GCA_047460855.1 - 6 region(s) - antiSMASH results

Identified secondary metabolite regions using strictness 'relaxed'

gnlProkkaJJPBDDGL_5 (original name was: gnl|Prokka|JJPBDDGL_5)

Region	Type	From	To	Most similar known cluster		Similarity
Region 5.1	T3PKS	1,951	43,117

gnlProkkaJJPBDDGL_7 (original name was: gnl|Prokka|JJPBDDGL_7)

Region	Type	From	To	Most similar known cluster		Similarity
Region 7.1	RiPP-like	75,557	87,653	quinolidomicin A	Polyketide	3%

gnlProkkaJJPBDDGL_8 (original name was: gnl|Prokka|JJPBDDGL_8)

Region	Type	From	To	Most similar known cluster		Similarity
Region 8.1	lassopeptide	23,069	47,285	cochonodin I	RiPP	100%
Region 8.2	LAP,thiopeptide	51,373	83,303

gnlProkkaJJPBDDGL_11 (original name was: gnl|Prokka|JJPBDDGL_11)

Region	Type	From	To	Most similar known cluster		Similarity
Region 11.1	RiPP-like	80,431	96,046

gnlProkkaJJPBDDGL_36 (original name was: gnl|Prokka|JJPBDDGL_36)

Region	Type	From	To	Most similar known cluster		Similarity
Region 36.1	lanthipeptide-class-ii	1	5,360

Region	Type	From	To	Most similar known cluster	Similarity
Region 5.1	T3PKS	1,951	43,117
Region 7.1	RiPP-like	75,557	87,653	quinolidomicin A	Polyketide	3%
Region 8.1	lassopeptide	23,069	47,285	cochonodin I	RiPP	100%
Region 8.2	LAP,thiopeptide	51,373	83,303
Region 11.1	RiPP-like	80,431	96,046
Region 36.1	lanthipeptide-class-ii	1	5,360

Compact view

gnlProkkaJJPBDDGL_5 - Region 1 - T3PKS

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Location: 1,951 - 43,117 nt. (total: 41,167 nt) Show pHMM detection rules used

T3PKS: (Chal_sti_synt_C or Chal_sti_synt_N)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

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Gene overview

KnownClusterBlast

Gene/CDS overview

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Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.

gnlProkkaJJPBDDGL_7 - Region 1 - RiPP-like

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Location: 75,557 - 87,653 nt. (total: 12,097 nt) Show pHMM detection rules used

RiPP-like: (strepbact or Antimicrobial14 or Bacteriocin_IId or BacteriocIIc_cy or Bacteriocin_II or Bacteriocin_IIi or Lactococcin or Antimicrobial17 or Lactococcin_972 or Bacteriocin_IIc or LcnG-beta or Cloacin or Linocin_M18 or TIGR03651 or TIGR03693 or TIGR03601 or TIGR03795 or TIGR03975 or DUF692 or TIGR01193 or (YcaO or TIGR03604))

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

Gene overview

KnownClusterBlast

Gene/CDS overview

Filter:

Automatically zoom to filtered/selected features

Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

gnlProkkaJJPBDDGL_8 - Region 1 - lassopeptide

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Location: 23,069 - 47,285 nt. (total: 24,217 nt) Show pHMM detection rules used

lassopeptide: (PF13471 and Asn_synthase or micJ25 or mcjC)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

Select a gene to view the details available for it

Gene overview

KnownClusterBlast

Lasso peptides

Gene/CDS overview

Filter:

Automatically zoom to filtered/selected features

Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

Lasso peptide predictions

Lassopeptide(s) for ctg8_26

ctg8_26

Leader:

MNYTKPVIEKISTFKSGTS

Full core:

GLVAGRFRDIFGGRALFLIRI

Putative macrolactam:

GLVAGRFRD

antiSMASH-DB 4.0 matches for ctg8_26

100.0% NZ_JADPFA010000001.1: Lassopeptides: I4U27_RS10200_lassopeptide

1

GLVAGRFRDIFGGRALFLIRI

21

GLVAGRFRDIFGGRALFLIRI

1

GLVAGRFRDIFGGRALFLIRI

21

95.2% NZ_FILX01000006.1and 2 others:

