Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 1 | 0 | 0 | 1.00 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| JAHHBJLL_125 | 511 | 2484 | tet(Q) | ARO:3000191 | tet(Q) | 98.93 | 100.00 | Z21523.1 |
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| JAHHBJLL_125 | 559 | 2484 | tet(Q) | Doxycycline, Tetracycline, Minocycline | 99.22 | 100.00 | Z21523 |
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| JAHHBJLL_125 | 559 | 2481 | tet(Q) | tetracycline resistance ribosomal protection protein Tet(Q) | BLASTX | 99.06 | 100.00 | WP_002560998.1 |
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| JAHHBJLL_141 | 1833 | 2505 | repUS2 | 675 / 681 | 91.70 | BFU30316 |
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| JAHHBJLL_1 | 0.0 | 1.0 | 0.0 |
| JAHHBJLL_2 | 0.0 | 1.0 | 0.0 |
| JAHHBJLL_3 | 1.0 | 0.0 | 1.0 |
| JAHHBJLL_5 | 1.0 | 0.0 | 1.0 |
| JAHHBJLL_6 | 0.0 | 1.0 | 0.0 |
| JAHHBJLL_7 | 0.0 | 1.0 | 0.0 |
| JAHHBJLL_8 | 0.0 | 1.0 | 0.0 |
| JAHHBJLL_9 | 0.0 | 1.0 | 0.0 |
| JAHHBJLL_10 | 0.0 | 1.0 | 0.0 |
| JAHHBJLL_11 | 0.0 | 1.0 | 0.0 |
| JAHHBJLL_12 | 0.0 | 1.0 | 0.0 |
| JAHHBJLL_13 | 0.0 | 1.0 | 0.0 |
| JAHHBJLL_14 | 1.0 | 0.0 | 1.0 |
| JAHHBJLL_15 | 0.0 | 1.0 | 0.0 |
| JAHHBJLL_16 | 0.0 | 1.0 | 0.0 |
| JAHHBJLL_17 | 1.0 | 0.0 | 1.0 |
| JAHHBJLL_18 | 1.0 | 0.0 | 1.0 |
| JAHHBJLL_19 | 1.0 | 0.0 | 1.0 |
| JAHHBJLL_20 | 0.0 | 1.0 | 0.0 |
| JAHHBJLL_21 | 1.0 | 0.0 | 1.0 |
| JAHHBJLL_22 | 0.0 | 1.0 | 0.0 |
| JAHHBJLL_23 | 1.0 | 0.0 | 1.0 |
| JAHHBJLL_24 | 0.0 | 1.0 | 0.0 |
| JAHHBJLL_25 | 0.0 | 1.0 | 0.0 |
| JAHHBJLL_26 | 0.0 | 1.0 | 0.0 |
| JAHHBJLL_28 | 1.0 | 0.0 | 1.0 |
| JAHHBJLL_35 | 0.0 | 1.0 | 0.0 |
| JAHHBJLL_46 | 0.0 | 1.0 | 0.0 |
| JAHHBJLL_57 | 0.0 | 1.0 | 0.0 |
| JAHHBJLL_58 | 0.0 | 1.0 | 0.0 |
| JAHHBJLL_59 | 0.0 | 1.0 | 0.0 |
| JAHHBJLL_60 | 0.0 | 1.0 | 0.0 |
| JAHHBJLL_61 | 0.0 | 1.0 | 0.0 |
| JAHHBJLL_62 | 0.0 | 1.0 | 0.0 |
| JAHHBJLL_63 | 0.0 | 1.0 | 0.0 |
| JAHHBJLL_64 | 0.0 | 1.0 | 0.0 |
| JAHHBJLL_65 | 0.0 | 1.0 | 0.0 |
| JAHHBJLL_66 | 0.0 | 1.0 | 0.0 |
| JAHHBJLL_67 | 0.0 | 1.0 | 0.0 |
| JAHHBJLL_68 | 0.0 | 1.0 | 0.0 |
| JAHHBJLL_69 | 0.0 | 1.0 | 0.0 |
| JAHHBJLL_70 | 0.0 | 1.0 | 0.0 |
| JAHHBJLL_71 | 0.0 | 1.0 | 0.0 |
| JAHHBJLL_72 | 0.0 | 1.0 | 0.0 |
| JAHHBJLL_73 | 0.0 | 1.0 | 0.0 |
| JAHHBJLL_74 | 0.0 | 1.0 | 0.0 |
| JAHHBJLL_75 | 0.0 | 1.0 | 0.0 |
| JAHHBJLL_76 | 0.0 | 1.0 | 0.0 |
| JAHHBJLL_77 | 0.0 | 1.0 | 0.0 |
| JAHHBJLL_78 | 0.0 | 1.0 | 0.0 |
| JAHHBJLL_79 | 0.0 | 1.0 | 0.0 |
| JAHHBJLL_80 | 0.0 | 1.0 | 0.0 |
| JAHHBJLL_81 | 0.0 | 1.0 | 0.0 |
| JAHHBJLL_82 | 0.0 | 1.0 | 0.0 |
