| Genus | Species | Number of isolates |
|---|---|---|
| Akkermansia | Akkermansia massiliensis | 13 |
| Akkermansia muciniphila | 940 | |
| Alistipes | Alistipes shahii | 44 |
| Anaerobutyricum | Anaerobutyricum hallii | 60 |
| Bacteroides | Bacteroides fragilis | 575 |
| Bacteroides ovatus | 432 | |
| Bacteroides thetaiotaomicron | 855 | |
| Bacteroides uniformis | 647 | |
| Bacteroides xylanisolvens | 244 | |
| Blautia | Blautia producta | 21 |
| Blautia wexlerae | 189 | |
| Faecalibacterium | Faecalibacterium prausnitzii | 136 |
| Parabacteroides | Parabacteroides distasonis | 567 |
| Parabacteroides goldsteinii | 216 | |
| Parabacteroides merdae | 193 | |
| Phocaeicola | Phocaeicola dorei | 276 |
| Roseburia | Roseburia hominis | 36 |
| Roseburia intestinalis | 58 | |
| Ruminococcus | Ruminococcus bromii | 106 |
| Total | 5608 |
Last update：Jun 16th, 2025