NZ_JAGFUY010000013.1 Lassopeptides: J5652_RS05355_lassopeptideNZ_JAGFVF010000023.1 Lassopeptides: J5568_RS09760_lassopeptide

Lassopeptides: A1363_RS11380_lassopeptide

1

GLVAGRFRDIFGGRALFLIRI

21

GLVAG FRDIFGGRALFLIRI

1

GLVAGSFRDIFGGRALFLIRI

21

65.2% NC_012468.1and 9 others:

NZ_CGXY01000023.1 Lassopeptides: AQD87_RS12295_lassopeptideNZ_CLXO01000005.1 Lassopeptides: AFA99_RS11895_lassopeptideNZ_CMLU01000007.1 Lassopeptides: AEP96_RS12330_lassopeptideNZ_CP014326.1 Lassopeptides: AXK38_RS11095_lassopeptideNZ_CRCU01000004.1 Lassopeptides: AYW54_RS12245_lassopeptideNZ_FDQP01000002.1 Lassopeptides: A1S42_RS12075_lassopeptideNZ_FHTX02000015.1 Lassopeptides: A0693_RS10110_lassopeptideNZ_FZBS01000003.1 Lassopeptides: CFY35_RS11490_lassopeptideNZ_RXXR01000008.1 Lassopeptides: EKA98_RS05595_lassopeptide

Lassopeptides: SP70585_RS13230_lassopeptide

1

GLVAGRFRDIFGGRALFLIRI

21

GL G+FRDIFGGRA+ IRI

1

GLWTGKFRDIFGGRAIVRIRI

21

with 23 more sequence matches

65.2% NZ_BJED01000004.1: Lassopeptides: FFR60_RS05785_lassopeptide

1

GLVAGRFRDIFGGRALFLIRI

21

GL G+FRD+FGGRALF I I

1

GLWTGKFRDVFGGRALFQIVI

21

60.9% NC_021023.1and 25 others:

NZ_CABGPX010000005.1 Lassopeptides: FN189_RS04890_lassopeptideNZ_CABGTR010000001.1 Lassopeptides: FN307_RS01775_lassopeptideNZ_CABGXT010000046.1 Lassopeptides: FN373_RS15575_lassopeptideNZ_CP045045.1 Lassopeptides: F9293_RS05110_lassopeptideNZ_CP046111.1 Lassopeptides: GKQ56_RS05625_lassopeptideNZ_CP063980.1 Lassopeptides: ISN59_RS06410_lassopeptideNZ_CP097069.1 Lassopeptides: M2912_RS09265_lassopeptideNZ_CP110068.1 Lassopeptides: OLM02_RS09865_lassopeptideNZ_CP116962.1 Lassopeptides: PO880_RS04740_lassopeptideNZ_GG670372.1 Lassopeptides: EFDG_RS21040_lassopeptideNZ_GL457197.1 Lassopeptides: HMPREF9517_RS19205_lassopeptideNZ_JADOEP010000002.1 Lassopeptides: IW492_RS01515_lassopeptideNZ_JADPEP010000046.1 Lassopeptides: I4U96_RS13395_lassopeptideNZ_JTKS01000001.1 Lassopeptides: QI17_RS14045_lassopeptideNZ_JTKX01000023.1 Lassopeptides: QR19_RS15990_lassopeptideNZ_KB932331.1 Lassopeptides: Q9A_RS18260_lassopeptideNZ_KB944632.1 Lassopeptides: WMI_RS18340_lassopeptideNZ_KB944658.1 Lassopeptides: WMM_RS18400_lassopeptideNZ_KB944694.1 Lassopeptides: WO3_RS18855_lassopeptideNZ_KB944828.1 Lassopeptides: WOM_RS18345_lassopeptideNZ_KE351156.1 Lassopeptides: D924_RS19170_lassopeptideNZ_KE352620.1 Lassopeptides: D350_RS18085_lassopeptideNZ_NAQY01000001.1 Lassopeptides: B6A11_RS15210_lassopeptideNZ_SCHR01000003.1 Lassopeptides: EQ847_RS03410_lassopeptideNZ_SMGV01000009.1 Lassopeptides: EYY48_RS11015_lassopeptide