| JAHHBJLL_83 | 0.0 | 1.0 | 0.0 |
| JAHHBJLL_84 | 0.0 | 1.0 | 0.0 |
| JAHHBJLL_85 | 0.0 | 1.0 | 0.0 |
| JAHHBJLL_86 | 0.0 | 1.0 | 0.0 |
| JAHHBJLL_87 | 0.0 | 1.0 | 0.0 |
| JAHHBJLL_88 | 0.0 | 1.0 | 0.0 |
| JAHHBJLL_89 | 1.0 | 0.0 | 1.0 |
| JAHHBJLL_90 | 0.0 | 1.0 | 0.0 |
| JAHHBJLL_91 | 0.0 | 1.0 | 0.0 |
| JAHHBJLL_92 | 0.0 | 1.0 | 0.0 |
| JAHHBJLL_93 | 0.0 | 1.0 | 0.0 |
| JAHHBJLL_94 | 0.0 | 1.0 | 0.0 |
| JAHHBJLL_95 | 0.0 | 1.0 | 0.0 |
| JAHHBJLL_96 | 0.0 | 1.0 | 0.0 |
| JAHHBJLL_97 | 1.0 | 0.0 | 1.0 |
| JAHHBJLL_98 | 0.0 | 1.0 | 0.0 |
| JAHHBJLL_99 | 1.0 | 0.0 | 1.0 |
| JAHHBJLL_100 | 0.0 | 1.0 | 0.0 |
| JAHHBJLL_101 | 1.0 | 0.0 | 1.0 |
| JAHHBJLL_102 | 0.0 | 1.0 | 0.0 |
| JAHHBJLL_103 | 0.0 | 1.0 | 0.0 |
| JAHHBJLL_104 | 0.0 | 1.0 | 0.0 |
| JAHHBJLL_105 | 0.0 | 1.0 | 0.0 |
| JAHHBJLL_106 | 0.0 | 1.0 | 0.0 |
| JAHHBJLL_107 | 0.0 | 1.0 | 0.0 |
| JAHHBJLL_108 | 0.0 | 1.0 | 0.0 |
| JAHHBJLL_109 | 1.0 | 0.0 | 1.0 |
| JAHHBJLL_110 | 0.0 | 1.0 | 0.0 |
| JAHHBJLL_111 | 0.0 | 1.0 | 0.0 |
| JAHHBJLL_112 | 0.0 | 1.0 | 0.0 |
| JAHHBJLL_113 | 1.0 | 0.0 | 1.0 |
| JAHHBJLL_114 | 1.0 | 0.0 | 1.0 |
| JAHHBJLL_115 | 0.0 | 1.0 | 0.0 |
| JAHHBJLL_116 | 0.0 | 1.0 | 0.0 |
| JAHHBJLL_117 | 0.0 | 1.0 | 0.0 |
| JAHHBJLL_118 | 1.0 | 0.0 | 1.0 |
| JAHHBJLL_119 | 1.0 | 0.0 | 1.0 |
| JAHHBJLL_120 | 1.0 | 0.0 | 1.0 |
| JAHHBJLL_121 | 0.0 | 1.0 | 0.0 |
| JAHHBJLL_122 | 0.0 | 1.0 | 0.0 |
| JAHHBJLL_123 | 1.0 | 0.0 | 1.0 |
| JAHHBJLL_124 | 1.0 | 0.0 | 1.0 |
| JAHHBJLL_125 | 0.0 | 1.0 | 0.0 |
| JAHHBJLL_126 | 1.0 | 0.0 | 1.0 |
| JAHHBJLL_127 | 1.0 | 0.0 | 1.0 |
| JAHHBJLL_128 | 0.0 | 1.0 | 0.0 |
| JAHHBJLL_129 | 1.0 | 0.0 | 1.0 |
| JAHHBJLL_130 | 1.0 | 0.0 | 1.0 |
| JAHHBJLL_131 | 0.0 | 1.0 | 0.0 |
| JAHHBJLL_132 | 0.0 | 1.0 | 0.0 |
| JAHHBJLL_133 | 0.0 | 1.0 | 0.0 |
| JAHHBJLL_134 | 0.0 | 1.0 | 0.0 |
| JAHHBJLL_135 | 0.0 | 1.0 | 0.0 |
| JAHHBJLL_136 | 0.0 | 1.0 | 0.0 |
| JAHHBJLL_137 | 0.0 | 1.0 | 0.0 |
| JAHHBJLL_138 | 0.0 | 1.0 | 0.0 |
| JAHHBJLL_139 | 0.0 | 1.0 | 0.0 |
| JAHHBJLL_140 | 0.0 | 1.0 | 0.0 |
| JAHHBJLL_141 | 1.0 | 0.0 | 1.0 |
| JAHHBJLL_142 | 0.0 | 1.0 | 0.0 |
| JAHHBJLL_143 | 0.0 | 1.0 | 0.0 |
| JAHHBJLL_144 | 0.0 | 1.0 | 0.0 |
| JAHHBJLL_145 | 0.0 | 1.0 | 0.0 |
| JAHHBJLL_146 | 0.0 | 1.0 | 0.0 |
| JAHHBJLL_147 | 1.0 | 0.0 | 1.0 |
| JAHHBJLL_148 | 0.0 | 1.0 | 0.0 |
| JAHHBJLL_149 | 1.0 | 0.0 | 1.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| JAHHBJLL_62 | 82923 | 89309 | False | Unknown | VOG7407, |
| JAHHBJLL_74 | 13188 | 20732 | False | Siphoviridae | VOG7238, |
Phigaro v2.4.0 (Database: Jan. 2024 release)