	298	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
69	GCA_020784835.1	Limosilactobacillus reuteri	MR6	SAMN22258638	Monkey	299	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
70	GCA_020784715.1	Limosilactobacillus reuteri	O_Tuki_7_1	SAMN22258642	Orangutan	300	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
71	GCA_020784755.1	Limosilactobacillus reuteri	O_Ruby_9_1	SAMN22258641	Orangutan	300	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
72	GCA_020785025.1	Limosilactobacillus reuteri	SM_1_4_1	SAMN22258628	Sulawesi Macaque	300	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
73	GCA_020785175.1	Limosilactobacillus reuteri	AG_2_6_1	SAMN22258619	Agile Gibbon	300	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
74	GCA_020785305.1	Limosilactobacillus reuteri	AG_1_1_1	SAMN22258618	Agile Gibbon	300	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
75	GCA_020784775.1	Limosilactobacillus reuteri	O_Ruby_8_1	SAMN22258640	Orangutan	301	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
76	GCA_046937645.1	Limosilactobacillus reuteri subsp. suis	M981A	SAMN35847972	domestic pig	301	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
77	GCA_020785185.1	Limosilactobacillus reuteri	AG_3_1_1	SAMN22258620	Agile Gibbon	303	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
78	GCA_020784995.1	Limosilactobacillus reuteri	6A	SAMN22258629	Mandrill	304	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
79	GCA_012843635.1	Limosilactobacillus reuteri	WCA-386-APC-4I	SAMN14558267	Sus scrofa domesticus	305	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
80	GCA_002128515.1	Limosilactobacillus reuteri	KLR1002	SAMN05751480	pig	341	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
81	GCA_002128765.1	Limosilactobacillus reuteri	KLR3006	SAMN05751496	pig	345	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
82	GCA_030262475.1	Limosilactobacillus reuteri	BIO7251	SAMN35621297	-	686	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
83	GCA_009649595.1	Limosilactobacillus reuteri	AD23	SAMN13186398	rat	687	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
84	GCA_020784455.1	Limosilactobacillus reuteri	FUA 3048	SAMN22258655	Rat	687	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
85	GCA_024622285.1	Limosilactobacillus reuteri	DSM 28673	SAMN29593145	Mus musculus	688	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
86	GCA_024622315.1	Limosilactobacillus reuteri	DSM 100191	SAMN29593143	Mus musculus	688	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
87	GCA_020785095.1	Limosilactobacillus reuteri	LTM_Jesus_1_1	SAMN22258625	Lion-tailed Macaque	689	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
88	GCA_002253625.1	Limosilactobacillus reuteri	609i	SAMN06848403	mouse	690	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
89	GCA_002253665.1	Limosilactobacillus reuteri	609l	SAMN06848404	mouse	690	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
90	GCA_002253705.1	Limosilactobacillus reuteri	609d	SAMN06848401	mouse	690	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
91	GCA_002253725.1	Limosilactobacillus reuteri	601g	SAMN06848399	mouse	690	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
92	GCA_002253835.1	Limosilactobacillus reuteri	114g	SAMN06848392	mouse	690	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
93	GCA_002253865.1	Limosilactobacillus reuteri	114q	SAMN06848394	mouse	690	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
94	GCA_002253925.1	Limosilactobacillus reuteri	107k	SAMN06848387	mouse	690	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
95	GCA_002254035.1	Limosilactobacillus reuteri	107e	SAMN06848385	mouse	690	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
96	GCA_009649105.1	Limosilactobacillus reuteri	100-93	SAMN13186396	mouse	690	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
97	GCA_002253685.1	Limosilactobacillus reuteri	609e	SAMN06848402	mouse	691	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
98	GCA_002253745.1	Limosilactobacillus reuteri	601l	SAMN06848400	mouse	691	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
99	GCA_002253825.1	Limosilactobacillus reuteri	114h	SAMN06848393	mouse	691	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score
100	GCA_002253955.1	Limosilactobacillus reuteri	107j	SAMN06848386	mouse	691	Antimicrobial resistance genes	Virulence factors	Pathogenic genes	Probiotic potential risk score

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