Lassopeptides: ENT_RS07390_lassopeptide

1

GLVAGRFRDIFGGRALFLIRI

21

GL G+FRD+FGGRALF + I

1

GLWTGKFRDVFGGRALFQVVI

21

60.9% NZ_NCVL01000001.1and 1 other:

NZ_VMMF01000036.1 Lassopeptides: HT717_RS09510_lassopeptide

Lassopeptides: B7694_RS10650_lassopeptide

1

GLVAGRFRDIFGGRALFLIRI

21

GL G+F DIFGGRA+F I I

1

GLWFGKFTDIFGGRAVFQIVI

21

56.5% NZ_JADPFA010000001.1: Lassopeptides: I4U27_RS00440_lassopeptide

1

GLVAGRFRDIFGGRALFLIRI

21

GL G FRD+FGGRA+ +RI

1

GLWTGNFRDVFGGRAIVRVRI

21

52.4% NZ_CP106992.1: Lassopeptides: NDS46_RS23370_lassopeptide

1

GLVAGRFRDIFGGRALFLIR

20

GL G+F+D+FGGRA+ I

1

GLWTGKFKDLFGGRAVIKIE

20

52.2% NZ_AULE01000001.1: Lassopeptides: H509_RS27430_lassopeptide

1

GLVAGRFRDIFGGRALFLIRI

21

GL G++ D+FGGRAL I I

1

GLWTGKYTDVFGGRALIKIII

21

52.2% NZ_FILX01000006.1and 1 other:

NZ_JAGFVF010000023.1 Lassopeptides: allorf_10827_10955_lassopeptide

Lassopeptides: allorf_42148_42276_lassopeptide

1

GLVAGRFRDIFGGRALFLIRI

21

GL G+FRD+FGGRA+ + I

1

GLWTGKFRDVFGGRAIVRVTI

21

52.2% NZ_KI912489.1: Lassopeptides: allorf_514087_514215_lassopeptide

1

GLVAGRFRDIFGGRALFLIRI

21

GL G++ DIFGGRA+ I I

1

GLCFGKWNDIFGGRAIIKIEI

21

52.2% NZ_KI912489.1: Lassopeptides: allorf_514674_514802_lassopeptide

1

GLVAGRFRDIFGGRALFLIRI

21

GL G++ DIFGGRA+ I I

1

GLWTGKWTDIFGGRAIIKIEI

21

50.0% NZ_CP053549.1: Lassopeptides: HMI60_RS00570_lassopeptide

1

GLVAGRFRDIFGGRALFLIRI

21

G+ GR+RDIFGGRA + +

1

GVWFGRWRDIFGGRAFVKVDV

21

50.0% NZ_JADKSM010000003.1and 2 others:

NZ_PSXX01000017.1 Lassopeptides: C5E05_RS18625_lassopeptideNZ_PSXZ01000003.1 Lassopeptides: C5E07_RS02640_lassopeptide

Lassopeptides: ITJ61_RS18070_lassopeptide

1

GLVAGRFRDIFGGRALFLIRI

21

G+ GR+RDIFGGRA + +

1

GVWFGRWRDIFGGRAFIKVTV

21

47.6% NZ_JAMDLY010000010.1and 4 others:

NZ_JAPDMW010000034.1 Lassopeptides: OF778_RS29475_lassopeptideNZ_JMLT01000016.1 Lassopeptides: BP95_RS33025_lassopeptideNZ_LS992241.1 Lassopeptides: PBLR_RS07315_lassopeptideNZ_SADY01000011.1 Lassopeptides: C7Y44_RS26425_lassopeptide

Lassopeptides: M5X04_RS09885_lassopeptide

1

GLVAGRFRDIFGGRAL

16

G+ GR+RD+ GGRAL

1

GIWFGRYRDVLGGRAL

16

45.5% NZ_KI912489.1: Lassopeptides: allorf_513617_513742_lassopeptide

1

GLVAGRFRDIFGGRALF

17

GL G+FRDIFG + F

1

GLWYGKFRDIFGAKTYF

17

42.9% NZ_CP118615.1: Lassopeptides: PVK37_RS09555_lassopeptide

8

RDIFGGRALFLIR

20

RDIFG RAL +I

8

RDIFGYRALIVIH

20

42.9% NZ_KI912489.1: Lassopeptides: allorf_513868_514041_lassopeptide

1

GLVAGRFRDIFGGRALFLIR

20

G+ G++ DIFGGRA +

1

GVWFGKWTDIFGGRAFIHVE

20

39.1% NZ_FNCN01000047.1: Lassopeptides: BLQ73_RS31810_lassopeptide

4

AGRFRDIFGGRALFLIR

20

+ R RDI G RAL +I

4

SARERDILGFRALIVIH

20

38.1% NZ_JABBWU010000001.1: Lassopeptides: HHX30_RS02470_lassopeptide

1

GLVAGRFRDIFGGRAL

16

G +RDIFGGR

1

GYPWWDYRDIFGGRTF

16

38.1% NZ_LITU01000056.1: Lassopeptides: AMS66_RS32315_lassopeptide

1

GLVAGRFRDIFGGRALFLIR

20

G AG++ D++GG+A I

1

GFFAGKWTDVYGGKAFVRIE

20

38.1% NZ_NGKY01000001.1: Lassopeptides: A5819_RS19010_lassopeptide

1

GLVAGRFRDIFGGRALFLI

19

G+ GR++D+FGG+A +

1

GVWFGRWKDVFGGKAFIAV

19

33.3% NZ_NCVC01000017.1: Lassopeptides: B7703_RS09865_lassopeptide

4

AGRFRDIFGGRALFLIR

20

R RD+ G RAL +I

4

TARERDLLGFRALIVIH

20

28.6% NZ_FTNI01000001.1: Lassopeptides: allorf_119291_119425_lassopeptide

1

GLVAGRFRDIFGGRAL

16

G +RD+FGG

1

GYPWWDYRDLFGGHTF

16

27.3% NZ_KE951412.1: Lassopeptides: allorf_43700_43828_lassopeptide

5

GRFRDIFGGR

14

GR+ D +GGR

5

GRWNDYYGGR

14

23.8% NZ_JAJQQQ010000018.1: Lassopeptides: LUZ28_RS25695_lassopeptide

8

RDIFGGRALF

17

+DI GG+ L

7

KDILGGKQLL

16

Lassopeptide(s) for ctg8_27

ctg8_27

Leader:

MKYCKPTFEPIATFKKDTK

Full core:

GLWTGNFRDVFGGRAIVRVRIEF

Putative macrolactam:

GLWTGNFRD

antiSMASH-DB 4.0 matches for ctg8_27

100.0% NZ_JADPFA010000001.1: Lassopeptides: I4U27_RS00440_lassopeptide

1

GLWTGNFRDVFGGRAIVRVRIEF

23

GLWTGNFRDVFGGRAIVRVRIEF

1

GLWTGNFRDVFGGRAIVRVRIEF

23

91.3% NZ_FILX01000006.1and 1 other:

NZ_JAGFVF010000023.1 Lassopeptides: allorf_10827_10955_lassopeptide

Lassopeptides: allorf_42148_42276_lassopeptide

1

GLWTGNFRDVFGGRAIVRVRIEF

23

GLWTG FRDVFGGRAIVRV IEF

1

GLWTGKFRDVFGGRAIVRVTIEF

23

87.0% NC_012468.1and 9 others:

NZ_CGXY01000023.1 Lassopeptides: AQD87_RS12295_lassopeptideNZ_CLXO01000005.1 Lassopeptides: AFA99_RS11895_lassopeptideNZ_CMLU01000007.1 Lassopeptides: AEP96_RS12330_lassopeptideNZ_CP014326.1 Lassopeptides: AXK38_RS11095_lassopeptideNZ_CRCU01000004.1 Lassopeptides: AYW54_RS12245_lassopeptideNZ_FDQP01000002.1 Lassopeptides: A1S42_RS12075_lassopeptideNZ_FHTX02000015.1 Lassopeptides: A0693_RS10110_lassopeptideNZ_FZBS01000003.1 Lassopeptides: CFY35_RS11490_lassopeptideNZ_RXXR01000008.1 Lassopeptides: EKA98_RS05595_lassopeptide

Lassopeptides: SP70585_RS13230_lassopeptide

1

GLWTGNFRDVFGGRAIVRVRIEF

23

GLWTG FRD+FGGRAIVR+RIEF

1

GLWTGKFRDIFGGRAIVRIRIEF

23

with 22 more sequence matches

69.6% NC_021023.1and 25 others:

NZ_CABGPX010000005.1 Lassopeptides: FN189_RS04890_lassopeptideNZ_CABGTR010000001.1 Lassopeptides: FN307_RS01775_lassopeptideNZ_CABGXT010000046.1 Lassopeptides: FN373_RS15575_lassopeptideNZ_CP045045.1 Lassopeptides: F9293_RS05110_lassopeptideNZ_CP046111.1 Lassopeptides: GKQ56_RS05625_lassopeptideNZ_CP063980.1 Lassopeptides: ISN59_RS06410_lassopeptideNZ_CP097069.1 Lassopeptides: M2912_RS09265_lassopeptideNZ_CP110068.1 Lassopeptides: OLM02_RS09865_lassopeptideNZ_CP116962.1 Lassopeptides: PO880_RS04740_lassopeptideNZ_GG670372.1 Lassopeptides: EFDG_RS21040_lassopeptideNZ_GL457197.1 Lassopeptides: HMPREF9517_RS19205_lassopeptideNZ_JADOEP010000002.1 Lassopeptides: IW492_RS01515_lassopeptideNZ_JADPEP010000046.1 Lassopeptides: I4U96_RS13395_lassopeptideNZ_JTKS01000001.1 Lassopeptides: QI17_RS14045_lassopeptideNZ_JTKX01000023.1 Lassopeptides: QR19_RS15990_lassopeptideNZ_KB932331.1 Lassopeptides: Q9A_RS18260_lassopeptideNZ_KB944632.1 Lassopeptides: WMI_RS18340_lassopeptideNZ_KB944658.1 Lassopeptides: WMM_RS18400_lassopeptideNZ_KB944694.1 Lassopeptides: WO3_RS18855_lassopeptideNZ_KB944828.1 Lassopeptides: WOM_RS18345_lassopeptideNZ_KE351156.1 Lassopeptides: D924_RS19170_lassopeptideNZ_KE352620.1 Lassopeptides: D350_RS18085_lassopeptideNZ_NAQY01000001.1 Lassopeptides: B6A11_RS15210_lassopeptideNZ_SCHR01000003.1 Lassopeptides: EQ847_RS03410_lassopeptideNZ_SMGV01000009.1 Lassopeptides: EYY48_RS11015_lassopeptide

Lassopeptides: ENT_RS07390_lassopeptide

1

GLWTGNFRDVFGGRAIVRVRIEF

23

GLWTG FRDVFGGRA+ +V I +

1

GLWTGKFRDVFGGRALFQVVIYY

23

65.2% NZ_BJED01000004.1: Lassopeptides: FFR60_RS05785_lassopeptide

1

GLWTGNFRDVFGGRAIVRVRIEF

23

GLWTG FRDVFGGRA+ ++ I +

1

GLWTGKFRDVFGGRALFQIVIYY

23

60.9% NZ_KI912489.1: Lassopeptides: allorf_514674_514802_lassopeptide

1

GLWTGNFRDVFGGRAIVRVRIEF

23

GLWTG + D+FGGRAI+++ I F

1

GLWTGKWTDIFGGRAIIKIEIGF

23

56.5% NZ_AULE01000001.1: Lassopeptides: H509_RS27430_lassopeptide

1

GLWTGNFRDVFGGRAIVRVRIE

22

GLWTG + DVFGGRA++++ I+

1

GLWTGKYTDVFGGRALIKIIIQ

22

56.5% NZ_FILX01000006.1and 2 others:

NZ_JAGFUY010000013.1 Lassopeptides: J5652_RS05355_lassopeptideNZ_JAGFVF010000023.1 Lassopeptides: J5568_RS09760_lassopeptide

Lassopeptides: A1363_RS11380_lassopeptide

1

GLWTGNFRDVFGGRAIVRVRI

21

GL G+FRD+FGGRA+ +RI

1

GLVAGSFRDIFGGRALFLIRI

21

56.5% NZ_JADPFA010000001.1: Lassopeptides: I4U27_RS10200_lassopeptide

1

GLWTGNFRDVFGGRAIVRVRI

21

GL G FRD+FGGRA+ +RI

1

GLVAGRFRDIFGGRALFLIRI

21

52.2% NZ_CP053549.1: Lassopeptides: HMI60_RS00570_lassopeptide

1

GLWTGNFRDVFGGRAIVRVRI

21

G+W G +RD+FGGRA V+V +

1

GVWFGRWRDIFGGRAFVKVDV

21

52.2% NZ_CP106992.1: Lassopeptides: NDS46_RS23370_lassopeptide

1

GLWTGNFRDVFGGRAIVRVR

20

GLWTG F+D+FGGRA++++

1

GLWTGKFKDLFGGRAVIKIE

20

52.2% NZ_KI912489.1: Lassopeptides: allorf_514087_514215_lassopeptide

1

GLWTGNFRDVFGGRAIVRVRIEF

23

GL G + D+FGGRAI+++ I F

1

GLCFGKWNDIFGGRAIIKIEIGF

23

52.2% NZ_NCVL01000001.1and 1 other:

NZ_VMMF01000036.1 Lassopeptides: HT717_RS09510_lassopeptide

Lassopeptides: B7694_RS10650_lassopeptide

1

GLWTGNFRDVFGGRAIVRVRIEF

23

GLW G F D+FGGRA+ ++ I +

1

GLWFGKFTDIFGGRAVFQIVINY

23

47.8% NZ_JADKSM010000003.1and 2 others:

NZ_PSXX01000017.1 Lassopeptides: C5E05_RS18625_lassopeptideNZ_PSXZ01000003.1 Lassopeptides: C5E07_RS02640_lassopeptide

Lassopeptides: ITJ61_RS18070_lassopeptide

1

GLWTGNFRDVFGGRAIVRVRI

21

G+W G +RD+FGGRA ++V +

1

GVWFGRWRDIFGGRAFIKVTV

21

47.8% NZ_JAMDLY010000010.1and 4 others:

NZ_JAPDMW010000034.1 Lassopeptides: OF778_RS29475_lassopeptideNZ_JMLT01000016.1 Lassopeptides: BP95_RS33025_lassopeptideNZ_LS992241.1 Lassopeptides: PBLR_RS07315_lassopeptideNZ_SADY01000011.1 Lassopeptides: C7Y44_RS26425_lassopeptide

Lassopeptides: M5X04_RS09885_lassopeptide

1

GLWTGNFRDVFGGRAIVRV

19

G+W G +RDV GGRA+ R+

1

GIWFGRYRDVLGGRALTRI

19

43.5% NZ_KI912489.1: Lassopeptides: allorf_513868_514041_lassopeptide

1

GLWTGNFRDVFGGRAIVRVR

20

G+W G + D+FGGRA + V

1

GVWFGKWTDIFGGRAFIHVE

20

43.5% NZ_NGKY01000001.1: Lassopeptides: A5819_RS19010_lassopeptide

1

GLWTGNFRDVFGGRAIVRV

19

G+W G ++DVFGG+A + V

1

GVWFGRWKDVFGGKAFIAV

19

39.1% NZ_KI912489.1: Lassopeptides: allorf_513617_513742_lassopeptide

1

GLWTGNFRDVFGGRAIVRV

19

GLW G FRD+FG + +

1

GLWYGKFRDIFGAKTYFNL

19

39.1% NZ_LITU01000056.1: Lassopeptides: AMS66_RS32315_lassopeptide

1

GLWTGNFRDVFGGRAIVRVR

20

G + G + DV+GG+A VR+

1

GFFAGKWTDVYGGKAFVRIE

20

34.8% NZ_CP062951.1and 1 other:

NZ_CP071248.1 Lassopeptides: BLI009_RS05010_lassopeptide

Lassopeptides: BL1347_RS03935_lassopeptide

1

GLWTGNFRDVFGGRA

15

G+W GN+ DV G +A

1

GVWFGNYVDVGGAKA

15

34.8% NZ_KE951412.1: Lassopeptides: allorf_43700_43828_lassopeptide

1

GLWTGNFRDVFGGRAIVRV

19

G W G + D +GGR +R+

1

GGWRGRWNDYYGGRYGLRI

19

30.4% NZ_CP118615.1: Lassopeptides: PVK37_RS09555_lassopeptide

1

GLWTGNFRDVFGGRAIVRVR

20

L + + RD+FG RA++ +

1

SLGSADERDIFGYRALIVIH

20

26.1% NZ_JABBWU010000001.1: Lassopeptides: HHX30_RS02470_lassopeptide

6

NFRDVFGGRAIV

17

++RD+FGGR +

6

DYRDIFGGRTFI

17

21.7% NZ_FTNI01000001.1: Lassopeptides: allorf_119291_119425_lassopeptide

6

NFRDVFGGRAIV

17

++RD+FGG +

6

DYRDLFGGHTFI

17

20.7% NZ_KE384107.1and 1 other:

NZ_KE384107.1 Lanthipeptides: G586_RS0119020_lanthipeptide

Lanthipeptides: G586_RS0119020_lanthipeptide

3

WTGNFRDVFGGRAI

16

W GN FG R +

2

WYGNLEHFFGHRDL

15

Legend:

Dha: Didehydroalanine
Dhb: Didehydrobutyrine

Lasso peptides

Core peptide predictions

ctg8_26 - Class II: Cleavage pHMM score: -8.10; RODEO score: 18; Monoisotopic mass: 2328.4 Da; Molecular weight: 2329.8 Da; Number of bridges: 0
ctg8_27 - Class II: Cleavage pHMM score: -8.80; RODEO score: 16; Monoisotopic mass: 2646.4 Da; Molecular weight: 2648.0 Da; Number of bridges: 0

gnlProkkaJJPBDDGL_8 - Region 2 - LAP,thiopeptide

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Location: 51,373 - 83,303 nt. (total: 31,931 nt) Show pHMM detection rules used

LAP: ((((goadsporin_like or PF00881 or TIGR03605) and (YcaO or TIGR03604)) or TIGR03882 or TIGR03603 or TIGR03602) and not cyanobactin_synth)
thiopeptide: ((YcaO or TIGR03604) and ((thio_amide and (PF06968 or PF04055 or PF07366)) or Lant_dehydr_C or Lant_dehydr_N or PF07366 or PF06968 or PF04055) or thiostrepton)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

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Gene overview

KnownClusterBlast

Thiopeptides

Gene/CDS overview

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Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.

Thiopeptide predictions

No core peptides found.

Thiopeptides

Core peptide predictions

No core peptides found.

gnlProkkaJJPBDDGL_11 - Region 1 - RiPP-like

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Location: 80,431 - 96,046 nt. (total: 15,616 nt) Show pHMM detection rules used

Region on contig edge.

RiPP-like: (strepbact or Antimicrobial14 or Bacteriocin_IId or BacteriocIIc_cy or Bacteriocin_II or Bacteriocin_IIi or Lactococcin or Antimicrobial17 or Lactococcin_972 or Bacteriocin_IIc or LcnG-beta or Cloacin or Linocin_M18 or TIGR03651 or TIGR03693 or TIGR03601 or TIGR03795 or TIGR03975 or DUF692 or TIGR01193 or (YcaO or TIGR03604))

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

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Gene overview

KnownClusterBlast

Gene/CDS overview

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Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.

gnlProkkaJJPBDDGL_36 - Region 1 - lanthipeptide-class-ii

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Location: 1 - 5,360 nt. (total: 5,360 nt) Show pHMM detection rules used

Region on contig edge.

lanthipeptide-class-ii: cds(LANC_like and DUF4135)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

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Gene overview

KnownClusterBlast

Lanthipeptides

Gene/CDS overview

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Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.

Lanthipeptide predictions

Lanthipeptides - No core peptides found.

Lanthipeptides

Core peptide predictions

No core peptides found.